Synthetic lethal compound combinations reveal a fundamental connection between wall teichoic acid and peptidoglycan biosyntheses in Staphylococcus aureus.

Abstract:

:Methicillin resistance in Staphylococcus aureus depends on the production of mecA, which encodes penicillin-binding protein 2A (PBP2A), an acquired peptidoglycan transpeptidase (TP) with reduced susceptibility to β-lactam antibiotics. PBP2A cross-links nascent peptidoglycan when the native TPs are inhibited by β-lactams. Although mecA expression is essential for β-lactam resistance, it is not sufficient. Here we show that blocking the expression of wall teichoic acids (WTAs) by inhibiting the first enzyme in the pathway, TarO, sensitizes methicillin-resistant S. aureus (MRSA) strains to β-lactams even though the β-lactam-resistant transpeptidase, PBP2A, is still expressed. The dramatic synergy between TarO inhibitors and β-lactams is noteworthy not simply because strategies to overcome MRSA are desperately needed but because neither TarO nor the activities of the native TPs are essential in MRSA strains. The "synthetic lethality" of inhibiting TarO and the native TPs suggests a functional connection between ongoing WTA expression and peptidoglycan assembly in S. aureus. Indeed, transmission electron microscopy shows that S. aureus cells blocked in WTA synthesis have extensive defects in septation and cell separation, indicating dysregulated cell wall assembly and degradation. Our studies imply that WTAs play a fundamental role in S. aureus cell division and raise the possibility that synthetic lethal compound combinations may have therapeutic utility for overcoming antibiotic-resistant bacterial infections.

journal_name

ACS Chem Biol

journal_title

ACS chemical biology

authors

Campbell J,Singh AK,Santa Maria JP Jr,Kim Y,Brown S,Swoboda JG,Mylonakis E,Wilkinson BJ,Walker S

doi

10.1021/cb100269f

subject

Has Abstract

pub_date

2011-01-21 00:00:00

pages

106-16

issue

1

eissn

1554-8929

issn

1554-8937

journal_volume

6

pub_type

杂志文章
  • Fluorescent Chemosensors as Future Tools for Cancer Biology.

    abstract::It is well established that aberrant cellular biochemical activity is strongly linked to the formation and progression of various cancers. Assays that could aid in cancer diagnostics, assessing anticancer drug resistance, and in the discovery of new anticancer drugs are highly warranted. In recent years, a large numbe...

    journal_title:ACS chemical biology

    pub_type: 杂志文章,评审

    doi:10.1021/acschembio.8b00014

    authors: Singh K,Rotaru AM,Beharry AA

    更新日期:2018-07-20 00:00:00

  • Fragment Assembly Approach Based on Graph/Network Theory with Quantum Chemistry Verifications for Assigning Multidimensional NMR Signals in Metabolite Mixtures.

    abstract::The abundant observation of chemical fragment information for molecular complexities is a major advantage of biological NMR analysis. Thus, the development of a novel technique for NMR signal assignment and metabolite identification may offer new possibilities for exploring molecular complexities. We propose a new sig...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.5b00894

    authors: Ito K,Tsutsumi Y,Date Y,Kikuchi J

    更新日期:2016-04-15 00:00:00

  • Peripheral protein organization and its influence on lipid diffusion in biomimetic membranes.

    abstract::Protein organization on biomembranes and their dynamics are essential for cellular function. It is not clear, however, how protein binding may influence the assembly of underlying lipids or how the membrane structure leads to functional protein organization. Toward this goal, we investigated the effects of annexin a5 ...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb900303s

    authors: Vats K,Knutson K,Hinderliter A,Sheets ED

    更新日期:2010-04-16 00:00:00

  • Enzymatic synthesis of polybrominated dioxins from the marine environment.

    abstract::Polyhalogenated dibenzo-p-dioxins are arguably among the most toxic molecules known to man. In addition to anthropogenic sources, marine invertebrates also harbor polybrominated dibenzo-p-dioxins of as yet unknown biogenic origin. Here, we report that the bmp gene locus in marine bacteria, a recently characterized sou...

