A genome-wide survey of sexually dimorphic expression of Drosophila miRNAs identifies the steroid hormone-induced miRNA let-7 as a regulator of sexual identity.

Abstract:

:MiRNAs bear an increasing number of functions throughout development and in the aging adult. Here we address their role in establishing sexually dimorphic traits and sexual identity in male and female Drosophila. Our survey of miRNA populations in each sex identifies sets of miRNAs differentially expressed in male and female tissues across various stages of development. The pervasive sex-biased expression of miRNAs generally increases with the complexity and sexual dimorphism of tissues, gonads revealing the most striking biases. We find that the male-specific regulation of the X chromosome is relevant to miRNA expression on two levels. First, in the male gonad, testis-biased miRNAs tend to reside on the X chromosome. Second, in the soma, X-linked miRNAs do not systematically rely on dosage compensation. We set out to address the importance of a sex-biased expression of miRNAs in establishing sexually dimorphic traits. Our study of the conserved let-7-C miRNA cluster controlled by the sex-biased hormone ecdysone places let-7 as a primary modulator of the sex-determination hierarchy. Flies with modified let-7 levels present doublesex-related phenotypes and express sex-determination genes normally restricted to the opposite sex. In testes and ovaries, alterations of the ecdysone-induced let-7 result in aberrant gonadal somatic cell behavior and non-cell-autonomous defects in early germline differentiation. Gonadal defects as well as aberrant expression of sex-determination genes persist in aging adults under hormonal control. Together, our findings place ecdysone and let-7 as modulators of a somatic systemic signal that helps establish and sustain sexual identity in males and females and differentiation in gonads. This work establishes the foundation for a role of miRNAs in sexual dimorphism and demonstrates that similar to vertebrate hormonal control of cellular sexual identity exists in Drosophila.

journal_name

Genetics

journal_title

Genetics

authors

Fagegaltier D,König A,Gordon A,Lai EC,Gingeras TR,Hannon GJ,Shcherbata HR

doi

10.1534/genetics.114.169268

subject

Has Abstract

pub_date

2014-10-01 00:00:00

pages

647-68

issue

2

eissn

0016-6731

issn

1943-2631

pii

genetics.114.169268

journal_volume

198

pub_type

杂志文章

相关文献

GENETICS文献大全
  • Unusual pattern of nucleotide sequence variation at the OS-E and OS-F genomic regions of Drosophila simulans.

    abstract::Nucleotide variation at the genomic region encompassing the odorant-binding protein genes OS-E and OS-F (OS region) was surveyed in two populations of Drosophila simulans, one from Europe and the other from Africa. We found that the European population shows an atypical and large haplotype structure, which extends thr...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.106.068015

    authors: Sánchez-Gracia A,Rozas J

    更新日期:2007-04-01 00:00:00

  • The effect of mutation and selection on codon adaptation in Escherichia coli bacteriophage.

    abstract::Studying phage codon adaptation is important not only for understanding the process of translation elongation, but also for reengineering phages for medical and industrial purposes. To evaluate the effect of mutation and selection on phage codon usage, we developed an index to measure selection imposed by host transla...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.162842

    authors: Chithambaram S,Prabhakaran R,Xia X

    更新日期:2014-05-01 00:00:00

  • A Genetic Screen for Pre-mRNA Splicing Mutants of Arabidopsis thaliana Identifies Putative U1 snRNP Components RBM25 and PRP39a.

    abstract::In a genetic screen for mutants showing modified splicing of an alternatively spliced GFP reporter gene in Arabidopsis thaliana, we identified mutations in genes encoding the putative U1 small nuclear ribonucleoprotein (snRNP) factors RBM25 and PRP39a. The latter has not yet been studied for its role in pre-messenger ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.117.300149

    authors: Kanno T,Lin WD,Fu JL,Chang CL,Matzke AJM,Matzke M

    更新日期:2017-12-01 00:00:00

  • High genetic diversity in the chemoreceptor superfamily of Caenorhabditis elegans.

    abstract::We investigated genetic polymorphism in the Caenorhabditis elegans srh and str chemoreceptor gene families, each of which consists of approximately 300 genes encoding seven-pass G-protein-coupled receptors. Almost one-third of the genes in each family are annotated as pseudogenes because of apparent functional defects...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.035329

    authors: Stewart MK,Clark NL,Merrihew G,Galloway EM,Thomas JH

    更新日期:2005-04-01 00:00:00

  • Partial selfing and linkage: the effect of a heterotic locus on a neutral locus.

