Simulating local adaptation to climate of forest trees with a Physio-Demo-Genetics model.

Abstract:

:One challenge of evolutionary ecology is to predict the rate and mechanisms of population adaptation to environmental variations. The variations in most life history traits are shaped both by individual genotypic and by environmental variation. Forest trees exhibit high levels of genetic diversity, large population sizes, and gene flow, and they also show a high level of plasticity for life history traits. We developed a new Physio-Demo-Genetics model (denoted PDG) coupling (i) a physiological module simulating individual tree responses to the environment; (ii) a demographic module simulating tree survival, reproduction, and pollen and seed dispersal; and (iii) a quantitative genetics module controlling the heritability of key life history traits. We used this model to investigate the plastic and genetic components of the variations in the timing of budburst (TBB) along an elevational gradient of Fagus sylvatica (the European beech). We used a repeated 5 years climatic sequence to show that five generations of natural selection were sufficient to develop nonmonotonic genetic differentiation in the TBB along the local climatic gradient but also that plastic variation among different elevations and years was higher than genetic variation. PDG complements theoretical models and provides testable predictions to understand the adaptive potential of tree populations.

journal_name

Evol Appl

authors

Oddou-Muratorio S,Davi H

doi

10.1111/eva.12143

subject

Has Abstract

pub_date

2014-04-01 00:00:00

pages

453-67

issue

4

issn

1752-4571

journal_volume

7

pub_type

杂志文章
  • Life-history evolution and elevated natural mortality in a population of Atlantic cod (Gadus morhua).

    abstract::Fisheries-induced evolution has been hypothesized to delay the recovery of collapsed fish stocks through effects on their productivity. The cod stock in the southern Gulf of St. Lawrence (SGSL) collapsed in the early 1990s and has shown no recovery since then, due mainly to high natural mortality of adult cod. Age and...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/j.1752-4571.2010.00128.x

    authors: Swain DP

    更新日期:2011-01-01 00:00:00

  • Genes predict long distance migration and large body size in a migratory fish, Pacific lamprey.

    abstract::Elucidation of genetic mechanisms underpinning migratory behavior could help predict how changes in genetic diversity may affect future spatiotemporal distribution of a migratory species. This ability would benefit conservation of one such declining species, anadromous Pacific lamprey (Entosphenus tridentatus). Nonphi...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12203

    authors: Hess JE,Caudill CC,Keefer ML,McIlraith BJ,Moser ML,Narum SR

    更新日期:2014-12-01 00:00:00

  • Transcriptomic responses to emamectin benzoate in Pacific and Atlantic Canada salmon lice Lepeophtheirus salmonis with differing levels of drug resistance.

    abstract::Salmon lice Lepeophtheirus salmonis are an ecologically and economically important parasite of wild and farmed salmon. In Scotland, Norway, and Eastern Canada, L. salmonis have developed resistance to emamectin benzoate (EMB), one of the few parasiticides available for salmon lice. Drug resistance mechanisms can be co...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12237

    authors: Sutherland BJ,Poley JD,Igboeli OO,Jantzen JR,Fast MD,Koop BF,Jones SR

    更新日期:2015-02-01 00:00:00

  • Long-term on-farm participatory maize breeding by stratified mass selection retains molecular diversity while improving agronomic performance.

    abstract::Modern maize breeding programs gave rise to genetically uniform varieties that can affect maize's capacity to cope with increasing climate unpredictability. Maize populations, genetically more heterogeneous, can evolve and better adapt to a broader range of edaphic-climatic conditions. These populations usually suffer...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12549

    authors: Alves ML,Belo M,Carbas B,Brites C,Paulo M,Mendes-Moreira P,Brites C,Bronze MDR,Šatović Z,Vaz Patto MC

    更新日期:2017-10-14 00:00:00

  • The role of experiments in understanding fishery-induced evolution.

    abstract::Evidence of fishery-induced evolution has been accumulating rapidly from various avenues of investigation. Here we review the knowledge gained from experimental approaches. The strength of experiments is in their ability to disentangle genetic from environmental differences. Common garden experiments have provided dir...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/j.1752-4571.2009.00079.x

    authors: Conover DO,Baumann H

    更新日期:2009-08-01 00:00:00

  • Genotyping-by-sequencing of genome-wide microsatellite loci reveals fine-scale harvest composition in a coastal Atlantic salmon fishery.

