The proteome response of salt-resistant and salt-sensitive barley genotypes to long-term salinity stress.

Abstract:

:Responses of plants to salinity stress and the development of salt tolerance are extremely complex. Proteomics is a powerful technique to identify proteins associated with a particular environmental or developmental signal. We employed a proteomic approach to further understand the mechanism of plant responses to salinity in a salt-tolerant (Afzal) and a salt-sensitive (Line 527) genotype of barley. At the 4-leaf stage, plants were exposed to 0 (control) or 300 mM NaCl. Salt treatment was maintained for 3 weeks. Total proteins of leaf 4 were extracted and separated by two-dimensional gel electrophoresis. More than 500 protein spots were reproducibly detected. Of these, 44 spots showed significant changes to salt treatment compared to the control: 43 spots were upregulated and 1 spot was downregulated. Using MALDI-TOF-TOF MS, we identified 44 cellular proteins have been identified, which represented 18 different proteins and were classified into seven categories and a group with unknown biological function. These proteins were involved in various many cellular functions. Up regulation of proteins which involved in reactive oxygen species scavenging, signal transduction, protein processing and cell wall may increase plant adaptation to salt stress. The upregulation of the three of four antioxidant proteins (thioredoxin, methionine sulfoxide reductase and dehydroascorbate reductase) in susceptible genotype Line 527 suggesting a different tolerance mechanism (such as tissue tolerance) to tolerate a salinity condition in comparison with the salt sensitive genotype.

journal_name

Mol Biol Rep

authors

Fatehi F,Hosseinzadeh A,Alizadeh H,Brimavandi T,Struik PC

doi

10.1007/s11033-012-1460-z

subject

Has Abstract

pub_date

2012-05-01 00:00:00

pages

6387-97

issue

5

eissn

0301-4851

issn

1573-4978

journal_volume

39

pub_type

杂志文章
  • Polymorphisms of β-defensin genes in Valle del Belice dairy sheep.

    abstract::The aim of this work was to study β-defensin 1 (SBD1) and β-defensin 2 (SBD2) genes in Valle del Belice dairy sheep in order to identify polymorphisms that can be utilized as markers of the analyzed genes, and search for the functional effects and roles of the identified polymorphisms (variation of the amino acid sequ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-0694-5

    authors: Monteleone G,Calascibetta D,Scaturro M,Galluzzo P,Palmeri M,Riggio V,Portolano B

    更新日期:2011-11-01 00:00:00

  • The integrative regulatory network of circRNA and microRNA in keloid scarring.

    abstract::Circular RNA (circRNA), a novel type of non-coding RNA that consists of a circular loop, has been demonstrated to act as a "sponge" for microRNAs (miRNAs). However, the role of circRNAs in keloid remains unknown. In this study, we investigated circRNA expression profiles in keloid to identify potential diagnostic and ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-05120-y

    authors: Shi J,Yao S,Chen P,Yang Y,Qian M,Han Y,Wang N,Zhao Y,He Y,Lyu L,Lu D

    更新日期:2020-01-01 00:00:00

  • Cloning and characterization of a novel apolipoprotein gene, apolipoprotein AV, in tree shrews.

    abstract::Apolipoprotein AV (apoAV) modulates plasma triglyceride levels, which is an independent risk factor for cardiovascular disease. ApoAV is also involved in atherosclerosis lesion formation. In order to systematically evaluate the apolipoprotein-related gene profile in tree shrew, a model for its insusceptibility to athe...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-013-2641-0

    authors: Li G,Luo H,Sun G,Wu G,Wu G,Wang Y,Man Y,Wang S,Li J,Chen B

    更新日期:2013-09-01 00:00:00

  • Gallic and vanillic acid suppress inflammation and promote myelination in an in vitro mouse model of neurodegeneration.

