Detecting stable individual differences in the functional organization of the human basal ganglia.

Abstract:

:Moving from group level to individual level functional parcellation maps is a critical step for developing a rich understanding of the links between individual variation in functional network architecture and cognitive and clinical phenotypes. Still, the identification of functional units in the brain based on intrinsic functional connectivity and its dynamic variations between and within subjects remains challenging. Recently, the bootstrap analysis of stable clusters (BASC) framework was developed to quantify the stability of functional brain networks both across and within subjects. This multi-level approach utilizes bootstrap resampling for both individual and group-level clustering to delineate functional units based on their consistency across and within subjects, while providing a measure of their stability. Here, we optimized the BASC framework for functional parcellation of the basal ganglia by investigating a variety of clustering algorithms and similarity measures. Reproducibility and test-retest reliability were computed to validate this analytic framework as a tool to describe inter-individual differences in the stability of functional networks. The functional parcellation revealed by stable clusters replicated previous divisions found in the basal ganglia based on intrinsic functional connectivity. While we found moderate to high reproducibility, test-retest reliability was high at the boundaries of the functional units as well as within their cores. This is interesting because the boundaries between functional networks have been shown to explain most individual phenotypic variability. The current study provides evidence for the consistency of the parcellation of the basal ganglia, and provides the first group level parcellation built from individual-level cluster solutions. These novel results demonstrate the utility of BASC for quantifying inter-individual differences in the functional organization of brain regions, and encourage usage in future studies.

journal_name

Neuroimage

journal_title

NeuroImage

authors

Garcia-Garcia M,Nikolaidis A,Bellec P,Craddock RC,Cheung B,Castellanos FX,Milham MP

doi

10.1016/j.neuroimage.2017.07.029

subject

Has Abstract

pub_date

2018-04-15 00:00:00

pages

68-82

eissn

1053-8119

issn

1095-9572

pii

S1053-8119(17)30597-9

journal_volume

170

pub_type

杂志文章
  • Emotional conflict in interpersonal interactions.

    abstract::Facial displays of emotions can help to infer the mental states of other individuals. However, the expectations we generate on the basis of people's emotions can mismatch their actual behaviour in certain circumstances, which generates conflict. In the present study, we explored the neural mechanisms of emotional conf...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2010.08.039

    authors: Ruz M,Tudela P

    更新日期:2011-01-15 00:00:00

  • LOFA: software for individualized localization of functional MRI activity.

    abstract::Although PET, SPECT, and fMRI studies have led to significant advances in functional mapping of the human brain, precise localization and quantification of activity in individual brains require additional procedures. Difficulties to be addressed by a localization strategy are: resolution of individual anatomic differe...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1006/nimg.1999.0511

    authors: Gökçay D,Mohr CM,Crosson B,Leonard CM,Bobholz JA

    更新日期:1999-12-01 00:00:00

  • Comparing gray matter loss profiles between dementia with Lewy bodies and Alzheimer's disease using cortical pattern matching: diagnosis and gender effects.

    abstract::We used magnetic resonance imaging (MRI) and cortical pattern matching to map differences in cortical gray matter deficits between Alzheimer's disease (AD) and dementia with Lewy bodies (DLB), and explored the possible influence of gender on these patterns. Twenty-nine patients with AD (age 77.9 +/- 5.5), 16 patients ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2004.04.026

    authors: Ballmaier M,O'Brien JT,Burton EJ,Thompson PM,Rex DE,Narr KL,McKeith IG,DeLuca H,Toga AW

    更新日期:2004-09-01 00:00:00

  • Regional balance between glutamate+glutamine and GABA+ in the resting human brain.

    abstract::Models of healthy brain function and psychiatric conditions assume that excitatory and inhibitory activity are balanced in the human brain at multiple spatial and temporal scales. In human neuroimaging, concentrations of the major excitatory (glutamate) and inhibitory (γ-aminobutyric acid, GABA) neurotransmitters are ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2020.117112

    authors: Steel A,Mikkelsen M,Edden RAE,Robertson CE

    更新日期:2020-10-15 00:00:00

  • Functional MRI evidence for disparate developmental processes underlying intelligence in boys and girls.

    abstract::Previous research has shown evidence for sex differences in the neuroanatomical bases for intelligence in adults. Possible differences in the neuroanatomical correlates of intelligence and their developmental trajectories between boys and girls were investigated using functional MRI (fMRI). A large cohort of over 300 ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2006.01.010

    authors: Schmithorst VJ,Holland SK

    更新日期:2006-07-01 00:00:00

  • Regulation of natural killer cell redistribution by prefrontal cortex during stochastic learning.