    journal_title:ACS chemical biology

    pub_type: 信件

    doi:10.1021/cb5004338

    authors: Agarwal V,Moore BS

    更新日期:2014-09-19 00:00:00

  • Structural Basis for the Stereochemical Control of Amine Installation in Nucleotide Sugar Aminotransferases.

    abstract::Sugar aminotransferases (SATs) are an important class of tailoring enzymes that catalyze the 5'-pyridoxal phosphate (PLP)-dependent stereo- and regiospecific installation of an amino group from an amino acid donor (typically L-Glu or L-Gln) to a corresponding ketosugar nucleotide acceptor. Herein we report the strateg...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.5b00244

    authors: Wang F,Singh S,Xu W,Helmich KE,Miller MD,Cao H,Bingman CA,Thorson JS,Phillips GN Jr

    更新日期:2015-09-18 00:00:00

  • A synthetic recursive "+1" pathway for carbon chain elongation.

    abstract::Nature uses four methods of carbon chain elongation for the production of 2-ketoacids, fatty acids, polyketides, and isoprenoids. Using a combination of quantum mechanical (QM) modeling, protein-substrate modeling, and protein and metabolic engineering, we have engineered the enzymes involved in leucine biosynthesis f...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb200313e

    authors: Marcheschi RJ,Li H,Zhang K,Noey EL,Kim S,Chaubey A,Houk KN,Liao JC

    更新日期:2012-04-20 00:00:00

  • Characterization of an Antibacterial Agent Targeting Ferrous Iron Transport Protein FeoB against Staphylococcus aureus and Gram-Positive Bacteria.

    abstract::The emergence of multidrug-resistant Staphylococcus aureus strains has become a serious clinical problem. Iron is absolutely required for the bacterial growth, virulence associated with colonization, and survival from the host immune system. The FeoB protein is a major iron permease in bacterial ferrous iron transport...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.0c00842

    authors: Shin M,Jin Y,Park J,Mun D,Kim SR,Payne SM,Kim KH,Kim Y

    更新日期:2021-01-15 00:00:00

  • Design, synthesis, and biological activity of a potent Smac mimetic that sensitizes cancer cells to apoptosis by antagonizing IAPs.

    abstract::Designed second mitochondrial activator of caspases (Smac) mimetics based on an accessible [7,5]-bicyclic scaffold bind to and antagonize protein interactions involving the inhibitor of apoptosis (IAP) proteins, X-chromosome-linked IAP (XIAP), melanoma IAP (ML-IAP), and c-IAPs 1 and 2 (cIAP1 and cIAP2). The design rat...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb600276q

    authors: Zobel K,Wang L,Varfolomeev E,Franklin MC,Elliott LO,Wallweber HJ,Okawa DC,Flygare JA,Vucic D,Fairbrother WJ,Deshayes K

    更新日期:2006-09-19 00:00:00

  • Advances in the Chemical Biology of Desferrioxamine B.

    abstract::Desferrioxamine B (DFOB) was discovered in the late 1950s as a hydroxamic acid metabolite of the soil bacterium Streptomyces pilosus. The exquisite affinity of DFOB for Fe(III) identified its potential for removing excess iron from patients with transfusion-dependent hemoglobin disorders. Many studies have used semisy...

    journal_title:ACS chemical biology

    pub_type: 杂志文章,评审

    doi:10.1021/acschembio.7b00851

    authors: Codd R,Richardson-Sanchez T,Telfer TJ,Gotsbacher MP

    更新日期:2018-01-19 00:00:00

  • Extreme entropy-enthalpy compensation in a drug-resistant variant of HIV-1 protease.

    abstract::The development of HIV-1 protease inhibitors has been the historic paradigm of rational structure-based drug design, where structural and thermodynamic analyses have assisted in the discovery of novel inhibitors. While the total enthalpy and entropy change upon binding determine the affinity, often the thermodynamics ...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb300191k

    authors: King NM,Prabu-Jeyabalan M,Bandaranayake RM,Nalam MN,Nalivaika EA,Özen A,Haliloğlu T,Yilmaz NK,Schiffer CA

