Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections.

Abstract:

:Cardioviruses comprise a genus of picornaviruses that cause severe illnesses in rodents, but little is known about the prevalence, diversity, or spectrum of disease of such agents among humans. A single cardiovirus isolate, Saffold virus, was cultured in 1981 in stool from an infant with fever. Here, we describe the identification of a group of human cardioviruses that have been cloned directly from patient specimens, the first of which was detected using a pan-viral microarray in respiratory secretions from a child with influenza-like illness. Phylogenetic analysis of the nearly complete viral genome (7961 bp) revealed that this virus belongs to the Theiler's murine encephalomyelitis virus (TMEV) subgroup of cardioviruses and is most closely related to Saffold virus. Subsequent screening by RT-PCR of 719 additional respiratory specimens [637 (89%) from patients with acute respiratory illness] and 400 cerebrospinal fluid specimens from patients with neurological disease (aseptic meningitis, encephalitis, and multiple sclerosis) revealed no evidence of cardiovirus infection. However, screening of 751 stool specimens from 498 individuals in a gastroenteritis cohort resulted in the detection of 6 additional cardioviruses (1.2%). Although all 8 human cardioviruses (including Saffold virus) clustered together by phylogenetic analysis, significant sequence diversity was observed in the VP1 gene (66.9%-100% pairwise amino acid identities). These findings suggest that there exists a diverse group of novel human Theiler's murine encephalomyelitis virus-like cardioviruses that hitherto have gone largely undetected, are found primarily in the gastrointestinal tract, can be shed asymptomatically, and have potential links to enteric and extraintestinal disease.

authors

Chiu CY,Greninger AL,Kanada K,Kwok T,Fischer KF,Runckel C,Louie JK,Glaser CA,Yagi S,Schnurr DP,Haggerty TD,Parsonnet J,Ganem D,DeRisi JL

doi

10.1073/pnas.0805968105

subject

Has Abstract

pub_date

2008-09-16 00:00:00

pages

14124-9

issue

37

eissn

0027-8424

issn

1091-6490

pii

0805968105

journal_volume

105

pub_type

杂志文章
  • Genome rhetoric and the emergence of compositional bias.

    abstract::Genomes exhibit diverse patterns of species-specific GC content, GC and AT skews, codon bias, and mutation bias. Despite intensive investigations and the rapid accumulation of sequence data, the causes of these a priori different genome biases have not been agreed on and seem multifactorial and idiosyncratic. We show ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0810122106

    authors: Vetsigian K,Goldenfeld N

    更新日期:2009-01-06 00:00:00

  • CD28 activation pathway regulates the production of multiple T-cell-derived lymphokines/cytokines.

    abstract::CD28 is a 44-kDa glycoprotein expressed as a homodimer on the surface of a major subset of human T cells. Previous studies have demonstrated that the binding of monoclonal antibodies to the CD28 surface antigen can augment the proliferation of purified human T cells stimulated with suboptimal doses of mitogens or anti...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.86.4.1333

    authors: Thompson CB,Lindsten T,Ledbetter JA,Kunkel SL,Young HA,Emerson SG,Leiden JM,June CH

    更新日期:1989-02-01 00:00:00

  • CD28 and CD3 have complementary roles in T-cell traction forces.

    abstract::Mechanical forces have key roles in regulating activation of T cells and coordination of the adaptive immune response. A recent example is the ability of T cells to sense the rigidity of an underlying substrate through the T-cell receptor (TCR) coreceptor CD3 and CD28, a costimulation signal essential for cell activat...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1315606111

    authors: Bashour KT,Gondarenko A,Chen H,Shen K,Liu X,Huse M,Hone JC,Kam LC

    更新日期:2014-02-11 00:00:00

  • Emr, an Escherichia coli locus for multidrug resistance.

    abstract::An Escherichia coli chromosomal DNA fragment cloned on a multicopy plasmid conferred resistance to carbonylcyanide m-chlorophenylhydrazone, nalidixic acid, and a number of other toxic compounds. The sequence of the cloned emr locus located at minute 57.5 of the chromosome revealed two open reading frames, emrA and emr...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.89.19.8938

    authors: Lomovskaya O,Lewis K

    更新日期:1992-10-01 00:00:00

  • Constitutive activity of the tumor necrosis factor promoter is canceled by the 3' untranslated region in nonmacrophage cell lines; a trans-dominant factor overcomes this suppressive effect.

