Does population size affect genetic diversity? A test with sympatric lizard species.

Abstract:

:Genetic diversity is a fundamental requirement for evolution and adaptation. Nonetheless, the forces that maintain patterns of genetic variation in wild populations are not completely understood. Neutral theory posits that genetic diversity will increase with a larger effective population size and the decreasing effects of drift. However, the lack of compelling evidence for a relationship between genetic diversity and population size in comparative studies has generated some skepticism over the degree that neutral sequence evolution drives overall patterns of diversity. The goal of this study was to measure genetic diversity among sympatric populations of related lizard species that differ in population size and other ecological factors. By sampling related species from a single geographic location, we aimed to reduce nuisance variance in genetic diversity owing to species differences, for example, in mutation rates or historical biogeography. We compared populations of zebra-tailed lizards and western banded geckos, which are abundant and short-lived, to chuckwallas and desert iguanas, which are less common and long-lived. We assessed population genetic diversity at three protein-coding loci for each species. Our results were consistent with the predictions of neutral theory, as the abundant species almost always had higher levels of haplotype diversity than the less common species. Higher population genetic diversity in the abundant species is likely due to a combination of demographic factors, including larger local population sizes (and presumably effective population sizes), faster generation times and high rates of gene flow with other populations.

journal_name

Heredity (Edinb)

journal_title

Heredity

authors

Hague MT,Routman EJ

doi

10.1038/hdy.2015.76

subject

Has Abstract

pub_date

2016-01-01 00:00:00

pages

92-8

issue

1

eissn

0018-067X

issn

1365-2540

pii

hdy201576

journal_volume

116

pub_type

杂志文章

相关文献

HEREDITY文献大全
  • Genetic relationships within the genus Beta determined using both PCR-based marker and DNA sequencing techniques.

    abstract::The sequences of ITS1 of the internal transcribed spacer regions of nuclear ribosomal DNA from 11 species or subspecies in four sections of the genus Beta were compared. Phylogeny of these wild beet taxa was inferred from the sequence data using phenetic and phylogenetic analyses. Multiple accessions from the same 11 ...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.1998.00332.x

    authors: Shen Y,Ford-Lloyd BV,Newbury HJ

    更新日期:1998-05-01 00:00:00

  • Comparative mRNA and miRNA expression in European mouflon (Ovis musimon) and sheep (Ovis aries) provides novel insights into the genetic mechanisms for female reproductive success.

    abstract::Prolific breeds of domestic sheep (Ovis aries) are important genetic resources due to their reproductive performance, which is characterized by multiple lambs per birth and out-of-season breeding. However, the lack of a comprehensive understanding of the genetic mechanisms underlying the important reproductive traits,...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-018-0090-1

    authors: Yang J,Li X,Cao YH,Pokharel K,Hu XJ,Chen ZH,Xu SS,Peippo J,Honkatukia M,Kantanen J,Li MH

    更新日期:2019-02-01 00:00:00

  • Impact of deleterious mutations, sexually antagonistic selection, and mode of recombination suppression on transitions between male and female heterogamety.

    abstract::Deleterious mutations accumulating on non-recombining Y chromosomes can drive XY to XY turnovers, as they allow to replace the old mutation-loaded Y by a new mutation-free one. The same process is thought to prevent XY to ZW turnovers, because the latter requires fixation of the ancestral Y, assuming dominance of the ...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-019-0225-z

    authors: Saunders PA,Neuenschwander S,Perrin N

    更新日期:2019-09-01 00:00:00

  • Maternal-by-environment but not genotype-by-environment interactions in a fish without parental care.

    abstract::The impact of environmental conditions on the expression of genetic variance and on maternal effects variance remains an important question in evolutionary quantitative genetics. We investigate here the effects of early environment on variation in seven adult life history, morphological, and secondary sexual traits (i...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-017-0029-y

    authors: Vega-Trejo R,Head ML,Jennions MD,Kruuk LEB

    更新日期:2018-01-01 00:00:00

  • Coupling estimated effects of QTLs for physiological traits to a crop growth model: predicting yield variation among recombinant inbred lines in barley.