    abstract::Equilibria are determined for the two-locus model in a partially selfing population when one locus is neutral and the other locus is heterotic. At an equilibrium point, the frequency of heterozygotes at the neutral locus is greater than that expected from one-locus theory, even if the heterotic locus is on a different...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Strobeck C

    更新日期:1979-05-01 00:00:00

  • Maximizing transcription efficiency causes codon usage bias.

    abstract::The rate of protein synthesis depends on both the rate of initiation of translation and the rate of elongation of the peptide chain. The rate of initiation depends on the encountering rate between ribosomes and mRNA; this rate in turn depends on the concentration of ribosomes and mRNA. Thus, patterns of codon usage th...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Xia X

    更新日期:1996-11-01 00:00:00

  • Different forces drive the evolution of the Acp26Aa and Acp26Ab accessory gland genes in the Drosophila melanogaster species complex.

    abstract::The Acp26Aa and Acp26Ab genes that code for male accessory gland proteins are tandemly arranged in the species of the Drosophila melanogaster complex. An approximately 1.6-kb region encompassing both genes has been sequenced in 10, 24, and 18 lines from Spain, Ivory Coast, and Malawi, respectively; the previously stud...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Aguadé M

    更新日期:1998-11-01 00:00:00

  • Associations between restriction site polymorphism and enzyme activity variation for esterase 6 in Drosophila melanogaster.

    abstract::Thirty-five nucleotide polymorphisms were found in a 21.5-kbp region including the Est6 locus among 42 isoallelic lines extracted from a single natural population of Drosophila melanogaster. The heterozygosity per nucleotide pair was estimated to be 0.010 overall, but was lower in sequences hybridizing to transcripts ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Game AY,Oakeshott JG

    更新日期:1990-12-01 00:00:00

  • DNA sequence evolution of the amylase multigene family in Drosophila pseudoobscura.

    abstract::The alpha-Amylase locus in Drosophila pseudoobscura is a multigene family of one, two or three copies on the third chromosome. The nucleotide sequences of the three Amylase genes from a single chromosome of D. pseudoobscura are presented. The three Amylase genes differ at about 0.5% of their nucleotides. Each gene has...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Brown CJ,Aquadro CF,Anderson WW

    更新日期:1990-09-01 00:00:00

  • Sequence-dependent gene conversion: can duplicated genes diverge fast enough to escape conversion?

    abstract::Conversion between duplicated genes limits their independent evolution. Models in which conversion frequencies decrease as genes diverge are examined to determine conditions under which genes can "escape" further conversion and hence escape from a gene family. A review of results from various recombination systems sug...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Walsh JB

    更新日期:1987-11-01 00:00:00

  • A Bayesian multilocus association method: allowing for higher-order interaction in association studies.

    abstract::For most common diseases with heritable components, not a single or a few single-nucleotide polymorphisms (SNPs) explain most of the variance for these disorders. Instead, much of the variance may be caused by interactions (epistasis) among multiple SNPs or interactions with environmental conditions. We present a new ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.107.071696

    authors: Albrechtsen A,Castella S,Andersen G,Hansen T,Pedersen O,Nielsen R

    更新日期:2007-06-01 00:00:00

  • Alleles of the hotspot cog are codominant in effect on recombination in the his-3 region of Neurospora.

    abstract::There are two naturally occurring functional alleles of the recombination hotspot cog, which is located 3.5 kb from the his-3 locus of Neurospora crassa. The presence of the cog+ allele in a cross significantly increases recombination in the his-3 region compared to a cross homozygous for the cog allele. Data obtained...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.103.025080

    authors: Yeadon PJ,Bowring FJ,Catcheside DE

    更新日期:2004-07-01 00:00:00

  • Genetic and molecular complexity of the position effect variegation modifier mod(mdg4) in Drosophila.

    abstract::mod(mdg4), also known as E(var)3-93D, is involved in a variety of processes, such as gene silencing in position effect variegation (PEV), the control of gypsy insulator sequences, regulation of homeotic gene expression, and programmed cell death. We have isolated a large number of mod(mdg4) cDNAs, representing 21 diff...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Büchner K,Roth P,Schotta G,Krauss V,Saumweber H,Reuter G,Dorn R