    abstract::The role of the mouse tumor necrosis factor (TNF) promoter, 5' untranslated region (UTR), and 3' UTR in TNF gene expression has been examined in three nonmacrophage cell lines (HeLa, NIH 3T3, and L-929). The TNF promoter is not macrophage-specific. On the contrary, it constitutively drives reporter gene expression in ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.89.2.673

    authors: Kruys V,Kemmer K,Shakhov A,Jongeneel V,Beutler B

    更新日期:1992-01-15 00:00:00

  • Repression of the overproduction of porphyrin precursors in acute intermittent porphyria by intravenous infusions of hematin.

    abstract::In a patient with a severe attack of acute intermittent porphyria, hematin given intravenously caused marked diminution of serum delta-aminolevulinic acid and porphobilinogen. The decline of aminolevulinate was more rapid than that of porphobilinoge. After 2 days of hematin administration, about 5 days were required f...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.68.11.2725

    authors: Bonkowsky HL,Tschudy DP,Collins A,Doherty J,Bossenmaier I,Cardinal R,Watson CJ

    更新日期:1971-11-01 00:00:00

  • Estrogen receptor β regulates AKT activity through up-regulation of INPP4B and inhibits migration of prostate cancer cell line PC-3.

    abstract::Loss of the tumor suppressor, PTEN, is one of the most common findings in prostate cancer (PCa). This loss leads to overactive Akt signaling, which is correlated with increased metastasis and androgen independence. However, another tumor suppressor, inositol-polyphosphate 4-phosphatase type II (INPP4B), can partially ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2007160117

    authors: Chaurasiya S,Wu W,Strom AM,Warner M,Gustafsson JÅ

    更新日期:2020-10-20 00:00:00

  • Kinetics of fiber solidification.

    abstract::Many synthetic or natural fibers are produced via the transformation of a liquid solution into a solid filament, which allows the wet processing of high molecular weight polymers, proteins, or inorganic particles. Synthetic wet-spun fibers are used in our everyday life from clothing to composite reinforcement applicat...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1003302107

    authors: Mercader C,Lucas A,Derré A,Zakri C,Moisan S,Maugey M,Poulin P

    更新日期:2010-10-26 00:00:00

  • DNA from recombinogenic lambda bacteriophages generated by arl mutant of Escherichia coli is cleaved by single-strand-specific endonuclease S1.

    abstract::When propagated on arl strains (a subclass of Escherichia coli hyper-rec mutants), lambda "Red-" duplication phages accumulated an enhanced potential for recombination. The physical properties of the recombinogenic phages thus obtained ("Arl-" phages) were similar to those of phages grown on arl+ bacteria. However, Ar...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章,收录出版

    doi:10.1073/pnas.76.12.6066

    authors: Hays JB,Korba BE

    更新日期:1979-12-01 00:00:00

  • Beyond the Fermi liquid paradigm: hidden Fermi liquids.

    abstract::An intense investigation of possible non-Fermi liquid states of matter has been inspired by two of the most intriguing phenomena discovered in the past quarter century, namely, high-temperature superconductivity and the fractional quantum Hall effect. Despite enormous conceptual strides, these two fields have develope...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0902901106

    authors: Jain JK,Anderson PW

    更新日期:2009-06-09 00:00:00

  • On a notion of simplicial depth.

    abstract::For a distribution F on R(p) and a point x in R(p) the simplicial depth D(x), which is the probability that x be inside a random simplex whose vertices are p + 1 independent observations from F, is introduced. D(x) can be viewed as a measure of depth of the point x relative to F, and its empirical version gives rise t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.85.6.1732

    authors: Liu RY

    更新日期:1988-03-01 00:00:00

  • Synergistic myelopoietic actions in vivo after administration to mice of combinations of purified natural murine colony-stimulating factor 1, recombinant murine interleukin 3, and recombinant murine granulocyte/macrophage colony-stimulating factor.

    abstract::Combinations of low dosages of purified murine hematopoietic colony-stimulating factors (CSFs)--L-cell CSF type 1 (CSF-1), recombinant interleukin 3 (IL-3), and recombinant granulocyte/macrophage CSF (GM-CSF)--were compared with single CSFs for their influence on the cycling rates and numbers of bone marrow granulocyt...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.11.3871

    authors: Broxmeyer HE,Williams DE,Hangoc G,Cooper S,Gillis S,Shadduck RK,Bicknell DC

    更新日期:1987-06-01 00:00:00

  • Linking social norms to efficient conservation investment in payments for ecosystem services.

    abstract::An increasing amount of investment has been devoted to protecting and restoring ecosystem services worldwide. The efficiency of conservation investments, including payments for ecosystem services (PES), has been found to be affected by biological, political, economic, demographic, and social factors, but little is kno...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0809980106

    authors: Chen X,Lupi F,He G,Liu J

    更新日期:2009-07-14 00:00:00

  • Epigenome characterization at single base-pair resolution.