    abstract::Neuroinflammation affects millions of people around the world as a result of injury or stress. Neuroinflammation represents almost all types of neurological diseases such as multiple sclerosis and Alzheimer's disease. Neurodegenerative diseases comprise demyelination and synaptic loss. The inflammatory response is fur...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-018-4557-1

    authors: Siddiqui S,Kamal A,Khan F,Jamali KS,Saify ZS

    更新日期:2019-02-01 00:00:00

  • Isolation and characterization of microsatellite markers in two species of the neotropical Epicharis (Hymenoptera, Apidae, Centridini) genus and cross-amplification in related species.

    abstract::Genetics can provide invaluable tools for management and conservation of bee populations, which are declining worldwide. Among these tools, microsatellite are very useful molecular markers for population analyses. The aim of this study was to isolate and characterize microsatellites for Epicharis (Anepicharis) dejeani...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-06076-0

    authors: Souza-Shibatta L,Ricardo PC,Pina WC,Flaresso-Neto V,Freiria GA,Kotelok-Diniz T,Gaglianone MC,Arias MC,Sofia SH

    更新日期:2021-01-21 00:00:00

  • Construction of recombinant proteins for reprogramming of endangered Luxi cattle fibroblast cells.

    abstract::Generation of induced pluripotent stem cells from endangered cattle breeds makes a significant contribution to the establishment of embryonic stem cell line, conservation and utilization of genetic resources in endangered cattle. In our study, we are trying to construct recombinant proteins of transcription factors Oc...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1549-4

    authors: Hu PF,Guan WJ,Li XC,Ma YH

    更新日期:2012-06-01 00:00:00

  • Gel based in vitro 3D model exploring the osteocytic potentiality of human CD34+ stem cells.

    abstract::Osteocytic potentiality of human CD34+ stem cells explored in the present study by generating in vitro agarose gel 3D model to understand the bone ossification process. The G-CSF and IL-3 mobilized human CD34+ stem cells isolated apheretically from donor peripheral blood and purity of the cells was assessed by FACS an...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-016-4053-4

    authors: Srikanth L,Sunitha MM,Kumar PS,Chandrasekhar C,Vengamma B,Sarma PV

    更新日期:2016-11-01 00:00:00

  • Perspectives on zinc finger protein function and evolution--an update.

    abstract::Complexity is one of the hallmarks that applies to C2H2 type zinc finger proteins (ZFPs). Structurally distinct clusters of zinc finger modules define an extremely large superfamily of nucleic acid binding proteins with several hundred, perhaps thousands of different members in vertebrates. Recent discoveries have pro...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/BF00999848

    authors: Pieler T,Bellefroid E

    更新日期:1994-07-01 00:00:00

  • TGF-β superfamily: how does it regulate testis development.

    abstract::Testis development is a highly regulated sequence of developmental process that spans from the establishment of germ cell lineage during embryonic development to the periodic wave of spermatogenesis in adulthood. The normal development of testes and the fertility of male animals require specific cell types to respond ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/s11033-011-1265-5

    authors: Fan YS,Hu YJ,Yang WX

    更新日期:2012-04-01 00:00:00

  • Characterization of 4 TaGAST genes during spike development and seed germination and their response to exogenous phytohormones in common wheat.

    abstract::Gibberellic acid (GA) is involved in the regulation of plant growth and development. We defined GA-stimulated transcript (GAST) gene family and characterized its four members (TaGAST1, 2, 3, and 4) in wheat spikes. Triticum aestivum whole spikes were collected at ten developmental stages and dehulled spikelets were ob...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-016-4077-9

    authors: Kim YJ,Kim JY,Yoon JS,Kim DY,Hong MJ,Seo YW

    更新日期:2016-12-01 00:00:00

  • Characterization and expression profile analysis of a sucrose synthase gene from common bean (Phaseolus vulgaris L.) during seed development.

    abstract::A full-length cDNA encoding common bean (Phaseolus vulgaris L.) sucrose synthase (designated as Pv_BAT93 Sus), which catalyses the synthesis and cleavage of sucrose, was isolated from seeds at 15 days after pollination (DAP) by rapid amplification of cDNA ends (RACE). The full-length cDNA of Pv_BAT93 Sus had a 2,418 b...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-0842-y

    authors: Abid G,Muhovski Y,Jacquemin JM,Mingeot D,Sassi K,Toussaint A,Baudoin JP

    更新日期:2012-02-01 00:00:00

  • Effect of BRAF V600E mutation on tumor response of anti-EGFR monoclonal antibodies for first-line metastatic colorectal cancer treatment: a meta-analysis of randomized studies.

