Bayesian scalar-on-image regression with application to association between intracranial DTI and cognitive outcomes.

Abstract:

:Diffusion tensor imaging (DTI) measures water diffusion within white matter, allowing for in vivo quantification of brain pathways. These pathways often subserve specific functions, and impairment of those functions is often associated with imaging abnormalities. As a method for predicting clinical disability from DTI images, we propose a hierarchical Bayesian "scalar-on-image" regression procedure. Our procedure introduces a latent binary map that estimates the locations of predictive voxels and penalizes the magnitude of effect sizes in these voxels, thereby resolving the ill-posed nature of the problem. By inducing a spatial prior structure, the procedure yields a sparse association map that also maintains spatial continuity of predictive regions. The method is demonstrated on a simulation study and on a study of association between fractional anisotropy and cognitive disability in a cross-sectional sample of 135 multiple sclerosis patients.

journal_name

Neuroimage

journal_title

NeuroImage

authors

Huang L,Goldsmith J,Reiss PT,Reich DS,Crainiceanu CM

doi

10.1016/j.neuroimage.2013.06.020

subject

Has Abstract

pub_date

2013-12-01 00:00:00

pages

210-23

eissn

1053-8119

issn

1095-9572

pii

S1053-8119(13)00657-5

journal_volume

83

pub_type

杂志文章
  • Ballistocardiogram artifact reduction in the simultaneous acquisition of auditory ERPS and fMRI.

    abstract::Electroencephalography (EEG) and functional magnetic resonance imaging (fMRI) are now being combined to analyze brain function. Confounding the EEG signal acquired in the MR environment is a ballistocardiogram artifact (BA), which is predominantly caused by cardiac-related body movement. The objective of this study wa...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2004.03.033

    authors: Ellingson ML,Liebenthal E,Spanaki MV,Prieto TE,Binder JR,Ropella KM

    更新日期:2004-08-01 00:00:00

  • Advanced MRI techniques to improve our understanding of experience-induced neuroplasticity.

    abstract::Over the last two decades, numerous human MRI studies of neuroplasticity have shown compelling evidence for extensive and rapid experience-induced brain plasticity in vivo. To date, most of these studies have consisted of simply detecting a difference in structural or functional images with little concern for their la...

    journal_title:NeuroImage

    pub_type: 杂志文章,评审

    doi:10.1016/j.neuroimage.2015.08.047

    authors: Tardif CL,Gauthier CJ,Steele CJ,Bazin PL,Schäfer A,Schaefer A,Turner R,Villringer A

    更新日期:2016-05-01 00:00:00

  • Commonality of neural representations of words and pictures.

    abstract::In this work we explore whether the patterns of brain activity associated with thinking about concrete objects are dependent on stimulus presentation format, whether an object is referred to by a written or pictorial form. Multi-voxel pattern analysis methods were applied to brain imaging (fMRI) data to identify the i...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2010.10.042

    authors: Shinkareva SV,Malave VL,Mason RA,Mitchell TM,Just MA

    更新日期:2011-02-01 00:00:00

  • A vascular anatomical network model of the spatio-temporal response to brain activation.

    abstract::Neuronal activity-induced changes in vascular tone and oxygen consumption result in a dynamic evolution of blood flow, volume, and oxygenation. Functional neuroimaging techniques, such as functional magnetic resonance imaging, optical imaging, and PET, provide indirect measures of the neural-induced vascular dynamics ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2007.12.061

    authors: Boas DA,Jones SR,Devor A,Huppert TJ,Dale AM

    更新日期:2008-04-15 00:00:00

  • Predicting response originality through brain activity: An analysis of changes in EEG alpha power during the generation of alternative ideas.

    abstract::Growing neurophysiological evidence points to a role of alpha oscillations in divergent thinking (DT). In particular, studies have shown a consistent EEG alpha synchronization during performance on the Alternative Uses Task (AUT), a well-established DT task. However, there is a need for investigating the brain dynamic...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2019.116385

    authors: Agnoli S,Zanon M,Mastria S,Avenanti A,Corazza GE

    更新日期:2020-02-15 00:00:00

  • Probabilistic streamline q-ball tractography using the residual bootstrap.

    abstract::Q-ball imaging has the ability to discriminate multiple intravoxel fiber populations within regions of complex white matter architecture. This information can be used for fiber tracking; however, diffusion MR is susceptible to noise and multiple other sources of uncertainty affecting the measured orientation of fiber ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2007.08.021

    authors: Berman JI,Chung S,Mukherjee P,Hess CP,Han ET,Henry RG

    更新日期:2008-01-01 00:00:00

  • Reproducibility of amygdala activation in facial emotion processing at 7T.