    abstract::We have combined standard micrococcal nuclease (MNase) digestion of nuclei with a modified protocol for constructing paired-end DNA sequencing libraries to map both nucleosomes and subnucleosome-sized particles at single base-pair resolution throughout the budding yeast genome. We found that partially unwrapped nucleo...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1110731108

    authors: Henikoff JG,Belsky JA,Krassovsky K,MacAlpine DM,Henikoff S

    更新日期:2011-11-08 00:00:00

  • Tunicamycin blocks neuritogenesis and glucosamine labeling of gangliosides in developing cerebral neuron cultures.

    abstract::Fetal cerebral neurons at the initiation of active neurite outgrowth in culture incorporate 4-fold more [3H]glucosamine into glycoproteins than into the cellular lipid fraction. After 8 days or longer, when a well-developed fiber network is apparent, lipids are labeled more extensively than the glycoproteins. Labeling...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.81.18.5638

    authors: Yavin E,Richter-Landsberg C,Duksin D,Yavin Z

    更新日期:1984-09-01 00:00:00

  • Reactivation of Epstein-Barr virus by a dual-responsive fluorescent EBNA1-targeting agent with Zn2+-chelating function.

    abstract::Epstein-Barr nuclear antigen 1 (EBNA1) plays a vital role in the maintenance of the viral genome and is the only viral protein expressed in nearly all forms of Epstein-Barr virus (EBV) latency and EBV-associated diseases, including numerous cancer types. To our knowledge, no specific agent against EBV genes or protein...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1915372116

    authors: Jiang L,Lung HL,Huang T,Lan R,Zha S,Chan LS,Thor W,Tsoi TH,Chau HF,Boreström C,Cobb SL,Tsao SW,Bian ZX,Law GL,Wong WT,Tai WC,Chau WY,Du Y,Tang LHX,Chiang AKS,Middeldorp JM,Lo KW,Mak NK,Long NJ,Wong KL

    更新日期:2019-12-10 00:00:00

  • Role of Pam16's degenerate J domain in protein import across the mitochondrial inner membrane.

    abstract::Translocation of proteins across the mitochondrial inner membrane is an essential process requiring an import motor having mitochondrial Hsp70 (mtHsp70) at its core. The J protein partner of mtHsp70, Pam18, is an integral part of this motor, serving to stimulate the ATPase activity of mtHsp70. Pam16, an essential prot...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0505969102

    authors: D'Silva PR,Schilke B,Walter W,Craig EA

    更新日期:2005-08-30 00:00:00

  • Vibrio parahaemolyticus orchestrates a multifaceted host cell infection by induction of autophagy, cell rounding, and then cell lysis.

    abstract::The bacterial pathogen Vibrio parahaemolyticus utilizes a type III secretion system to cause death of host cells within hours of infection. We report that cell death is completely independent of apoptosis and occurs by a mechanism in which injection of multiple type III effectors causes induction of autophagy, cell ro...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0802773105

    authors: Burdette DL,Yarbrough ML,Orvedahl A,Gilpin CJ,Orth K

    更新日期:2008-08-26 00:00:00

  • Analysis of chromosomal instability in human colorectal adenomas with two mutational hits at APC.

    abstract::In vitro data show that the adenomatous polyposis coli (APC) protein associates with the mitotic spindle and that mouse embryonic stem cells with biallelic Apc mutations are karyotypically unstable. These findings led to suggestions that APC acts in chromosomal segregation and that APC inactivation leads to chromosoma...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.012679099

    authors: Sieber OM,Heinimann K,Gorman P,Lamlum H,Crabtree M,Simpson CA,Davies D,Neale K,Hodgson SV,Roylance RR,Phillips RK,Bodmer WF,Tomlinson IP

    更新日期:2002-12-24 00:00:00

  • Transforming potential of a human protooncogene (c-fps/fes) locus.

    abstract::The protooncogene c-fps/fes is a single vertebrate locus homologous to both the fps transforming gene of Fujinami avian sarcoma virus and the fes transforming gene of two feline sarcoma virus isolates. The human c-fps/fes locus has been previously cloned and characterized. We report that a recombinant gene in which 3'...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.81.10.3039

    authors: Sodroski JG,Goh WC,Haseltine WA

    更新日期:1984-05-01 00:00:00

  • Positive supercoiling of DNA greatly diminishes mRNA synthesis in yeast.

    abstract::In Saccharomyces cerevisiae cells harboring a GAL1 promoter-linked beta-galactosidase gene, the simultaneous expression of Escherichia coli DNA topoisomerase I and inactivation of yeast DNA topoisomerases I and II reduces the cellular level of beta-galactosidase to an undetectable level. Analysis of intracellular mRNA...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.89.23.11461

    authors: Gartenberg MR,Wang JC

    更新日期:1992-12-01 00:00:00

  • Hyper innate responses in neonates lead to increased morbidity and mortality after infection.