    abstract::Anti-EGFR monoclonal antibodies (anti-EGFR MoAbs) in metastatic colorectal cancer (mCRC) treatment are still not effective in all patients. This study aimed to evaluate the relationship between BRAF V600E mutation and the tumor response of anti-EGFR MoAbs for first-line treatment in mCRC patients. We searched the MEDL...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,meta分析

    doi:10.1007/s11033-013-2974-8

    authors: Cui D,Cao D,Yang Y,Qiu M,Huang Y,Yi C

    更新日期:2014-03-01 00:00:00

  • cDNA cloning and characterization of 5' upstream promoter region of porcine mef2c gene.

    abstract::The myocyte enhancer factor 2C (MEF2C) is a member of the MEF2 family of transcription factors, involved in skeletal muscle development. In this study we report the cDNA sequence and isolate the 5' upstream region of the mef2c gene from porcine genomic DNA using PCR-based GenomeWalker. The open reading frame of porcin...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-010-0609-x

    authors: Liu M,Xu DQ,Peng J,Zheng R,Li F,Jiang SW

    更新日期:2011-10-01 00:00:00

  • Inhibition of the oxidative stress-induced miR-23a protects the human retinal pigment epithelium (RPE) cells from apoptosis through the upregulation of glutaminase and glutamine uptake.

    abstract::The degeneration of retinal pigment epithelium (RPE) cells in the sub retinal pigment epithelial space and choroid is an initial pathological characteristic for the age-related macular degeneration which is the leading cause of severe vision loss in old people. Moreover, oxidative stress is implicated as a major induc...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-016-4041-8

    authors: Li DD,Zhong BW,Zhang HX,Zhou HY,Luo J,Liu Y,Xu GC,Luan CS,Fang J

    更新日期:2016-10-01 00:00:00

  • Isolation and characterization of a gene encoding an ethylene responsive factor protein from Ceratoides arborescens.

    abstract::Ethylene responsive factor (ERF) proteins play important roles in plant growth and development and regulate biotic and abiotic stress responses. In this study, a full length mRNA encoding a novel ERF-type transcription factor namely Ceratoides arborescens ERF protein (CeERF) was isolated from C. arborescens. The deduc...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-0869-0

    authors: Dong J,Wang X,Wang K,Wang Z,Gao H

    更新日期:2012-02-01 00:00:00

  • Current insight into the roles of microRNA in vitiligo.

    abstract::Vitiligo is a common chronic depigmented skin disease characterized by melanocyte loss or dysfunction in the lesion. The pathogenesis of vitiligo has not been fully clarified. Most studies have suggested that the occurrence and progression of vitiligo are due to multiple factors and gene interactions in which noncodin...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/s11033-020-05336-3

    authors: Yan S,Shi J,Sun D,Lyu L

    更新日期:2020-04-01 00:00:00

  • Molecular cloning and characterization of a 2C-methyl-D: -erythritol 2,4-cyclodiphosphate synthase gene from Cephalotaxus harringtonia.

    abstract::The full-length MECPS cDNA sequence (designated as Chmecps, GenBank Accession No.: DQ415658) was isolated by rapid amplification of cDNA ends (RACE) for the first time from Cephalotaxus harringtonia. The full-length cDNA of Chmecps was 1,146 bp containing a 753 bp open reading frame (ORF) encoding a polypeptide of 250...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-008-9377-2

    authors: Chen J,Xiao Y,Di P,Yu X,Chen W,Zhang L

    更新日期:2009-09-01 00:00:00

  • Cofactor analogue-induced chemical reactivation of endonuclease activity in a DNA cleavage/methylation deficient TspGWI N₄₇₃A variant in the NPPY motif.