    abstract::Despite its importance as the prime method for non-invasive assessment of human brain function, functional MRI (fMRI) was repeatedly challenged with regards to the validity of the fMRI-derived brain activation maps. Amygdala fMRI was particularly targeted, as the amygdala's anatomical position in the ventral brain com...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2020.116585

    authors: Geissberger N,Tik M,Sladky R,Woletz M,Schuler AL,Willinger D,Windischberger C

    更新日期:2020-05-01 00:00:00

  • Local volume fraction distributions of axons, astrocytes, and myelin in deep subcortical white matter.

    abstract::This study aims to statistically describe histologically stained white matter brain sections to subsequently inform and validate diffusion MRI techniques. For the first time, we characterise volume fraction distributions of three of the main structures in deep subcortical white matter (axons, astrocytes, and myelinate...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2018.06.040

    authors: Coelho S,Pozo JM,Costantini M,Highley JR,Mozumder M,Simpson JE,Ince PG,Frangi AF

    更新日期:2018-10-01 00:00:00

  • Understanding the neural mechanisms involved in sensory control of voice production.

    abstract::Auditory feedback is important for the control of voice fundamental frequency (F0). In the present study we used neuroimaging to identify regions of the brain responsible for sensory control of the voice. We used a pitch-shift paradigm where subjects respond to an alteration, or shift, of voice pitch auditory feedback...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2012.02.068

    authors: Parkinson AL,Flagmeier SG,Manes JL,Larson CR,Rogers B,Robin DA

    更新日期:2012-05-15 00:00:00

  • Evaluation of activity-dependent functional pH and T1ρ response in the visual cortex.

    abstract::Recent experiments suggest that T1 relaxation in the rotating frame (T1ρ) detects localized metabolic changes in the human visual cortex induced by a flashing checkerboard task. Possible sources of the T1ρ signal include pH, glucose, and glutamate concentrations as well as changes in cerebral blood volume. In this stu...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2014.01.042

    authors: Heo HY,Wemmie J,Thedens D,Magnotta VA

    更新日期:2014-07-15 00:00:00

  • Enhancing reproducibility of fMRI statistical maps using generalized canonical correlation analysis in NPAIRS framework.

    abstract::Common fMRI data processing techniques usually minimize a temporal cost function or fit a temporal model to extract an activity map. Here, we focus on extracting a highly, spatially reproducible statistical parametric map (SPM) from fMRI data using a cost function that does not depend on a model of the subjects' tempo...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2012.01.137

    authors: Afshin-Pour B,Hossein-Zadeh GA,Strother SC,Soltanian-Zadeh H

    更新日期:2012-05-01 00:00:00

  • Whole brain mapping of water pools and molecular dynamics with rotating frame MR relaxation using gradient modulated low-power adiabatic pulses.

    abstract::Nuclear magnetic resonance (NMR) relaxation in the rotating frame is sensitive to molecular dynamics on the time scale of water molecules interacting with macromolecules or supramolecular complexes, such as proteins, myelin and cell membranes. Hence, longitudinal (T1ρ) and transverse (T2ρ) relaxation in the rotating f...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2013.12.007

    authors: Andronesi OC,Bhat H,Reuter M,Mukherjee S,Caravan P,Rosen BR

    更新日期:2014-04-01 00:00:00

  • Detecting stable individual differences in the functional organization of the human basal ganglia.

    abstract::Moving from group level to individual level functional parcellation maps is a critical step for developing a rich understanding of the links between individual variation in functional network architecture and cognitive and clinical phenotypes. Still, the identification of functional units in the brain based on intrins...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2017.07.029

    authors: Garcia-Garcia M,Nikolaidis A,Bellec P,Craddock RC,Cheung B,Castellanos FX,Milham MP

    更新日期:2018-04-15 00:00:00

  • Neuroanatomical substrates involved in true and false memories for face.

    abstract::We often mistake an unknown person for a familiar person because of the similarities in facial features. This phenomenon, known as false memory, has been investigated mainly using words, pictures, and shapes. Previous neuroimaging studies on false memory have shown that both true and false memories trigger a similar a...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2012.04.044

    authors: Iidaka T,Harada T,Kawaguchi J,Sadato N

    更新日期:2012-08-01 00:00:00

  • Imaging brain hemodynamic changes during rat forepaw electrical stimulation using functional photoacoustic microscopy.