    abstract::Individual assignment and genetic mixture analysis are commonly utilized in contemporary wildlife and fisheries management. Although microsatellite loci provide unparalleled numbers of alleles per locus, their use in assignment applications is increasingly limited. However, next-generation sequencing, in conjunction w...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12606

    authors: Bradbury IR,Wringe BF,Watson B,Paterson I,Horne J,Beiko R,Lehnert SJ,Clément M,Anderson EC,Jeffery NW,Duffy S,Sylvester E,Robertson M,Bentzen P

    更新日期:2018-03-11 00:00:00

  • The genomics of domestication special issue editorial.

    abstract::Domestication has been of major interest to biologists for centuries, whether for creating new plants and animal types or more formally exploring the principles of evolution. Such studies have long used combinations of phenotypic and genetic evidence. Recently, the advent of a large number of genomes and genomic tools...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12693

    authors: Kantar MB,Bruford MW,Rieseberg LH

    更新日期:2018-09-17 00:00:00

  • Geographic population structure of the African malaria vector Anopheles gambiae suggests a role for the forest-savannah biome transition as a barrier to gene flow.

    abstract::The primary Afrotropical malaria mosquito vector Anopheles gambiae sensu stricto has a complex population structure. In west Africa, this species is split into two molecular forms and displays local and regional variation in chromosomal arrangements and behaviors. To investigate patterns of macrogeographic population ...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12075

    authors: Pinto J,Egyir-Yawson A,Vicente J,Gomes B,Santolamazza F,Moreno M,Charlwood J,Simard F,Elissa N,Weetman D,Donnelly M,Caccone A,Della Torre A

    更新日期:2013-09-01 00:00:00

  • Proliferation and benevolence-A framework for dissecting the mechanisms of microbial virulence and health promotion.

    abstract::Key topics in the study of host-microbe interactions-such as the prevention of drug resistance and the exploitation of beneficial effects of bacteria-would benefit from concerted efforts with both mechanistic and evolutionary approaches. But due to differences in intellectual traditions, insights gained in one field r...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12952

    authors: Wollein Waldetoft K,Råberg L,Lood R

    更新日期:2020-03-31 00:00:00

  • The adaptive potential of subtropical rainbowfish in the face of climate change: heritability and heritable plasticity for the expression of candidate genes.

    abstract::Whilst adaptation and phenotypic plasticity might buffer species against habitat degradation associated with global climate change, few studies making such claims also possess the necessary and sufficient data to support them. Doing so requires demonstration of heritable variation in traits affecting fitness under new...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12363

    authors: McCairns RJ,Smith S,Sasaki M,Bernatchez L,Beheregaray LB

    更新日期:2016-02-18 00:00:00

  • Elevated mitochondrial genome variation after 50 generations of radiation exposure in a wild rodent.

    abstract::Currently, the effects of chronic, continuous low dose environmental irradiation on the mitochondrial genome of resident small mammals are unknown. Using the bank vole (Myodes glareolus) as a model system, we tested the hypothesis that approximately 50 generations of exposure to the Chernobyl environment has significa...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12475

    authors: Baker RJ,Dickins B,Wickliffe JK,Khan FAA,Gaschak S,Makova KD,Phillips CD

    更新日期:2017-06-22 00:00:00

  • Pattern of local adaptation to quantitative host resistance in a major pathogen of a perennial crop.

    abstract::Understanding the mechanisms involved in pathogen adaptation to quantitative resistance in plants has a key role to play in establishing durable strategies for resistance deployment, especially in perennial crops. The erosion of quantitative resistance has been recently suspected in Cuba and the Dominican Republic for...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12904

    authors: Dumartinet T,Abadie C,Bonnot F,Carreel F,Roussel V,Habas R,Martinez RT,Perez-Vicente L,Carlier J

    更新日期:2019-12-31 00:00:00

  • Latitudinal variation in cold hardiness in introduced Tamarix and native Populus.

    abstract::To investigate the evolution of clinal variation in an invasive plant, we compared cold hardiness in the introduced saltcedar (Tamarix ramosissima, Tamarix chinensis, and hybrids) and the native plains cottonwood (Populus deltoides subsp. monilifera). In a shadehouse in Colorado (41°N), we grew plants collected along ...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/j.1752-4571.2008.00044.x

    authors: Friedman JM,Roelle JE,Gaskin JF,Pepper AE,Manhart JR

    更新日期:2008-11-01 00:00:00

  • Delineating species in the speciation continuum: A proposal.

