BORIS/CTCFL-mediated transcriptional regulation of the hTERT telomerase gene in testicular and ovarian tumor cells.

Abstract:

:Telomerase activity, not detectable in somatic cells but frequently activated during carcinogenesis, confers immortality to tumors. Mechanisms governing expression of the catalytic subunit hTERT, the limiting factor for telomerase activity, still remain unclear. We previously proposed a model in which the binding of the transcription factor CTCF to the two first exons of hTERT results in transcriptional inhibition in normal cells. This inhibition is abrogated, however, by methylation of CTCF binding sites in 85% of tumors. Here, we showed that hTERT was unmethylated in testicular and ovarian tumors and in derivative cell lines. We demonstrated that CTCF and its paralogue, BORIS/CTCFL, were both present in the nucleus of the same cancer cells and bound to the first exon of hTERT in vivo. Moreover, exogenous BORIS expression in normal BORIS-negative cells was sufficient to activate hTERT transcription with an increasing number of cell passages. Thus, expression of BORIS was sufficient to allow hTERT transcription in normal cells and to counteract the inhibitory effect of CTCF in testicular and ovarian tumor cells. These results define an important contribution of BORIS to immortalization during tumorigenesis.

journal_name

Nucleic Acids Res

journal_title

Nucleic acids research

authors

Renaud S,Loukinov D,Alberti L,Vostrov A,Kwon YW,Bosman FT,Lobanenkov V,Benhattar J

doi

10.1093/nar/gkq827

subject

Has Abstract

pub_date

2011-02-01 00:00:00

pages

862-73

issue

3

eissn

0305-1048

issn

1362-4962

pii

gkq827

journal_volume

39

pub_type

杂志文章
  • Transcriptional and post-transcriptional regulation of storage protein gene expression in sulfur-deficient pea seeds.

    abstract::We have used in vitro transcription in isolated pea nuclei to determine whether the expression of genes for the seed storage proteins legumin and vicilin is regulated transcriptionally or post-transcriptionally in response to changing sulfur status in the developing seed. During the first 48 h of recovery from S defic...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/13.3.999

    authors: Beach LR,Spencer D,Randall PJ,Higgins TJ

    更新日期:1985-02-11 00:00:00

  • M.HhaI binds tightly to substrates containing mismatches at the target base.

    abstract::The (cytosine-5) DNA methyltransferase M.HhaI causes its target cytosine base to be flipped completely out of the DNA helix upon binding. We have investigated the effects of replacing the target cytosine by other, mismatched bases, including adenine, guanine, thymine and uracil. We find that M.HhaI binds more tightly ...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/23.8.1388

    authors: Klimasauskas S,Roberts RJ

    更新日期:1995-04-25 00:00:00

  • Structures of apo IRF-3 and IRF-7 DNA binding domains: effect of loop L1 on DNA binding.

    abstract::Interferon regulatory factors IRF-3 and IRF-7 are transcription factors essential in the activation of interferon-β (IFN-β) gene in response to viral infections. Although, both proteins recognize the same consensus IRF binding site AANNGAAA, they have distinct DNA binding preferences for sites in vivo. The X-ray struc...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkr325

    authors: De Ioannes P,Escalante CR,Aggarwal AK

    更新日期:2011-09-01 00:00:00

  • Intrinsic differences between authentic and cryptic 5' splice sites.

    abstract::Cryptic splice sites are used only when use of a natural splice site is disrupted by mutation. To determine the features that distinguish authentic from cryptic 5' splice sites (5'ss), we systematically analyzed a set of 76 cryptic 5'ss derived from 46 human genes. These cryptic 5'ss have a similar frequency distribut...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkg830

    authors: Roca X,Sachidanandam R,Krainer AR

    更新日期:2003-11-01 00:00:00

  • Late induction of human DNA ligase I after UV-C irradiation.

    abstract::We have studied the regulation of DNA ligase I gene expression in UV-C irradiated human primary fibroblasts. An increase of approximately 6-fold both in DNA ligase I messenger and activity levels was observed 24 h after UV treatment, when nucleotide excision repair (NER) is no longer operating. DNA ligase I induction ...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/23.6.962

    authors: Montecucco A,Savini E,Biamonti G,Stefanini M,Focher F,Ciarrocchi G

    更新日期:1995-03-25 00:00:00

  • A SET-domain-independent role of WRAD complex in cell-cycle regulatory function of mixed lineage leukemia.