    abstract::Advances in the use of molecular markers to elucidate the inheritance of quantitative traits enable the integration of genetic information on physiological traits into crop growth models. The objective of this study was to assess the ability of a crop growth model with QTL-based estimates of physiological input parame...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2000.00790.x

    authors: Yin X,Chasalow SD,Dourleijn CJ,Stam P,Kropff MJ

    更新日期:2000-12-01 00:00:00

  • Population genetic structure of the endangered freshwater crayfish Austropotamobius pallipes, assessed using RAPD markers.

    abstract::Random amplified polymorphic DNA (RAPD) analysis was performed to characterize the genetic diversity of Austropotamobius pallipes, a threatened freshwater crayfish native to Europe. Four decamer primers which generated six unambiguous polymorphic bands were used to analyse crayfish from 21 populations sampled in the m...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2001.00909.x

    authors: Gouin N,Grandjean F,Bouchon D,Reynolds JD,Souty-Grosset C

    更新日期:2001-07-01 00:00:00

  • Targeted conservation genetics of the endangered chimpanzee.

    abstract::Populations of the common chimpanzee (Pan troglodytes) are in an impending risk of going extinct in the wild as a consequence of damaging anthropogenic impact on their natural habitat and illegal pet and bushmeat trade. Conservation management programmes for the chimpanzee have been established outside their natural r...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-020-0313-0

    authors: Frandsen P,Fontsere C,Nielsen SV,Hanghøj K,Castejon-Fernandez N,Lizano E,Hughes D,Hernandez-Rodriguez J,Korneliussen TS,Carlsen F,Siegismund HR,Mailund T,Marques-Bonet T,Hvilsom C

    更新日期:2020-08-01 00:00:00

  • Evolution of the mitochondrial control region in Palaearctic brown trout (Salmo trutta) populations: the biogeographical role of the Iberian Peninsula.

    abstract::In order to extend present knowledge of brown trout phylogeography in the Palaearctic, we analysed the complete mitochondrial D-loop sequence (1025-1027 bp) of all mitochondrial haplotypes of Salmo trutta found in the Iberian Peninsula and one North African haplotype. Sequence variation in the mitochondrial control re...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2001.00905.x

    authors: Suárez J,Bautista JM,Almodóvar A,Machordom A

    更新日期:2001-08-01 00:00:00

  • Effects of population disjunction on isozyme variation in the widespread Pilgerodendron uviferum.

    abstract::Geographical range is considered a good predictor of the levels of isozyme variation in plants. Widespread species, often consisting of historically larger and more continuous populations, maintain higher polymorphism and are less affected by drift, which tends to erode genetic variation in more geographically restric...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2001.00906.x

    authors: Premoli AC,Souto CP,Allnutt TR,Newton AC

    更新日期:2001-09-01 00:00:00

  • The complex genetic architecture of male mate choice evolution between Drosophila species.

    abstract::Mate choice behaviors are among the most important reproductive isolating barriers in many animals. Little is known about the genetic basis of reproductively isolating behaviors, but examples to date provide evidence that they can have a simple genetic basis. However, it is unclear if these results indicate that indiv...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-020-0309-9

    authors: Shahandeh MP,Turner TL

    更新日期:2020-06-01 00:00:00

  • Interval mapping for loci affecting unordered categorical traits.

    abstract::Many traits including shapes and colors of flowers, fruits and seeds in plants, as well as coat colors and some behavioral properties in animals, are recorded in discrete categories. If categories are ordered, genetic analyses of the categorical traits are often performed using the threshold model, which considers a l...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800783

    authors: Hayashi T,Awata T

    更新日期:2006-02-01 00:00:00

  • Chiasma frequency variation with altitude in Cepaea hortensis (můll.).

    abstract::Populations of Cepaea hortensis have been sampled from an area of 121 sq km on the north slopes of the Brendon Hills, Somerset, and analysed for chiasma frequency. Variation in chiasma frequency is due to variation in a single large bivalent--the A group bivalent. In 12 populations studied during 1973 no association b...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1975.86

    authors: Price DJ

    更新日期:1975-10-01 00:00:00

  • A quasi-equilibrium theory of the distribution of rare alleles in a subdivided population.

    abstract::The conditional average frequency of rare alleles has been shown in simulations to provide a simple and robust estimator of the number of individuals exchanged between local populations in an island model (Nm). This statistic is defined as the average frequency of an allele in those samples in which the allele is pres...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1986.63

    authors: Barton NH,Slatkin M

    更新日期:1986-06-01 00:00:00

  • Power law fitness landscapes and their ability to predict fitness.