    abstract::Delineating species is a difficult and seemingly uninteresting issue that is still essential to address. Taxonomic methodology is heterogeneous according to the taxa and scientists involved due to the disparate data quality and quantity and disagreements over the species concept. This has negative impacts on basic and...

    journal_title:Evolutionary applications

    pub_type: 杂志文章,评审

    doi:10.1111/eva.12748

    authors: Galtier N

    更新日期:2019-03-25 00:00:00

  • Relative contributions of neutral and non-neutral genetic differentiation to inform conservation of steelhead trout across highly variable landscapes.

    abstract::Mounting evidence of climatic effects on riverine environments and adaptive responses of fishes have elicited growing conservation concerns. Measures to rectify population declines include assessment of local extinction risk, population ecology, viability, and genetic differentiation. While conservation planning has b...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12174

    authors: Matala AP,Ackerman MW,Campbell MR,Narum SR

    更新日期:2014-06-01 00:00:00

  • Friend and foe: factors influencing the movement of the bacterium Helicobacter pylori along the parasitism-mutualism continuum.

    abstract::Understanding the transition of bacterial species from commensal to pathogen, or vice versa, is a key application of evolutionary theory to preventative medicine. This requires working knowledge of the molecular interaction between hosts and bacteria, ecological interactions among microbes, spatial variation in bacter...

    journal_title:Evolutionary applications

    pub_type: 杂志文章,评审

    doi:10.1111/eva.12231

    authors: Lin D,Koskella B

    更新日期:2015-01-01 00:00:00

  • Genetic architecture, demographic history, and genomic differentiation of Populus davidiana revealed by whole-genome resequencing.

    abstract::Forest trees are an excellent resource from which to understand population differentiation and heterogeneous genome variation patterns due to the majority of forest trees being distributed widely and able to adapt to different climates and environments. Populus davidiana is among the most geographically widespread and...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.13046

    authors: Hou Z,Li A,Zhang J

    更新日期:2020-07-15 00:00:00

  • Genomic changes in the biological control agent Cryptolaemus montrouzieri associated with introduction.

    abstract::Biological control is the main purpose of intentionally introducing non-native invertebrate species. The evolutionary changes that occur in the populations of the introduced biological control agents may determine the agent's efficiency and the environmental safety. Here, to explore the pattern and extent of potential...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12774

    authors: Li HS,Heckel G,Huang YH,Fan WJ,Ślipiński A,Pang H

    更新日期:2019-02-11 00:00:00

  • Evolutionary Agroecology: the potential for cooperative, high density, weed-suppressing cereals.

    abstract::Evolutionary theory can be applied to improve agricultural yields and/or sustainability, an approach we call Evolutionary Agroecology. The basic idea is that plant breeding is unlikely to improve attributes already favored by millions of years of natural selection, whereas there may be unutilized potential in selectin...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/j.1752-4571.2010.00144.x

    authors: Weiner J,Andersen SB,Wille WK,Griepentrog HW,Olsen JM

    更新日期:2010-09-01 00:00:00

  • Persistence of antibiotic resistance plasmids in bacterial biofilms.

    abstract::The emergence and spread of antibiotic resistance is a crisis in health care today. Antibiotic resistance is often horizontally transferred to susceptible bacteria by means of multidrug resistance plasmids that may or may not persist in the absence of antibiotics. Because bacterial pathogens often grow as biofilms, th...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12480

    authors: Ridenhour BJ,Metzger GA,France M,Gliniewicz K,Millstein J,Forney LJ,Top EM

    更新日期:2017-05-08 00:00:00

  • Underutilized resources for studying the evolution of invasive species during their introduction, establishment, and lag phases.

    abstract::The early phases of biological invasions are poorly understood. In particular, during the introduction, establishment, and possible lag phases, it is unclear to what extent evolution must take place for an introduced species to transition from established to expanding. In this study, we highlight three disparate data ...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/j.1752-4571.2009.00101.x

    authors: Marsico TD,Burt JW,Espeland EK,Gilchrist GW,Jamieson MA,Lindström L,Roderick GK,Swope S,Szűcs M,Tsutsui ND

    更新日期:2010-03-01 00:00:00

  • Invasion thresholds and the evolution of nonequilibrium virulence.