    更新日期:2000-05-01 00:00:00

  • Different Frequency in the Recovery of Crossover Products from Male and Female Gametes of Plants Hypoploid for B-a Translocations in Maize.

    abstract::The percentage of crossovers is consistently higher in plants hypoploid for six B-A translocations when crossed as males than when crossed as females; in most instances, this excess of male crossing over exceeds that found in control crosses (involving normal chromosomes). Thus, there seems to be something about the h...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Robertson DS

    更新日期:1984-05-01 00:00:00

  • An ancestral recombination graph for diploid populations with skewed offspring distribution.

    abstract::A large offspring-number diploid biparental multilocus population model of Moran type is our object of study. At each time step, a pair of diploid individuals drawn uniformly at random contributes offspring to the population. The number of offspring can be large relative to the total population size. Similar "heavily ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.112.144329

    authors: Birkner M,Blath J,Eldon B

    更新日期:2013-01-01 00:00:00

  • Regulation of mitotic spindle disassembly by an environmental stress-sensing pathway in budding yeast.

    abstract::Timely spindle disassembly is essential for coordination of mitotic exit with cytokinesis. In the budding yeast Saccharomyces cerevisiae, the microtubule-associated protein She1 functions in one of at least three parallel pathways that promote spindle disassembly. She1 phosphorylation by the Aurora kinase Ipl1 facilit...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.163238

    authors: Pigula A,Drubin DG,Barnes G

    更新日期:2014-11-01 00:00:00

  • Linkage Disequilibrium between Allozymes in Natural Populations of Lodgepole Pine.

    abstract::Pairwise linkage disequilibrium values (D) were estimated for 14 allozyme loci in two natural populations of lodgepole pine (Pinus contorta ssp. latifolia). Maternal multilocus genotypes were inferred from samples of (haploid) megagametophytic seed-endosperms. Coupling/repulsion double heterozygotes were distinguished...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Epperson BK,Allard RW

    更新日期:1987-02-01 00:00:00

  • Organization of the Rudimentary Wing Locus in DROSOPHILA MELANOGASTER. I. the Isolation and Partial Characterization of Mutants Induced with Ethyl Methanesulfonate, Icr-170 and X Rays.

    abstract::New rudimentary (r) mutants have been isolated following mutagenesis with ethyl methanesulfonate (r(LE)), ICR-170 (r(LI)) and X rays (r(LX)). From wing phenotype measurements on homoallelic females, it has been shown that the r(LE) mutant series includes several leaky alleles, as well as alleles that produce moderate ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Rawls JM,Porter LA

    更新日期:1979-09-01 00:00:00

  • The effect of attachment site mutations on strand exchange in bacteriophage lambda site-specific recombination.

    abstract::Recombination of phage lambda attachment sites occurs by sequential exchange of the DNA strands at two specific locations. The first exchange produces a Holliday structure, and the second resolves it to recombinant products. Heterology for base substitution mutations in the region between the two strand exchange point...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Bauer CE,Gardner JF,Gumport RI,Weisberg RA

    更新日期:1989-08-01 00:00:00

  • Properties of natural double-strand-break sites at a recombination hotspot in Saccharomyces cerevisiae.

    abstract::This study addresses three questions about the properties of recombination hotspots in Saccharomyces cerevisiae: How much DNA is required for double-strand-break (DSB) site recognition? Do naturally occurring DSB sites compete with each other in meiotic recombination? What role does the sequence located at the sites o...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Haring SJ,Halley GR,Jones AJ,Malone RE

    更新日期:2003-09-01 00:00:00

  • Genetics and Genomics of Social Behavior in a Chicken Model.

    abstract::The identification of genes affecting sociality can give insights into the maintenance and development of sociality and personality. In this study, we used the combination of an advanced intercross between wild and domestic chickens with a combined QTL and eQTL genetical genomics approach to identify genes for social ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.118.300810

    authors: Johnsson M,Henriksen R,Fogelholm J,Höglund A,Jensen P,Wright D

    更新日期:2018-05-01 00:00:00

  • Frequency spectrum neutrality tests: one for all and all for one.

    abstract::Neutrality tests based on the frequency spectrum (e.g., Tajima's D or Fu and Li's F) are commonly used by population geneticists as routine tests to assess the goodness-of-fit of the standard neutral model on their data sets. Here, I show that these neutrality tests are specific instances of a general model that encom...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.109.104042

    authors: Achaz G

    更新日期:2009-09-01 00:00:00

  • Molecular genetic analysis of Chd3 and polytene chromosome region 76B-D in Drosophila melanogaster.