    abstract::Whether or not evolution by natural selection is predictable depends on the existence of general patterns shaping the way mutations interact with the genetic background. This interaction, also known as epistasis, has been observed during adaptation (macroscopic epistasis) and in individual mutations (microscopic epist...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-018-0143-5

    authors: Passagem-Santos D,Zacarias S,Perfeito L

    更新日期:2018-11-01 00:00:00

  • A genetic analysis of reproductive barriers in Phacelia dubia.

    abstract::Investigations into the genetic basis of reproductive barriers among recognized and putative varieties in Phacelia dubia have provided evidence that even among closely related taxa, multiple pathways can lead to reproductive isolation. A nuclear-based reproductive barrier, expressed as partial hybrid sterility of both...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1991.97

    authors: Levy F

    更新日期:1991-12-01 00:00:00

  • Gene flow between arrhenotokous and thelytokous populations of Venturia canescens (Hymenoptera).

    abstract::In the solitary parasitoid wasp Venturia canescens both arrhenotokously (sexual) and thelytokously (parthenogenetical) reproducing individuals occur sympatrically. We found in the laboratory that thelytokous wasps are able to mate, receive and use sperm of arrhenotokous males. Using nuclear (amplified fragment length ...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/sj.hdy.6800245

    authors: Schneider MV,Driessen G,Beukeboom LW,Boll R,van Eunen K,Selzner A,Talsma J,Lapchin L

    更新日期:2003-03-01 00:00:00

  • Chromosomal polymorphism in Nucella lapillus.

    abstract::A technique for the examination of chromosomes in testicular material in Nucella lapillus is described. The diploid chromosome number varies between 26 and 36. Eight pairs of meatcentric chromosomes are always present and range in size from 9mu to 4mu. Additionally, 10 pairs of acrocentric chromosomes (4mu to 1mu) are...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1975.26

    authors: Bantock CR,Cockayne WC

    更新日期:1975-04-01 00:00:00

  • The evolutionary history of Drosophila buzzatii. XXXII. Linkage disequilibrium between allozymes and chromosome inversions in two colonizing populations.

    abstract::Chromosome polymorphism in Drosophila buzzatii is under selection but the genes responsible for the effect of the inversions of fitness are unknown. On the other hand, there is evidence for selection on several allozyme loci but the presence of paracentric inversions on the second chromosome, where most of the polymor...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1995.27

    authors: Betrán E,Quezada-Díaz JE,Ruiz A,Santos M,Fontdevila A

    更新日期:1995-02-01 00:00:00

  • Enhancing genetic disease control by selecting for lower host infectivity and susceptibility.

    abstract::Infectious diseases have a huge impact on animal health, production and welfare, and human health. Understanding the role of host genetics in disease spread is important for developing disease control strategies that efficiently reduce infection incidence and risk of epidemics. While heritable variation in disease sus...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-018-0176-9

    authors: Tsairidou S,Anacleto O,Woolliams JA,Doeschl-Wilson A

    更新日期:2019-06-01 00:00:00

  • Using mitochondrial DNA to test the hypothesis of a European post-glacial human recolonization from the Franco-Cantabrian refuge.

    abstract::It has been proposed that the distribution patterns and coalescence ages found in Europeans for mitochondrial DNA (mtDNA) haplogroups V, H1 and H3 are the result of a post-glacial expansion from a Franco-Cantabrian refuge that recolonized central and northern areas. In contrast, in this refined mtDNA study of the Cant...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2010.47

    authors: García O,Fregel R,Larruga JM,Álvarez V,Yurrebaso I,Cabrera VM,González AM

    更新日期:2011-01-01 00:00:00

  • Distinguishing the effects of selection from demographic history in the genetic variation of two sister passerines based on mitochondrial-nuclear comparison.

    abstract::Determining the mechanisms responsible for the distribution of genetic diversity in natural populations has occupied a central role in molecular evolution. Our study was motivated by the unprecedented observation that a widespread Eurasian flycatcher, Ficedula albicilla, exhibited no variation at the mitochondrial DNA...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2014.9

    authors: Hung CM,Zink RM

    更新日期:2014-07-01 00:00:00

  • pLARmEB: integration of least angle regression with empirical Bayes for multilocus genome-wide association studies.