    abstract::We reported previously that TspGWI, a prototype enzyme of a new Thermus sp. family of restriction endonucleases-methyltransferases (REases-MTases), undergoes the novel phenomenon of sinefungin (SIN)-caused specificity transition. Here we investigated mutant TspGWI N473A, containing a single amino acid (aa) substitutio...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3085-x

    authors: Zylicz-Stachula A,Jeżewska-Frąckowiak J,Skowron PM

    更新日期:2014-01-01 00:00:00

  • Investigation of 8-methoxy-3-(4-nitrobenzoyl)-6-propyl-2H-chromen-2-one as a promising coumarin compound for the development of a new and orally effective antileishmanial agent.

    abstract::Changes in host immunity and parasite resistance to drugs are among the factors that contribute to decreased efficacy of antiparasitic drugs such as the antimonial compounds pentamidine, amphotericin (AMP B) and miltefosine. Bioactive natural products could be alternatives for the development of new drugs to treat neg...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-020-05887-5

    authors: de Figueiredo Peloso E,Merli RJ,Espuri PF,Nunes JB,Colombo FA,Sierra EJT,de Paulo DC,Dos Santos MH,Carvalho DT,Marques MJ

    更新日期:2020-11-01 00:00:00

  • Cloning, expression and characterization of a novel human VMP gene.

    abstract::We report here cloning and characterization of a novel human gene, termed VMP, which is a vesicular membrane protein. RT-PCR analysis shows that VMP is expressed exclusively in brain of the 16 tissues examined, suggesting that it is a neuron-specific membrane protein. The cDNA encodes 195 amino acid with a putative mo...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1023/a:1020402410522

    authors: Cheng C,Xu J,Ye X,Dai J,Wu Q,Zeng L,Wang L,Zhao W,Ji C,Gu S,Xie Y,Mao Y

    更新日期:2002-09-01 00:00:00

  • Transcriptome profiling and molecular marker discovery in red pepper, Capsicum annuum L. TF68.

    abstract::Transcriptome from high throughput sequencing-by-synthesis is a good resource of molecular markers. In this study, we present utility of massively parallel sequencing by synthesis for profiling the transcriptome of red pepper (Capsicum annuum L. TF68) using 454 GS-FLX pyrosequencing. Through the generation of approxim...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-011-1102-x

    authors: Lu FH,Cho MC,Park YJ

    更新日期:2012-03-01 00:00:00

  • Molecular cloning of the goose ACSL3 and ACSL5 coding domain sequences and their expression characteristics during goose fatty liver development.

    abstract::It has been demonstrated that ACSL3 and ACSL5 play important roles in fat metabolism. To investigate the primary functions of ACSL3 and ACSL5 and to evaluate their expression levels during goose fatty liver development, we cloned the ACSL3 and ACSL5 coding domain sequences (CDSs) of geese using RT-PCR and analyzed the...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3053-5

    authors: He H,Liu HH,Wang JW,Lv J,Li L,Pan ZX

    更新日期:2014-01-01 00:00:00

  • Salvia lachnostachys Benth has antitumor and chemopreventive effects against solid Ehrlich carcinoma.

    abstract::Salvia lachnostachys is an herbaceous plant with anti-inflammatory, analgesic and cytotoxic properties. This study investigated the antitumor effect of an ethanolic extract of Salvia lachnostachys leaves (EES) in a solid Ehrlich carcinoma model. Ehrlich cells were inoculated subcutaneously in the right pelvic member (...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-019-04931-3

    authors: Corso CR,Stipp MC,Adami ER,da Silva LM,Mariott M,de Andrade SF,de Souza Ramos EA,Klassen G,Beltrame OC,Queiroz-Telles JE,de Oliveira CS,Stefanello MÉA,Acco A

    更新日期:2019-10-01 00:00:00

  • Staphylococcus aureus mobile genetic elements.

    abstract::Among the bacteria groups, most of them are known to be beneficial to human being whereas only a minority is being recognized as harmful. The pathogenicity of bacteria is due, in part, to their rapid adaptation in the presence of selective pressures exerted by the human host. In addition, through their genomes, bacter...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,评审

    doi:10.1007/s11033-014-3367-3

    authors: Alibayov B,Baba-Moussa L,Sina H,Zdeňková K,Demnerová K

    更新日期:2014-08-01 00:00:00

  • Real-time detection of BRAF V600E mutation from archival hairy cell leukemia FFPE tissue by nanopore sequencing.