    abstract::MLL, the trithorax ortholog, is a well-characterized histone 3 lysine 4 methyltransferase that is crucial for proper regulation of the Hox genes during embryonic development. Chromosomal translocations, disrupting the Mll gene, lead to aggressive leukemia with poor prognosis. However, the functions of MLL in cellular ...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gku458

    authors: Ali A,Veeranki SN,Tyagi S

    更新日期:2014-07-01 00:00:00

  • Cell-cycle regulation of non-enzymatic functions of the Drosophila methyltransferase PR-Set7.

    abstract::Tight cell-cycle regulation of the histone H4-K20 methyltransferase PR-Set7 is essential for the maintenance of genome integrity. In mammals, this mainly involves the interaction of PR-Set7 with the replication factor PCNA, which triggers the degradation of the enzyme by the CRL4CDT2 E3 ubiquitin ligase. PR-Set7 is al...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gky034

    authors: Zouaz A,Fernando C,Perez Y,Sardet C,Julien E,Grimaud C

    更新日期:2018-04-06 00:00:00

  • Cell cycle regulated synthesis of an abundant transcript for human chromosomal protein HMG-17.

    abstract::The abundance and cell cycle dependent expression of the mRNA for human nonhistone protein HMG-17 were studied in synchronized HeLa cells. Slot blot analysis indicates that the HMG-17 mRNA is a very abundant message, significantly more so than histone or actin mRNA. RNA prepared from tissue culture cells contains high...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/15.8.3549

    authors: Bustin M,Soares N,Landsman D,Srikantha T,Collins JM

    更新日期:1987-04-24 00:00:00

  • Self-protective responses to norvaline-induced stress in a leucyl-tRNA synthetase editing-deficient yeast strain.

    abstract::The editing function of aminoacyl-tRNA synthetases (aaRSs) is indispensible for formation of the correct aminoacyl-tRNAs. Editing deficiency may lead to growth inhibition and the pathogenesis of various diseases. Herein, we confirmed that norvaline (Nva) but not isoleucine or valine is the major threat to the editing ...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkx487

    authors: Ji QQ,Fang ZP,Ye Q,Chi CW,Wang ED

    更新日期:2017-07-07 00:00:00

  • Novel non-isotopic detection of MutY enzyme-recognized mismatches in DNA via ultrasensitive detection of aldehydes.

    abstract::A highly sensitive method to detect traces of aldehyde-containing apurinic/apyrimidinic (AP) sites in nucleic acids has been developed. Based on this method, a novel approach to detect DNA base mismatches recognized by the mismatch repair glycosylase MutY is demonstrated. Open chain aldehydes generated in nucleic acid...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/27.5.1316

    authors: Maulik G,Botchway S,Chakrabarti S,Tetradis S,Price B,Makrigiorgos GM

    更新日期:1999-03-01 00:00:00

  • The microRNA Registry.

    abstract::The miRNA Registry provides a service for the assignment of miRNA gene names prior to publication. A comprehensive and searchable database of published miRNA sequences is accessible via a web interface (http://www.sanger.ac.uk/Software/Rfam/mirna/), and all sequence and annotation data are freely available for downloa...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkh023

    authors: Griffiths-Jones S

    更新日期:2004-01-01 00:00:00

  • Fluoride-cleavable biotinylation phosphoramidite for 5'-end-labeling and affinity purification of synthetic oligonucleotides.

    abstract::A fluoride-cleavable phosphoramidite for biotinylation was designed, synthesized and coupled efficiently to the 5'-end of DNA on an automatic synthesizer. The diisopropylsilyl acetal functionality was used to link the biotin moiety through a tertiary hydroxide group to the 5'-end of DNA. This linkage proved to be comp...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkg130

    authors: Fang S,Bergstrom DE

    更新日期:2003-01-15 00:00:00

  • A nucleoside kinase as a dual selector for genetic switches and circuits.

    abstract::The development of genetic switches and their integrated forms (genetic circuits) with desired specifications/functions is key for success in synthetic biology. Due to the difficulty in rational design, genetic switches and circuits with desirable specifications are mostly obtained by directed evolution. Based on a vi...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkq1070

    authors: Tashiro Y,Fukutomi H,Terakubo K,Saito K,Umeno D

    更新日期:2011-02-01 00:00:00

  • Histone H3 K79 methylation states play distinct roles in UV-induced sister chromatid exchange and cell cycle checkpoint arrest in Saccharomyces cerevisiae.

    abstract::Histone post-translational modifications have been shown to contribute to DNA damage repair. Prior studies have suggested that specific H3K79 methylation states play distinct roles in the response to UV-induced DNA damage. To evaluate these observations, we examined the effect of altered H3K79 methylation patterns on ...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gku242

    authors: Rossodivita AA,Boudoures AL,Mecoli JP,Steenkiste EM,Karl AL,Vines EM,Cole AM,Ansbro MR,Thompson JS