    abstract::Acute stress elicits redistribution of lymphocyte subsets, especially natural killer (NK) cells, probably for preparatory defense against potential invasion of antigens in fight-flight situations. We previously reported that regulation of lymphocyte redistribution is based on the evaluation of the controllability of a...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2009.04.088

    authors: Ohira H,Fukuyama S,Kimura K,Nomura M,Isowa T,Ichikawa N,Matsunaga M,Shinoda J,Yamada J

    更新日期:2009-09-01 00:00:00

  • Effect of age and the APOE gene on metabolite concentrations in the posterior cingulate cortex.

    abstract::Proton magnetic resonance spectroscopy (1H-MRS) has provided valuable information about the neurochemical profile of Alzheimer's disease (AD). However, its clinical utility has been limited in part by the lack of consistent information on how metabolite concentrations vary in the normal aging brain and in carriers of ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2017.03.031

    authors: Suri S,Emir U,Stagg CJ,Near J,Mekle R,Schubert F,Zsoldos E,Mahmood A,Singh-Manoux A,Kivimäki M,Ebmeier KP,Mackay CE,Filippini N

    更新日期:2017-05-15 00:00:00

  • Differential contributions of the superior and inferior parietal cortex to feedback versus feedforward control of tools.

    abstract::Damage to the superior and/or inferior parietal lobules (SPL, IPL) (Sirigu et al., 1996) or cerebellum (Grealy and Lee, 2011) can selectively disrupt motor imagery, motivating the hypothesis that these regions participate in predictive (i.e., feedforward) control. If so, then the SPL, IPL, and cerebellum should show g...

    journal_title:NeuroImage

    pub_type: 杂志文章,随机对照试验

    doi:10.1016/j.neuroimage.2014.01.024

    authors: Macuga KL,Frey SH

    更新日期:2014-05-15 00:00:00

  • Empirically grounding grounded cognition: the case of color.

    abstract::Grounded cognition theories hold that the neural states involved in experiencing objects play a direct functional role in representing and accessing object knowledge from memory. However, extant data marshaled to support this view are also consistent with an opposing view that perceptuo-motor activations occur only fo...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2014.05.025

    authors: Amsel BD,Urbach TP,Kutas M

    更新日期:2014-10-01 00:00:00

  • Cerebellum and M1 interaction during early learning of timed motor sequences.

    abstract::We used positron emission tomography (PET) to examine within-day learning of timed motor sequences. The results of this experiment are novel in showing an interaction between cerebellum and primary motor cortex (M1) during learning that appears to be mediated by the dentate nucleus (DN) and in demonstrating that activ...

    journal_title:NeuroImage

    pub_type: 临床试验,杂志文章

    doi:10.1016/j.neuroimage.2005.02.041

    authors: Penhune VB,Doyon J

    更新日期:2005-07-01 00:00:00

  • Local and remote functional connectivity of neocortex under the inhibition influence.

    abstract::The current paper focuses on a relatively new and promising area of the study of EEG transformations during brain information processing based on the reduction of the signal to the discrete quasi-stationary segment sequences which may reflect individual brain microstates or discrete operations. In this framework, the ...

    journal_title:NeuroImage

    pub_type: 临床试验,杂志文章,随机对照试验

    doi:10.1016/j.neuroimage.2004.03.013

    authors: Fingelkurts AA,Fingelkurts AA,Kivisaari R,Pekkonen E,Ilmoniemi RJ,Kähkönen S

    更新日期:2004-07-01 00:00:00

  • Prospective motion correction of high-resolution magnetic resonance imaging data in children.

    abstract::Motion artifacts pose significant problems for the acquisition and analysis of high-resolution magnetic resonance imaging data. These artifacts can be particularly severe when studying pediatric populations, where greater patient movement reduces the ability to clearly view and reliably measure anatomy. In this study,...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2010.06.017

    authors: Brown TT,Kuperman JM,Erhart M,White NS,Roddey JC,Shankaranarayanan A,Han ET,Rettmann D,Dale AM

    更新日期:2010-10-15 00:00:00

  • Coupling of gamma band activity to sleep spindle oscillations - a combined EEG/MEG study.

    abstract::Sleep spindles are crucial to memory consolidation. Cortical gamma oscillations (30-100 Hz) are considered to reflect processing of memory in local cortical networks. The temporal and regulatory relationship between spindles and gamma activity might therefore provide clues into how sleep strengthens cortical memory re...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2020.117452

    authors: Weber FD,Supp GG,Klinzing JG,Mölle M,Engel AK,Born J

    更新日期:2021-01-01 00:00:00

  • Glucose metabolism of the midline nuclei raphe in the brainstem observed by PET-MRI fusion imaging.