    abstract::Neonates suffer high morbidity and mortality in infection, presumably because of the lack of a fully developed adaptive and innate immune system. Evidence of poor innate responses in neonates has been shown by using a model that sensitizes the host to Toll-like receptor (TLR)-mediated inflammation with d-galactosamine...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0800152105

    authors: Zhao J,Kim KD,Yang X,Auh S,Fu YX,Tang H

    更新日期:2008-05-27 00:00:00

  • Selective recognition of nucleic acids by proteins: the specificity of guanine interaction with carboxylate ions.

    abstract::The interaction of carboxylate ions (acetate, butyrate) with nucleic aicd bases and nucleosides has been investigated by proton magnetic resonance in dimethyl sulfoxide (d6)/H2O mixtures. Carboxylate ions interacted only with guanine derivatives and led to a large downfield shift of the NH2 resonance. A 1:1 stoichiome...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.74.11.4872

    authors: Lancelot G,Hélène C

    更新日期:1977-11-01 00:00:00

  • Differences in spatial versus temporal reaction norms for spring and autumn phenological events.

    abstract::For species to stay temporally tuned to their environment, they use cues such as the accumulation of degree-days. The relationships between the timing of a phenological event in a population and its environmental cue can be described by a population-level reaction norm. Variation in reaction norms along environmental ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2002713117

    authors: Delgado MDM,Roslin T,Tikhonov G,Meyke E,Lo C,Gurarie E,Abadonova M,Abduraimov O,Adrianova O,Akimova T,Akkiev M,Ananin A,Andreeva E,Andriychuk N,Antipin M,Arzamascev K,Babina S,Babushkin M,Bakin O,Barabancova A,Bas

    更新日期:2020-12-08 00:00:00

  • Rab11a and myosin Vb are required for bile canalicular formation in WIF-B9 cells.

    abstract::Hepatocytes polarize by forming functionally distinct sinusoidal (basolateral) and canalicular (apical) plasma membrane domains. Two distinct routes are used for delivery of membrane proteins to the canaliculus. Proteins having glycosylphosphatidylinositol anchors or single transmembrane domains are targeted to the si...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0503702102

    authors: Wakabayashi Y,Dutt P,Lippincott-Schwartz J,Arias IM

    更新日期:2005-10-18 00:00:00

  • Identification of a binding site in the disintegrin domain of fertilin required for sperm-egg fusion.

    abstract::Fertilization and certain later stages in mammalian embryonic development require fusion between membranes of individual cells. The mechanism of eukaryotic cell-cell fusion is unknown, and no surface molecules required for this process have been unequivocally identified. The role of the sperm surface protein fertilin ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.91.10.4195

    authors: Myles DG,Kimmel LH,Blobel CP,White JM,Primakoff P

    更新日期:1994-05-10 00:00:00

  • Decision versus compromise for animal groups in motion.

    abstract::Previously, we showed using a computational agent-based model that a group of animals moving together can make a collective decision on direction of motion, even if there is a conflict between the directional preferences of two small subgroups of "informed" individuals and the remaining "uninformed" individuals have n...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1118318108

    authors: Leonard NE,Shen T,Nabet B,Scardovi L,Couzin ID,Levin SA

    更新日期:2012-01-03 00:00:00

  • Dynamic motility selection drives population segregation in a bacterial swarm.

    abstract::Population expansion in space, or range expansion, is widespread in nature and in clinical settings. Space competition among heterogeneous subpopulations during range expansion is essential to population ecology, and it may involve the interplay of multiple factors, primarily growth and motility of individuals. Struct...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1917789117

    authors: Zuo W,Wu Y

    更新日期:2020-03-03 00:00:00

  • Increased water deficit decreases Douglas fir growth throughout western US forests.

    abstract::Changes in tree growth rates can affect tree mortality and forest feedbacks to the global carbon cycle. As air temperature increases, evaporative demand also increases, increasing effective drought in forest ecosystems. Using a spatially comprehensive network of Douglas fir (Pseudotsuga menziesii) chronologies from 12...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1602384113

    authors: Restaino CM,Peterson DL,Littell J

    更新日期:2016-08-23 00:00:00

  • Multiple benefits of multiple mating in guppies.

    abstract::The rewards of promiscuity for males are undisputed. But why should a female mate promiscuously, particularly when her partners offer no resources other than sperm and increase her chances of succumbing to predation or disease? This question has been hotly debated but at present remains largely unresolved [Jennions, M...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.180207297

    authors: Evans JP,Magurran AE

    更新日期:2000-08-29 00:00:00