    abstract::The present study reported the development of a novel functional photoacoustic microscopy (fPAM) system for investigating hemodynamic changes in rat cortical vessels associated with electrical forepaw stimulation. Imaging of blood optical absorption by fPAM at multiple appropriately-selected and distinct wavelengths c...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2010.03.065

    authors: Liao LD,Li ML,Lai HY,Shih YY,Lo YC,Tsang S,Chao PC,Lin CT,Jaw FS,Chen YY

    更新日期:2010-08-15 00:00:00

  • Using the BOLD MR signal to differentiate the stereoisomers of ketamine in the rat.

    abstract:RATIONALE:Ketamine is a chiral molecule that is reported to model aspects of schizophrenia. OBJECTIVES:To investigate the stereospecificity of the isomers of ketamine using pharmacological magnetic resonance imaging (phMRI) in order to further understand ketamine's pharmacodynamic actions. METHOD:Responses to 25 mg k...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2006.05.022

    authors: Littlewood CL,Cash D,Dixon AL,Dix SL,White CT,O'Neill MJ,Tricklebank M,Williams SC

    更新日期:2006-10-01 00:00:00

  • Evidence that juvenile myoclonic epilepsy is a disorder of frontotemporal corticothalamic networks.

    abstract::The purpose of this study is to determine regions of cerebral cortex activated during the onset and propagation of dense array electroencephalographic (dEEG) epileptiform discharges in patients with juvenile myoclonic epilepsy (JME), through the use of 256 channel, dense array scalp EEG recordings. Ten patients (16-58...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2009.08.004

    authors: Holmes MD,Quiring J,Tucker DM

    更新日期:2010-01-01 00:00:00

  • Neuroimaging of the periaqueductal gray: state of the field.

    abstract::This review and meta-analysis aims at summarizing and integrating the human neuroimaging studies that report periaqueductal gray (PAG) involvement; 250 original manuscripts on human neuroimaging of the PAG were identified. A narrative review and meta-analysis using activation likelihood estimates is included. Behavior...

    journal_title:NeuroImage

    pub_type: 杂志文章,meta分析,评审

    doi:10.1016/j.neuroimage.2011.11.095

    authors: Linnman C,Moulton EA,Barmettler G,Becerra L,Borsook D

    更新日期:2012-03-01 00:00:00

  • Head motion during MRI acquisition reduces gray matter volume and thickness estimates.

    abstract::Imaging biomarkers derived from magnetic resonance imaging (MRI) data are used to quantify normal development, disease, and the effects of disease-modifying therapies. However, motion during image acquisition introduces image artifacts that, in turn, affect derived markers. A systematic effect can be problematic since...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2014.12.006

    authors: Reuter M,Tisdall MD,Qureshi A,Buckner RL,van der Kouwe AJW,Fischl B

    更新日期:2015-02-15 00:00:00

  • Nonlinear coupling between occipital and motor cortex during motor imagery: a dynamic causal modeling study.

    abstract::We demonstrate the capacity of dynamic causal modeling to characterize the nonlinear coupling among cortical sources that underlie time-frequency modulations in MEG data. Our experimental task involved the mental rotation of hand drawings that ten subjects used to decide if it was a right or left hand. Reaction times ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2012.12.076

    authors: van Wijk BC,Litvak V,Friston KJ,Daffertshofer A

    更新日期:2013-05-01 00:00:00

  • The MNI data-sharing and processing ecosystem.

    abstract::Neuroimaging has been facing a data deluge characterized by the exponential growth of both raw and processed data. As a result, mining the massive quantities of digital data collected in these studies offers unprecedented opportunities and has become paramount for today's research. As the neuroimaging community enters...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2015.08.076

    authors: Das S,Glatard T,MacIntyre LC,Madjar C,Rogers C,Rousseau ME,Rioux P,MacFarlane D,Mohades Z,Gnanasekaran R,Makowski C,Kostopoulos P,Adalat R,Khalili-Mahani N,Niso G,Moreau JT,Evans AC

    更新日期:2016-01-01 00:00:00

  • Neurite orientation dispersion and density imaging reveals white matter and hippocampal microstructure changes produced by Interleukin-6 in the TgCRND8 mouse model of amyloidosis.