    abstract::Multilocus genome-wide association studies (GWAS) have become the state-of-the-art procedure to identify quantitative trait nucleotides (QTNs) associated with complex traits. However, implementation of multilocus model in GWAS is still difficult. In this study, we integrated least angle regression with empirical Bayes...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2017.8

    authors: Zhang J,Feng JY,Ni YL,Wen YJ,Niu Y,Tamba CL,Yue C,Song Q,Zhang YM

    更新日期:2017-06-01 00:00:00

  • Models of parent-offspring conflict: effect of environmental variance.

    abstract::"Parent-offspring conflict" is a theoretical concept proposing that siblings are selected to be slightly more greedy with each other than parents are selected to tolerate. This paper extends a class of previous models of parent-offspring conflict by introducing a new and more realistic dimension to the analysis: the a...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1985.65

    authors: Bull JJ

    更新日期:1985-08-01 00:00:00

  • The effect of cultural transmission on continuous variation.

    abstract::Cultural transmission may depend on the non-genetic transfer of information from parent to offspring. The consequences of such cultural transmission for continuous variation are investigated theoretically for randomly mating populations. Cultural inheritance may act on genetical and environmental differences between i...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1976.64

    authors: Eaves L

    更新日期:1976-08-01 00:00:00

  • Evolution of adaptive phenotypic traits without positive Darwinian selection.

    abstract::Recent evidence suggests the frequent occurrence of a simple non-Darwinian (but non-Lamarckian) model for the evolution of adaptive phenotypic traits, here entitled the plasticity-relaxation-mutation (PRM) mechanism. This mechanism involves ancestral phenotypic plasticity followed by specialization in one alternative ...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2011.97

    authors: Hughes AL

    更新日期:2012-04-01 00:00:00

  • Wolbachia diversity in the Porcellionides pruinosus complex of species (Crustacea: Oniscidea): evidence for host-dependent patterns of infection.

    abstract::Porcellionides pruinosus is a cosmopolitan woodlouse. It is known to exhibit patterns of geographical variation between populations, and has been suspected to consist of several very closely related species. This species was found to carry Wolbachia endosymbionts, alpha-proteobacteria which are known to modify the rep...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1046/j.1365-2540.2001.00920.x

    authors: Michel-Salzat A,Cordaux R,Bouchon D

    更新日期:2001-10-01 00:00:00

  • Effects of demographic stochasticity and life-history strategies on times and probabilities to fixation.

    abstract::How life-history strategies influence the evolution of populations is not well understood. Most existing models stem from the Wright-Fisher model which considers discrete generations and a fixed population size, thus not taking into account any potential consequences of overlapping generations and demographic stochast...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/s41437-018-0118-6

    authors: Abu Awad D,Coron C

    更新日期:2018-10-01 00:00:00

  • Sex ratio theory in geographically structured populations.

    abstract::Equilibrium sex ratios have been determined analytically under Wright's island model in order to determine the effect of population structure with limited dispersal. When mating occurs before dispersal, the dispersal rate has little or no effect, and the equilibrium sex ratio remains the same as under complete dispers...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.1986.10

    authors: Bulmer MG

    更新日期:1986-02-01 00:00:00

  • Multiple genetic divergences and population expansions of a Mediterranean sandfly, Phlebotomus ariasi, in Europe during the Pleistocene glacial cycles.

    abstract::Phlebotomus ariasi is one of the two sandflies transmitting the causative agent of zoonotic leishmaniasis, Leishmania infantum, in France and Iberia, and provides a rare case study of the postglacial re-colonization of France by a Mediterranean species. Four DNA sequences were analysed-mitochondrial cytochrome b (cyt ...

    journal_title:Heredity

    pub_type: 历史文章,杂志文章

    doi:10.1038/hdy.2010.111

    authors: Mahamdallie SS,Pesson B,Ready PD

    更新日期:2011-05-01 00:00:00

  • Segregation distortion and the evolution of sex-determining mechanisms.

    abstract::Segregation distorters are alleles that distort normal segregation in their own favour. Sex chromosomal distorters lead to biased sex ratios, and the presence of such distorters, therefore, may induce selection for a change in the mechanism of sex determination. The evolutionary dynamics of distorter-induced changes i...

    journal_title:Heredity

    pub_type: 杂志文章

    doi:10.1038/hdy.2009.104

    authors: Kozielska M,Weissing FJ,Beukeboom LW,Pen I

    更新日期:2010-01-01 00:00:00