    abstract:UNLABELLED:The brainstem contains various important monoaminergic neuronal centers, including the raphe nuclei which contain serotonergic neurons. The raphe nuclei, however, are not easily identifiable and located by conventional neuroimaging. METHODS:Fluorodeoxyglucose positron emission tomography (PET) and magnetic ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2011.09.036

    authors: Son YD,Cho ZH,Kim HK,Choi EJ,Lee SY,Chi JG,Park CW,Kim YB

    更新日期:2012-01-16 00:00:00

  • Vascular density and distribution in neocortex.

    abstract::An amazingly wide range of complex behavior emerges from the cerebral cortex. Much of the information processing that leads to these behaviors is performed in neocortical circuits that span throughout the six layers of the cortex. Maintaining this circuit activity requires substantial quantities of oxygen and energy s...

    journal_title:NeuroImage

    pub_type: 杂志文章,评审

    doi:10.1016/j.neuroimage.2017.06.046

    authors: Schmid F,Barrett MJP,Jenny P,Weber B

    更新日期:2019-08-15 00:00:00

  • Gastric fundic distension activates fronto-limbic structures but not primary somatosensory cortex: a functional magnetic resonance imaging study.

    abstract:INTRODUCTION:The brain representation of visceral stimulation bears important similarities to that of somatic stimulation. However, the role of the primary (S1) and secondary (S2) somatosensory cortices in mediating gastric sensation is uncertain. MATERIALS AND METHODS:Eighteen healthy, right-handed volunteers (age 32...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2006.07.033

    authors: Ladabaum U,Roberts TP,McGonigle DJ

    更新日期:2007-01-15 00:00:00

  • Extensive heterogeneity in white matter intensity in high-resolution T2*-weighted MRI of the human brain at 7.0 T.

    abstract::MRI at high magnetic field strength potentially allows for an increase in resolution and image contrast. The gains are particularly dramatic for T(2)(*)-weighted imaging, which is sensitive to susceptibility effects caused by a variety of sources, including deoxyhemoglobin, iron concentration, and tissue microstructur...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2006.05.053

    authors: Li TQ,van Gelderen P,Merkle H,Talagala L,Koretsky AP,Duyn J

    更新日期:2006-09-01 00:00:00

  • Voxel-based morphometry to detect brain atrophy in progressive mild cognitive impairment.

    abstract::Recent research has shown an increased rate of conversion to dementia in subjects with mild cognitive impairment (MCI) compared to controls. However, there are no specific methods to predict who will later develop dementia. In the present study, 22 controls and 56 MCI subjects were followed on average for 37 months (m...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2007.06.016

    authors: Hämäläinen A,Tervo S,Grau-Olivares M,Niskanen E,Pennanen C,Huuskonen J,Kivipelto M,Hänninen T,Tapiola M,Vanhanen M,Hallikainen M,Helkala EL,Nissinen A,Vanninen R,Soininen H

    更新日期:2007-10-01 00:00:00

  • Color responses and their adaptation in human superior colliculus and lateral geniculate nucleus.

    abstract::We use an fMRI adaptation paradigm to explore the selectivity of human responses in the lateral geniculate nucleus (LGN) and superior colliculus (SC) to red-green color and achromatic contrast. We measured responses to red-green (RG) and achromatic (ACH) high contrast sinewave counter-phasing rings with and without ad...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2016.04.067

    authors: Chang DHF,Hess RF,Mullen KT

    更新日期:2016-09-01 00:00:00

  • The problem of low variance voxels in statistical parametric mapping; a new hat avoids a 'haircut'.

    abstract::Statistical parametric mapping (SPM) locates significant clusters based on a ratio of signal to noise (a 'contrast' of the parameters divided by its standard error) meaning that very low noise regions, for example outside the brain, can attain artefactually high statistical values. Similarly, the commonly applied prep...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2011.10.027

    authors: Ridgway GR,Litvak V,Flandin G,Friston KJ,Penny WD

    更新日期:2012-02-01 00:00:00

  • Bottom up modeling of the connectome: linking structure and function in the resting brain and their changes in aging.

    abstract::With the increasing availability of advanced imaging technologies, we are entering a new era of neuroscience. Detailed descriptions of the complex brain network enable us to map out a structural connectome, characterize it with graph theoretical methods, and compare it to the functional networks with increasing detail...

    journal_title:NeuroImage

    pub_type: 杂志文章,评审

    doi:10.1016/j.neuroimage.2013.04.055

    authors: Nakagawa TT,Jirsa VK,Spiegler A,McIntosh AR,Deco G

    更新日期:2013-10-15 00:00:00

  • The New York Head-A precise standardized volume conductor model for EEG source localization and tES targeting.