    abstract::Extracellular β-amyloid (Aβ) plaque deposits and inflammatory immune activation are thought to alter various aspects of tissue microstructure, such as extracellular free water, fractional anisotropy and diffusivity, as well as the density and geometric arrangement of axonal processes. Quantifying these microstructural...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2019.116138

    authors: Colon-Perez LM,Ibanez KR,Suarez M,Torroella K,Acuna K,Ofori E,Levites Y,Vaillancourt DE,Golde TE,Chakrabarty P,Febo M

    更新日期:2019-11-15 00:00:00

  • Towards a fronto-temporal neural network for the decoding of angry vocal expressions.

    abstract::Vocal expressions commonly elicit activity in superior temporal and inferior frontal cortices, indicating a distributed network to decode vocally expressed emotions. We examined the involvement of this fronto-temporal network for the decoding of angry voices during attention towards (explicit attention) or away from e...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2012.06.015

    authors: Frühholz S,Grandjean D

    更新日期:2012-09-01 00:00:00

  • Effects of intrinsic motivation on feedback processing during learning.

    abstract::Learning commonly requires feedback about the consequences of one's actions, which can drive learners to modify their behavior. Motivation may determine how sensitive an individual might be to such feedback, particularly in educational contexts where some students value academic achievement more than others. Thus, mot...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2015.06.046

    authors: DePasque S,Tricomi E

    更新日期:2015-10-01 00:00:00

  • Visual cortex signals a mismatch between regularity of auditory and visual streams.

    abstract::Understanding how humans code for and respond to environmental uncertainty/regularity is a question shared by current computational and neurobiological approaches to human cognition. To date, studies investigating neurobiological systems that track input uncertainty have examined responses to uni-sensory streams. It i...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2017.05.028

    authors: Andric M,Davis B,Hasson U

    更新日期:2017-08-15 00:00:00

  • Spatiotemporal profiles of visual processing with and without primary visual cortex.

    abstract::The spatiotemporal profiles of visual processing are normally distributed in two temporal phases, each lasting about 100 ms. Within each phase, cortical processing begins in V1 and traverses the visual cortical hierarchy. However, the causal role of V1 in starting each of these two phases is unknown. Here we used magn...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2012.07.058

    authors: Ioannides AA,Poghosyan V,Liu L,Saridis GA,Tamietto M,Op de Beeck M,De Tiège X,Weiskrantz L,de Gelder B

    更新日期:2012-11-15 00:00:00

  • The fine line between 'brave' and 'reckless': amygdala reactivity and regulation predict recognition of risk.

    abstract:BACKGROUND:High sensation-seekers (HSS) pursue novelty even at the cost of self-harm. When challenged, HSS are less anxious, show blunted physiological (cortisol, startle) and neurobiological (prefrontal-limbic) responses, and devalue aversive outcomes. Here, we investigate how these features interact under conditions ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2014.08.038

    authors: Mujica-Parodi LR,Carlson JM,Cha 차지욱 J,Rubin D

    更新日期:2014-12-01 00:00:00

  • Right rolandic activation during speech perception in stutterers: a MEG study.

    abstract::The focus of our magnetoencephalographic (MEG) study was to obtain further insight into the neuronal organization of language processing in stutterers. We recorded neuronal activity of 10 male developmental stutterers and 10 male controls, while they listened to pure tones, to words in order to repeat them, and to sen...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2004.11.024

    authors: Biermann-Ruben K,Salmelin R,Schnitzler A

    更新日期:2005-04-15 00:00:00

  • Dissociable neural systems for unconditioned acute and sustained fear.

    abstract::Fear protects organisms by increasing vigilance and preparedness, and by coordinating survival responses during life-threatening encounters. The fear circuit must thus operate on multiple timescales ranging from preparatory sustained alertness to acute fight-or-flight responses. Here we studied the brain basis of sust...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2020.116522

    authors: Hudson M,Seppälä K,Putkinen V,Sun L,Glerean E,Karjalainen T,Karlsson HK,Hirvonen J,Nummenmaa L

    更新日期:2020-08-01 00:00:00

  • Early electrophysiological responses to multiple face orientations correlate with individual discrimination performance in humans.

    abstract::Picture-plane inversion dramatically impairs face recognition. Behavioral and event-related potential (ERP) studies suggest that this effect takes place during perceptual encoding of the face stimulus. However, the relationship between early electrophysiological responses to upright and inverted faces and the behavior...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2007.04.016

    authors: Jacques C,Rossion B

    更新日期:2007-07-01 00:00:00