    abstract::The enterprise of virulence management attempts to predict how social practices and other factors affect the evolution of parasite virulence. These predictions are often based on parasite optima or evolutionary equilibria derived from models of host-parasite dynamics. Yet even when such models accurately capture the p...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/j.1752-4571.2007.00003.x

    authors: Bull JJ,Ebert D

    更新日期:2008-02-01 00:00:00

  • Dispersal syndromes and the use of life-histories to predict dispersal.

    abstract::Due to its impact on local adaptation, population functioning or range shifts, dispersal is considered a central process for population persistence and species evolution. However, measuring dispersal is complicated, which justifies the use of dispersal proxies. Although appealing, and despite its general relationship ...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12049

    authors: Stevens VM,Trochet A,Blanchet S,Moulherat S,Clobert J,Baguette M

    更新日期:2013-06-01 00:00:00

  • Assessing early fitness consequences of exotic gene flow in the wild: a field study with Iberian pine relicts.

    abstract::Gene flow from plantations of nonlocal (genetically exotic) tree provenances into natural stands of the same species is probably a widespread phenomenon, but its effects remain largely unexamined. We investigated early fitness consequences of intraspecific exotic gene flow in the wild by assessing differences in survi...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12333

    authors: Unger GM,Heuertz M,Vendramin GG,Robledo-Arnuncio JJ

    更新日期:2016-01-09 00:00:00

  • Toward responsible stock enhancement: broadcast spawning dynamics and adaptive genetic management in white seabass aquaculture.

    abstract::The evolutionary effects captive-bred individuals that can have on wild conspecifics are necessary considerations for stock enhancement programs, but breeding protocols are often developed without the knowledge of realized reproductive behavior. To help fill that gap, parentage was assigned to offspring produced by a ...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/j.1752-4571.2011.00234.x

    authors: Gruenthal KM,Drawbridge MA

    更新日期:2012-06-01 00:00:00

  • Hybridization of an invasive shrub affects tolerance and resistance to defoliation by a biological control agent.

    abstract::Evolution has contributed to the successful invasion of exotic plant species in their introduced ranges, but how evolution affects particular control strategies is still under evaluation. For instance, classical biological control, a common strategy involving the utilization of highly specific natural enemies to contr...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12134

    authors: Williams WI,Friedman JM,Gaskin JF,Norton AP

    更新日期:2014-03-01 00:00:00

  • Plasticity and genetic adaptation mediate amphibian and reptile responses to climate change.

    abstract::Phenotypic plasticity and genetic adaptation are predicted to mitigate some of the negative biotic consequences of climate change. Here, we evaluate evidence for plastic and evolutionary responses to climate variation in amphibians and reptiles via a literature review and meta-analysis. We included studies that either...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12114

    authors: Urban MC,Richardson JL,Freidenfelds NA

    更新日期:2014-01-01 00:00:00

  • Contemporary evolution and the dynamics of invasion in crop-wild hybrids with heritable variation for two weedy life-histories.

    abstract::Gene flow in crop-wild complexes between phenotypically differentiated ancestors may transfer adaptive genetic variation that alters the fecundity and, potentially, the population growth (λ) of weeds. We created biotypes with potentially invasive traits, early flowering or long leaves, in wild radish (Raphanus raphani...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12366

    authors: Campbell LG,Teitel Z,Miriti MN

    更新日期:2016-02-28 00:00:00

  • Introgression of Chinese haplotypes contributed to the improvement of Danish Duroc pigs.

    abstract::The distribution of Asian ancestry in the genome of Danish Duroc pigs was investigated using whole-genome sequencing data from European wild boars, Danish Duroc, Chinese Meishan and Bamaxiang pigs. Asian haplotypes deriving from Meishan and Bamaxiang occur widely across the genome. Signatures of selection on Asian hap...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12716

    authors: Chen M,Su G,Fu J,Wang A,Liu JF,Lund MS,Guldbrandtsen B

    更新日期:2018-12-13 00:00:00

  • Predation shapes the impact of cancer on population dynamics and the evolution of cancer resistance.

    abstract::Cancer is a widespread disease that affects most of the metazoans. However, cancer development is a slow process and, long before causing the death of the individual, may weaken organisms' capacities and impair their interactions with other species. Yet, the impact of cancer development on biotic interactions, and ove...

    journal_title:Evolutionary applications

    pub_type: 杂志文章

    doi:10.1111/eva.12951

    authors: Perret C,Gidoin C,Ujvari B,Thomas F,Roche B

    更新日期:2020-06-26 00:00:00