    abstract::In source localization of electroencephalograpic (EEG) signals, as well as in targeted transcranial electric current stimulation (tES), a volume conductor model is required to describe the flow of electric currents in the head. Boundary element models (BEM) can be readily computed to represent major tissue compartment...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2015.12.019

    authors: Huang Y,Parra LC,Haufe S

    更新日期:2016-10-15 00:00:00

  • On clustering fMRI time series.

    abstract::Analysis of fMRI time series is often performed by extracting one or more parameters for the individual voxels. Methods based, e.g., on various statistical tests are then used to yield parameters corresponding to probability of activation or activation strength. However, these methods do not indicate whether sets of v...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1006/nimg.1998.0391

    authors: Goutte C,Toft P,Rostrup E,Nielsen F,Hansen LK

    更新日期:1999-03-01 00:00:00

  • Evaluating and validating two methods for estimating brain structure volumes: tessellation and simple pixel counting.

    abstract::Developments in imaging technology have made three-dimensional visualization of internal brain structures possible with excellent resolution. Since improved visualization implies improved measurement, these advances hold promise to more accurately measure the volumes of internal structures. As new technologies and tec...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1006/nimg.1994.1004

    authors: Arndt S,Swayze V,Cizadlo T,O'Leary D,Cohen G,Yuh WT,Ehrhardt JC,Andreasen NC

    更新日期:1994-06-01 00:00:00

  • Beta band modulations underlie action representations for movement planning.

    abstract::To be able to interact with our environment, we need to transform incoming sensory information into goal-directed motor outputs. Whereas our ability to plan an appropriate movement based on sensory information appears effortless and simple, the underlying brain dynamics are still largely unknown. Here we used magnetoe...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2016.05.027

    authors: Turella L,Tucciarelli R,Oosterhof NN,Weisz N,Rumiati R,Lingnau A

    更新日期:2016-08-01 00:00:00

  • Strategies for block-design fMRI experiments during task-related motion of structures of the oral cavity.

    abstract::Functional MRI (fMRI) studies of jaw motion, speech, and swallowing disorders have been hampered by motion artifacts. Tissue motion perturbs the static magnetic field, creating geometric distortions in echo-planar images that lead to many false positives in activation maps. These problems have restricted blood oxygena...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2005.08.063

    authors: Soltysik DA,Hyde JS

    更新日期:2006-02-15 00:00:00

  • Prediction of individual season of birth using MRI.

    abstract::Previous research suggests statistical associations between season of birth (SOB) with prevalence of neurobehavioral disorders such as schizophrenia and bipolar disorder, personality traits such as novelty and sensation seeking, and suicidal behavior. These effects are thought to be mediated by seasonal differences in...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2013.11.011

    authors: Pantazatos SP

    更新日期:2014-03-01 00:00:00

  • Pain phenotypes classified by machine learning using electroencephalography features.

    abstract::Pain is a multidimensional experience mediated by distributed neural networks in the brain. To study this phenomenon, EEGs were collected from 20 subjects with chronic lumbar radiculopathy, 20 age and gender matched healthy subjects, and 17 subjects with chronic lumbar pain scheduled to receive an implanted spinal cor...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2020.117256

    authors: Levitt J,Edhi MM,Thorpe RV,Leung JW,Michishita M,Koyama S,Yoshikawa S,Scarfo KA,Carayannopoulos AG,Gu W,Srivastava KH,Clark BA,Esteller R,Borton DA,Jones SR,Saab CY

    更新日期:2020-12-01 00:00:00

  • The same analysis approach: Practical protection against the pitfalls of novel neuroimaging analysis methods.

    abstract::Standard neuroimaging data analysis based on traditional principles of experimental design, modelling, and statistical inference is increasingly complemented by novel analysis methods, driven e.g. by machine learning methods. While these novel approaches provide new insights into neuroimaging data, they often have une...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2017.12.083

    authors: Görgen K,Hebart MN,Allefeld C,Haynes JD

    更新日期:2018-10-15 00:00:00

  • Dissociable neural systems for unconditioned acute and sustained fear.

    abstract::Fear protects organisms by increasing vigilance and preparedness, and by coordinating survival responses during life-threatening encounters. The fear circuit must thus operate on multiple timescales ranging from preparatory sustained alertness to acute fight-or-flight responses. Here we studied the brain basis of sust...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2020.116522

    authors: Hudson M,Seppälä K,Putkinen V,Sun L,Glerean E,Karjalainen T,Karlsson HK,Hirvonen J,Nummenmaa L

    更新日期:2020-08-01 00:00:00