Online multidimensional separation with biphasic monolithic capillary column for shotgun proteome analysis.

Abstract:

:A biphasic monolithic capillary column with 10 cm segment of strong-cation exchange monolith and 65 cm segment of reversed-phase monolith was prepared within a single 100 microm i.d. capillary. Separation performance of this column was evaluated by a five-cycle online multidimensional separation of 10 microg tryptic digest of yeast proteins using nanoflow liquid chromatography coupled with tandem mass spectrometry, and it took 12 h for whole separation under the operating pressure only approximately 900 psi. Totally, 780 distinct proteins were positively identified through assignment of 2953 unique peptides at false-positive rate less than 1%. The good separation performance of this biphasic column was largely attributed to the good orthogonality of the strong-cation exchange monolith and reversed-phase monolith for multidimensional separation.

journal_name

J Proteome Res

authors

Wang F,Dong J,Ye M,Jiang X,Wu R,Zou H

doi

10.1021/pr700562b

subject

Has Abstract

pub_date

2008-01-01 00:00:00

pages

306-10

issue

1

eissn

1535-3893

issn

1535-3907

journal_volume

7

pub_type

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