    更新日期:2014-06-01 00:00:00

  • ATPase activity of the UvrA and UvrAB protein complexes of the Escherichia coli UvrABC endonuclease.

    abstract::We have analyzed the ATPase activity exhibited by the UvrABC DNA repair complex. The UvrA protein is an ATPase whose lack of DNA dependence may be related to the ATP induced monomer-dimer transitions. ATP induced dimerization may be responsible for the enhanced DNA binding activity observed in the presence of ATP. Alt...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/17.11.4145

    authors: Oh EY,Claassen L,Thiagalingam S,Mazur S,Grossman L

    更新日期:1989-06-12 00:00:00

  • Cloning and characterization of a human DEAH-box RNA helicase, a functional homolog of fission yeast Cdc28/Prp8.

    abstract::During the splicing process, spliceosomal snRNAs undergo numerous conformational rearrangements that appear to be catalyzed by proteins belonging to the DEAD/H-box superfamily of RNA helicases. We have cloned a new RNA helicase gene, designated DBP2 (DEAH-boxprotein), homologous to the Schizosaccaromyces pombe cdc28(+...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/26.9.2063

    authors: Imamura O,Saiki K,Tani T,Ohshima Y,Sugawara M,Furuichi Y

    更新日期:1998-05-01 00:00:00

  • The accumulation of MMS-induced single strand breaks in G1 phase is recombinogenic in DNA polymerase beta defective mammalian cells.

    abstract::DNA polymerase (Pol) beta null mouse embryonic fibroblasts provide a useful cell system to investigate the effects of alterations in base excision repair (BER) on genome stability. These cells are characterized by hypersensitivity to the cytotoxic effects of methyl methanesulfonate (MMS) and by decreased repair of the...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gki168

    authors: Pascucci B,Russo MT,Crescenzi M,Bignami M,Dogliotti E

    更新日期:2005-01-12 00:00:00

  • Does the 'non-coding' strand code?

    abstract::The hypothesis that DNA strands complementary to the coding strand contain in phase coding sequences has been investigated. Statistical analysis of the 50 genes of bacteriophage T7 shows no significant correlation between patterns of codon usage on the coding and non-coding strands. In Bacillus and yeast genes the cor...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/13.4.1389

    authors: Sharp PM

    更新日期:1985-02-25 00:00:00

  • The yeast alpha-factor receptor: structural properties deduced from the sequence of the STE2 gene.

    abstract::The STE2 gene of the yeast Saccharomyces cerevisiae encodes a component of the receptor for the oligopeptide pheromone alpha-factor. We have cloned and determined the nucleotide sequence of the STE2 gene. A sequence involved in the control of cell-type expression of the STE2 gene was found 5' of an open reading frame ...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/13.23.8463

    authors: Burkholder AC,Hartwell LH

    更新日期:1985-12-09 00:00:00

  • A versatile toolbox for posttranscriptional chemical labeling and imaging of RNA.

    abstract::Cellular RNA labeling strategies based on bioorthogonal chemical reactions are much less developed in comparison to glycan, protein and DNA due to its inherent instability and lack of effective methods to introduce bioorthogonal reactive functionalities (e.g. azide) into RNA. Here we report the development of a simple...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkv903

    authors: Sawant AA,Tanpure AA,Mukherjee PP,Athavale S,Kelkar A,Galande S,Srivatsan SG

    更新日期:2016-01-29 00:00:00

  • Network of Cancer Genes: a web resource to analyze duplicability, orthology and network properties of cancer genes.

    abstract::The Network of Cancer Genes (NCG) collects and integrates data on 736 human genes that are mutated in various types of cancer. For each gene, NCG provides information on duplicability, orthology, evolutionary appearance and topological properties of the encoded protein in a comprehensive version of the human protein-p...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkp957

    authors: Syed AS,D'Antonio M,Ciccarelli FD

    更新日期:2010-01-01 00:00:00

  • Structural determinants of an internal ribosome entry site that direct translational reading frame selection.

    abstract::The dicistrovirus intergenic internal ribosome entry site (IGR IRES) directly recruits the ribosome and initiates translation using a non-AUG codon. A subset of IGR IRESs initiates translation in either of two overlapping open reading frames (ORFs), resulting in expression of the 0 frame viral structural polyprotein a...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gku622

    authors: Ren Q,Au HH,Wang QS,Lee S,Jan E

    更新日期:2014-08-01 00:00:00

  • The k-junction motif in RNA structure.