    abstract::The MinION is a miniaturized high-throughput next generation sequencing platform of novel conception. The use of nucleic acids derived from formalin-fixed paraffin-embedded samples is highly desirable, but their adoption for molecular assays is hurdled by the high degree of fragmentation and by the chemical-induced mu...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-017-4133-0

    authors: Vacca D,Cancila V,Gulino A,Lo Bosco G,Belmonte B,Di Napoli A,Florena AM,Tripodo C,Arancio W

    更新日期:2018-02-01 00:00:00

  • Overexpression of AtDREB1D transcription factor improves drought tolerance in soybean.

    abstract::Drought is one of the major abiotic stresses that affect productivity in soybean (Glycine max L.) Several genes induced by drought stress include functional genes and regulatory transcription factors. The Arabidopsis thaliana DREB1D transcription factor driven by the constitutive and ABA-inducible promoters was introd...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-014-3695-3

    authors: Guttikonda SK,Valliyodan B,Neelakandan AK,Tran LS,Kumar R,Quach TN,Voothuluru P,Gutierrez-Gonzalez JJ,Aldrich DL,Pallardy SG,Sharp RE,Ho TH,Nguyen HT

    更新日期:2014-12-01 00:00:00

  • Associations between TNF-α -308 A/G and lymphotoxin-α +252 A/G polymorphisms and susceptibility to sarcoidosis: a meta-analysis.

    abstract::Several studies have examined the effects of the tumor necrosis factor-α (TNF-α) -308 A/G and lymphotoxin-α (LT-α) +252 A/G polymorphisms on susceptibility to sarcoidosis, showing mixed results. The purpose of this study was to examine whether the TNF-α -308 A/G and LT-α +252 A/G polymorphisms confer susceptibility to...

    journal_title:Molecular biology reports

    pub_type: 杂志文章,meta分析

    doi:10.1007/s11033-013-2859-x

    authors: Song GG,Kim JH,Lee YH

    更新日期:2014-01-01 00:00:00

  • Cucumber mosaic virus RNA contains 7-methyl guanosine at the 5'-terminus of all four RNA species.

    abstract::Purified cucumber mosaic virus (CMV) RNA was reacted with NaIO4 and then [3H]KBH4 to label ends containing exposed 2',3'-hydroxyls. The four major RNA species were then fractionated by polyacrylamide gel electrophoresis. Analysis of digests of these RNAs by ribonucleases T1 plus T2, alkaline phosphatease, snake venom ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/BF00357014

    authors: Symons RH

    更新日期:1975-12-01 00:00:00

  • Hydrostatic and osmotic pressure study of the RNA hydration.

    abstract::The tertiary structure of nucleic acids results from an equilibrium between electrostatic interactions of phosphates, stacking interactions of bases, hydrogen bonds between polar atoms and water molecules. Water interactions with ribonucleic acid play a key role in its structure formation, stabilization and dynamics. ...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-012-1452-z

    authors: Giel-Pietraszuk M,Barciszewski J

    更新日期:2012-05-01 00:00:00

  • Identification and characterization of two chrysanthemum (Dendronthema x moriforlium) DREB genes, belonging to the AP2/EREBP family.

    abstract::Two DREB-like genes, designated as DmDREBa and DmDREBb, were isolated from chrysanthemum by RACE approach. The DmDREBa and DmDREBb genes encoded proteins of 191 and 185 amino acid residues with the predicted molecular mass of 21.66 and 20.99 kDa, respectively. Both DmDREBs proteins comprised a typical EREBP/AP2 domain...

    journal_title:Molecular biology reports

    pub_type: 杂志文章

    doi:10.1007/s11033-007-9153-8

    authors: Yang Y,Wu J,Zhu K,Liu L,Chen F,Yu D

    更新日期:2009-01-01 00:00:00