    更新日期:2012-09-21 00:00:00

  • Modular strategy for the semisynthesis of a K+ channel: investigating interactions of the pore helix.

    abstract::Chemical synthesis is a powerful method for precise modification of the structural and electronic properties of proteins. The difficulties in the synthesis and purification of peptides containing transmembrane segments have presented obstacles to the chemical synthesis of integral membrane proteins. Here, we present a...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb900210r

    authors: Komarov AG,Linn KM,Devereaux JJ,Valiyaveetil FI

    更新日期:2009-12-18 00:00:00

  • Engineering Intracellularly Retained Gaussia Luciferase Reporters for Improved Biosensing and Molecular Imaging Applications.

    abstract::Gaussia luciferase (GLUC) is a bioluminescent reporter protein of increasing importance. As a secretory protein, it has increased sensitivity in vitro and in vivo (∼20 000-fold, and ∼1000-fold, respectively) over its competitor, secreted alkaline phosphatase. Unfortunately, this same advantageous secretory nature of G...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.7b00454

    authors: Gaur S,Bhargava-Shah A,Hori S,Afjei R,Sekar TV,Gambhir SS,Massoud TF,Paulmurugan R

    更新日期:2017-09-15 00:00:00

  • Characterization of CYP115 As a Gibberellin 3-Oxidase Indicates That Certain Rhizobia Can Produce Bioactive Gibberellin A4.

    abstract::The gibberellin (GA) phytohormones are produced not only by plants but also by fungi and bacteria. Previous characterization of a cytochrome P450 (CYP)-rich GA biosynthetic operon found in many symbiotic, nitrogen-fixing rhizobia led to the elucidation of bacterial GA biosynthesis and implicated GA9 as the final produ...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.6b01038

    authors: Nett RS,Contreras T,Peters RJ

    更新日期:2017-04-21 00:00:00

  • Expanding the genetic code of Caenorhabditis elegans using bacterial aminoacyl-tRNA synthetase/tRNA pairs.

    abstract::The genetic code specifies 20 common amino acids and is largely preserved in both single and multicellular organisms. Unnatural amino acids (Uaas) have been genetically incorporated into proteins by using engineered orthogonal tRNA/aminoacyl-tRNA synthetase (RS) pairs, enabling new research capabilities and precision ...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb200542j

    authors: Parrish AR,She X,Xiang Z,Coin I,Shen Z,Briggs SP,Dillin A,Wang L

    更新日期:2012-07-20 00:00:00

  • Characterization of a Prenyltransferase for Iso-A82775C Biosynthesis and Generation of New Congeners of Chloropestolides.

    abstract::Chloropupukeananin and chloropestolides are novel metabolites of the plant endophyte Pestalotiopsis fici, showing antimicrobial, antitumor, and anti-HIV activities. Their highly complex and unique skeletons were generated from the coisolated pestheic acid (1) and iso-A82775C (10) based on our previous studies. Here, w...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.7b01059

    authors: Pan Y,Liu L,Guan F,Li E,Jin J,Li J,Che Y,Liu G

    更新日期:2018-03-16 00:00:00

  • Lipid nanoparticles improve activity of single-stranded siRNA and gapmer antisense oligonucleotides in animals.

    abstract::We evaluated the abilities of an antisense oligonucleotide (ASO), a small interfering RNA (siRNA), and a single-stranded siRNA (ss-siRNA) to inhibit expression from the PTEN gene in mice when formulated identically with lipid nanoparticles (LNPs). Significantly greater reductions in levels of PTEN mRNA were observed f...

    journal_title:ACS chemical biology

    pub_type: 信件

    doi:10.1021/cb4001316

    authors: Prakash TP,Lima WF,Murray HM,Elbashir S,Cantley W,Foster D,Jayaraman M,Chappell AE,Manoharan M,Swayze EE,Crooke ST

    更新日期:2013-07-19 00:00:00

  • Features of modularly assembled compounds that impart bioactivity against an RNA target.