    abstract::The Drosophila melanogaster Chd3 gene encodes a member of the CHD group of SNF2/RAD54 ATPases. CHD proteins are conserved from yeast to man and many are subunits of chromatin-remodeling complexes that facilitate transcription. Drosophila CHD3 proteins are not found in protein complexes, but as monomers that remodel ch...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.110.115121

    authors: Cooper MT,Conant AW,Kennison JA

    更新日期:2010-07-01 00:00:00

  • The centenary of Janssens's chiasmatype theory.

    abstract::The segregation and random assortment of characters observed by Mendel have their basis in the behavior of chromosomes in meiosis. But showing this actually to be the case requires a correct understanding of the meiotic behavior of chromosomes. This was achieved only gradually, over several decades, with much dispute ...

    journal_title:Genetics

    pub_type: 传,历史文章,杂志文章

    doi:10.1534/genetics.112.139733

    authors: Koszul R,Meselson M,Van Doninck K,Vandenhaute J,Zickler D

    更新日期:2012-06-01 00:00:00

  • The evolution of age-specific mortality rates in Drosophila melanogaster: genetic divergence among unselected lines.

    abstract::Age-specific effects of spontaneous mutations on mortality rates in Drosophila are inferred from three large demographic experiments. Data were collected from inbred lines that were allowed to accumulate spontaneous mutations for 10, 19, and 47 generations. Estimates of age-specific mutational variance for mortality w...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Pletcher SD,Houle D,Curtsinger JW

    更新日期:1999-10-01 00:00:00

  • Rapid detection of positive selection in genes and genomes through variation clusters.

    abstract::Positive selection in genes and genomes can point to the evolutionary basis for differences among species and among races within a species. The detection of positive selection can also help identify functionally important protein regions and thus guide protein engineering. Many existing tests for positive selection ar...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.107.074732

    authors: Wagner A

    更新日期:2007-08-01 00:00:00

  • Template switching during break-induced replication is promoted by the Mph1 helicase in Saccharomyces cerevisiae.

    abstract::Chromosomal double-strand breaks (DSBs) that have only one end with homology to a donor duplex undergo repair by strand invasion followed by replication to the chromosome terminus (break-induced replication, BIR). Using a transformation-based assay system, it was previously shown that BIR could occur by several rounds...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.162297

    authors: Stafa A,Donnianni RA,Timashev LA,Lam AF,Symington LS

    更新日期:2014-04-01 00:00:00

  • Conidial Morphogenesis and Septin-Mediated Plant Infection Require Smo1, a Ras GTPase-Activating Protein in Magnaporthe oryzae.

    abstract::The pathogenic life cycle of the rice blast fungus Magnaporthe oryzae involves a series of morphogenetic changes, essential for its ability to cause disease. The smo mutation was identified > 25 years ago, and affects the shape and development of diverse cell types in M. oryzae, including conidia, appressoria, and asc...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.118.301490

    authors: Kershaw MJ,Basiewicz M,Soanes DM,Yan X,Ryder LS,Csukai M,Oses-Ruiz M,Valent B,Talbot NJ

    更新日期:2019-01-01 00:00:00

  • The glucose transporter (GLUT4) enhancer factor is required for normal wing positioning in Drosophila.

    abstract::Many of the transcription factors and target genes that pattern the developing adult remain unknown. In the present study, we find that an ortholog of the poorly understood transcription factor, glucose transporter (GLUT4) enhancer factor (Glut4EF, GEF) [also known as the Huntington's disease gene regulatory region-bi...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.107.078030

    authors: Yazdani U,Huang Z,Terman JR

    更新日期:2008-02-01 00:00:00

  • On the nature of sister-chromatid exchanges in 5-bromodeoxyuridine-substituted chromosomes.

    abstract::Sister-chromatid exchanges (SCE) were studied in allium cepa L. meristematic cells at the second and third divisions after BrdUrd-substitution during just the first or during the second and third cycles, respectively. The observed SCE nonreciprocal/reciprocal ratios detected at the third division in both experiments, ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Schvartzman JB,Cortés F,González-Fernández A,Gutiérrez C,López-Sáez JF

    更新日期:1979-08-01 00:00:00