    abstract::The k-junction is a structural motif in RNA comprising a three-way helical junction based upon kink turn (k-turn) architecture. A computer program written to examine relative helical orientation identified the three-way junction of the Arabidopsis TPP riboswitch as an elaborated k-turn. The Escherichia coli TPP ribosw...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gku144

    authors: Wang J,Daldrop P,Huang L,Lilley DM

    更新日期:2014-04-01 00:00:00

  • Array-based analysis of genomic DNA methylation patterns of the tumour suppressor gene p16INK4A promoter in colon carcinoma cell lines.

    abstract::Aberrant DNA methylation at CpG dinucleotides can result in epigenetic silencing of tumour suppressor genes and represents one of the earliest events in tumourigenesis. To date, however, high-throughput tools that are capable of surveying the methylation status of multiple gene promoters have been restricted to a limi...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gni072

    authors: Mund C,Beier V,Bewerunge P,Dahms M,Lyko F,Hoheisel JD

    更新日期:2005-04-28 00:00:00

  • The Genome Database for Rosaceae (GDR): year 10 update.

    abstract::The Genome Database for Rosaceae (GDR, http:/www.rosaceae.org), the long-standing central repository and data mining resource for Rosaceae research, has been enhanced with new genomic, genetic and breeding data, and improved functionality. Whole genome sequences of apple, peach and strawberry are available to browse o...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkt1012

    authors: Jung S,Ficklin SP,Lee T,Cheng CH,Blenda A,Zheng P,Yu J,Bombarely A,Cho I,Ru S,Evans K,Peace C,Abbott AG,Mueller LA,Olmstead MA,Main D

    更新日期:2014-01-01 00:00:00

  • Real-time measurement of in vitro transcription.

    abstract::We have developed a simple method to measure RNA synthesis in real time. In this technique, transcription reactions are performed in the presence of molecular beacons that possess a 2'-O-methylribonucleotide backbone. These probes become fluorescent as they hybridize to nascent RNA during the course of synthesis. We f...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gnh068

    authors: Marras SA,Gold B,Kramer FR,Smith I,Tyagi S

    更新日期:2004-05-20 00:00:00

  • Evaluation of 2'-hydroxyl protection in RNA-synthesis using the H-phosphonate approach.

    abstract::A number of different protecting groups were compared with respect to their usefulness for protection of 2'-hydroxyl functions during synthesis of oligoribonucleotides using the H-phosphonate approach. The comparison was between the t-butyldimethylsilyl (t-BDMSi), the o-chlorobenzoyl (o-CIBz), the tetrahydropyranyl (T...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/22.1.94

    authors: Rozners E,Westman E,Strömberg R

    更新日期:1994-01-11 00:00:00

  • Interaction of mRNA with the Escherichia coli ribosome: accessibility of phosphorothioate-containing mRNA bound to ribosomes for iodine cleavage.

    abstract::The contacts of phosphate groups in mRNAs with ribosomes were studied. Two mRNAs were used: one mRNA contained in the middle two defined codons to construct the pre- and the post-translocational states, the other was a sequence around the initiation site of the natural cro-mRNA. Phosphorothioate nucleotides were rando...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/24.12.2228

    authors: Alexeeva EV,Shpanchenko OV,Dontsova OA,Bogdanov AA,Nierhaus KH

    更新日期:1996-06-15 00:00:00

  • Chromatin structure-dependent conformations of the H1 CTD.

    abstract::Linker histones are an integral component of chromatin but how these proteins promote assembly of chromatin fibers and higher order structures and regulate gene expression remains an open question. Using Förster resonance energy transfer (FRET) approaches we find that association of a linker histone with oligonucleoso...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gkw586

    authors: Fang H,Wei S,Lee TH,Hayes JJ

    更新日期:2016-11-02 00:00:00

  • Ancestral Genomes: a resource for reconstructed ancestral genes and genomes across the tree of life.

    abstract::A growing number of whole genome sequencing projects, in combination with development of phylogenetic methods for reconstructing gene evolution, have provided us with a window into genomes that existed millions, and even billions, of years ago. Ancestral Genomes (http://ancestralgenomes.org) is a resource for comprehe...

    journal_title:Nucleic acids research

    pub_type: 杂志文章

    doi:10.1093/nar/gky1009

    authors: Huang X,Albou LP,Mushayahama T,Muruganujan A,Tang H,Thomas PD

    更新日期:2019-01-08 00:00:00