    abstract::Transcriptomes provide a myriad of potential RNAs that could be the targets of therapeutics or chemical genetic probes of function. Cell-permeable small molecules, however, generally do not exploit these targets, owing to the difficulty in the design of high affinity, specific small molecules targeting RNA. As part of...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb400265y

    authors: Rzuczek SG,Gao Y,Tang ZZ,Thornton CA,Kodadek T,Disney MD

    更新日期:2013-10-18 00:00:00

  • Chemical Proteomics and Structural Biology Define EPHA2 Inhibition by Clinical Kinase Drugs.

    abstract::The receptor tyrosine kinase EPHA2 (Ephrin type-A receptor 2) plays important roles in oncogenesis, metastasis, and treatment resistance, yet therapeutic targeting, drug discovery, or investigation of EPHA2 biology is hampered by the lack of appropriate inhibitors and structural information. Here, we used chemical pro...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.6b00709

    authors: Heinzlmeir S,Kudlinzki D,Sreeramulu S,Klaeger S,Gande SL,Linhard V,Wilhelm M,Qiao H,Helm D,Ruprecht B,Saxena K,Médard G,Schwalbe H,Kuster B

    更新日期:2016-12-16 00:00:00

  • Cyanopyrrolidine Inhibitors of Ubiquitin Specific Protease 7 Mediate Desulfhydration of the Active-Site Cysteine.

    abstract::Ubiquitin specific protease 7 (USP7) regulates the protein stability of key cellular regulators in pathways ranging from apoptosis to neuronal development, making it a promising therapeutic target. Here we used an engineered, activated variant of the USP7 catalytic domain to perform structure-activity studies of elect...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.0c00031

    authors: Bashore C,Jaishankar P,Skelton NJ,Fuhrmann J,Hearn BR,Liu PS,Renslo AR,Dueber EC

    更新日期:2020-06-19 00:00:00

  • Generation of Optogenetically Modified Adenovirus Vector for Spatiotemporally Controllable Gene Therapy.

    abstract::Gene therapy is expected to be utilized for the treatment of various diseases. However, the spatiotemporal resolution of current gene therapy technology is not high enough. In this study, we generated a new technology for spatiotemporally controllable gene therapy. We introduced optogenetic and CRISPR/Cas9 techniques ...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.7b01058

    authors: Takayama K,Mizuguchi H

    更新日期:2018-02-16 00:00:00

  • Structural Insights into the Interaction of Clinically Relevant Phosphorothioate mRNA Cap Analogs with Translation Initiation Factor 4E Reveal Stabilization via Electrostatic Thio-Effect.

    abstract::mRNA-based therapies and vaccines constitute a disruptive technology with the potential to revolutionize modern medicine. Chemically modified 5' cap structures have provided access to mRNAs with superior translational properties that could benefit the currently flourishing mRNA field. Prime examples of compounds that ...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.0c00864

    authors: Warminski M,Kowalska J,Nowak E,Kubacka D,Tibble R,Kasprzyk R,Sikorski PJ,Gross JD,Nowotny M,Jemielity J

    更新日期:2021-01-13 00:00:00

  • Evaluation of analogues of GalNAc as substrates for enzymes of the mammalian GalNAc salvage pathway.

    abstract::Changes in glycosylation are correlated to disease and associated with differentiation processes. Experimental tools are needed to investigate the physiological implications of these changes either by labeling of the modified glycans or by blocking their biosynthesis. N-Acetylgalactosamine (GalNAc) is a monosaccharide...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb200511t

    authors: Pouilly S,Bourgeaux V,Piller F,Piller V

    更新日期:2012-04-20 00:00:00

  • Diverse Class 2 CRISPR-Cas Effector Proteins for Genome Engineering Applications.

    abstract::CRISPR-Cas genome editing technologies have revolutionized modern molecular biology by making targeted DNA edits simple and scalable. These technologies are developed by domesticating naturally occurring microbial adaptive immune systems that display wide diversity of functionality for targeted nucleic acid cleavage. ...

    journal_title:ACS chemical biology

    pub_type: 杂志文章,评审

    doi:10.1021/acschembio.7b00800

    authors: Pyzocha NK,Chen S

    更新日期:2018-02-16 00:00:00

  • Inhibition of angiogenesis by the antifungal drug itraconazole.

    abstract::Angiogenesis, the formation of new blood vessels, is implicated in a number of important human diseases, including cancer, diabetic retinopathy, and rheumatoid arthritis. To identify clinically useful angiogenesis inhibitors, we assembled and screened a library of mostly Food and Drug Administration-approved drugs for...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb600362d

    authors: Chong CR,Xu J,Lu J,Bhat S,Sullivan DJ Jr,Liu JO

    更新日期:2007-04-24 00:00:00

  • Chemical modification of conotoxins to improve stability and activity.

    abstract::Conotoxins are small disulfide-rich peptides from the venom of cone snails. Along with other conopeptides, they target a wide range of membrane receptors, ion channels, and transporters, and because of their high potency and selectivity for defined subtypes of these receptors, they have attracted a great deal of atten...

    journal_title:ACS chemical biology

    pub_type: 杂志文章,评审

    doi:10.1021/cb700091j

    authors: Craik DJ,Adams DJ

    更新日期:2007-07-20 00:00:00

  • Using small molecules and chemical genetics to interrogate signaling networks.

    abstract::The limited clinical success of therapeutics targeting cellular signaling processes is due to multiple factors, including off-target effects and complex feedback regulation encoded within the signaling network. To understand these effects, chemical proteomics and chemical genetics tools have been developed to map the ...

    journal_title:ACS chemical biology

    pub_type: 杂志文章,评审

    doi:10.1021/cb1002834

    authors: Carlson SM,White FM

    更新日期:2011-01-21 00:00:00

  • Yersinia inhibits host signaling by acetylating MAPK kinases.

    abstract::Pathogenic Yersinia spp. secrete the effector YopJ (YopP) into host cells to counteract cytokine production and to induce programmed cell death (apoptosis). YopJ achieves these aims by inactivating mitogen-activated protein kinase (MAPK) and nuclear factor kappaB signaling pathways. YopJ was shown to bind to members o...

    journal_title:ACS chemical biology

    pub_type: 杂志文章,评审

    doi:10.1021/cb600261k

    authors: Bliska JB

    更新日期:2006-07-21 00:00:00

  • Pentamycin Biosynthesis in Philippine Streptomyces sp. S816: Cytochrome P450-Catalyzed Installation of the C-14 Hydroxyl Group.

    abstract::Pentamycin is a polyene antibiotic, registered in Switzerland for the treatment of vaginal candidiasis, trichomoniasis, and mixed infections. Chemical instability has hindered its widespread application and development as a drug. Here, we report the identification of Streptomyces sp. S816, isolated from Philippine man...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/acschembio.9b00270

    authors: Zhou S,Song L,Masschelein J,Sumang FAM,Papa IA,Zulaybar TO,Custodio AB,Zabala D,Alcantara EP,de Los Santos ELC,Challis GL

    更新日期:2019-06-21 00:00:00

  • Regioselective hydroxylation of trans-resveratrol via inhibition of tyrosinase from Streptomyces avermitilis MA4680.

    abstract::Secreted tyrosinase from melanin-forming Streptomyces avermitilis MA4680 was involved in both ortho-hydroxylation and further oxidation of trans-resveratrol, leading to the formation of melanin. This finding was confirmed by constructing deletion mutants of melC(2) and melD(2) encoding extracellular and intracellular ...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb300222b

    authors: Lee N,Kim EJ,Kim BG

    更新日期:2012-10-19 00:00:00

  • Peptide-based investigation of the Escherichia coli RNA polymerase σ(70):core interface as target site.

    abstract::The number of bacterial strains that are resistant against antibiotics increased dramatically during the past decades. This fact stresses the urgent need for the development of new antibacterial agents with novel modes of action targeting essential enzymes such as RNA polymerase (RNAP). Bacterial RNAP is a large multi...

    journal_title:ACS chemical biology

    pub_type: 杂志文章

    doi:10.1021/cb3005758

    authors: Hüsecken K,Negri M,Fruth M,Boettcher S,Hartmann RW,Haupenthal J

    更新日期:2013-04-19 00:00:00