Improving model robustness with bootstrapping -- application to optimal discriminant analysis for ordinal responses (ODAO).

Abstract:

OBJECTIVE:Recent results published by Coste et al. in discriminant analysis with ordinal responses showed the superiority of optimal discriminating analysis for ordinal responses (ODAO) both in terms of classification and simplicity of implementation compared to classic methods (Fisher's discrimination, logistic regression) applied to medical data (prognostics of burns) and to simulated data. Nevertheless, the solutions obtained by ODAO may be sensitive to re-sampling (i.e the estimated coefficients by ODAO may show excessive sensitivity to the training sample). This study proposes some solutions to control the fluctuations of sampling and to ensure model stability. METHODS:We used intensive computational methods and bootstrapping, at the outset of model building in order to reduce the sampling variability of estimated coefficients. Thus, the estimation of the coefficients was not based on the minimization of a classification criterion of the training sample, but on the minimization of an aggregate criterion of bootstrapped replications of a classification criterion. Five aggregate criteria were studied. RESULTS:The improvement in terms of robustness appeared in 30% of the test cases with moderate training sample size and 55% of those with small training sample size. CONCLUSION:Simulated test cases showed that bootstrapping can help construct more robust models in difficult classification situations and small training samples which are particularly frequent.

journal_name

Methods Inf Med

authors

Le Teuff G,Quantin C,Venot A,Walter E,Coste J

keywords:

subject

Has Abstract

pub_date

2005-01-01 00:00:00

pages

704-11

issue

5

eissn

0026-1270

issn

2511-705X

pii

05050704

journal_volume

44

pub_type

杂志文章
  • Uncertainty and decisions in medical informatics.

    abstract::This paper presents a tutorial introduction to the handling of uncertainty and decision-making in medical reasoning systems. It focuses on the central role of uncertainty in all of medicine and identifies the major themes that arise in research papers. It then reviews simple Bayesian formulations of the problem and pu...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Szolovits P

    更新日期:1995-03-01 00:00:00

  • More up-to-date monitoring of long-term survival rates by cancer registries: an empirical example.

    abstract::A few years ago, a new method of survival analysis, denoted period analysis, has been developed to derive more up-to-date estimates of long-term survival rates of cancer patients, but this method has rarely been applied so far. Using empirical examples from the Saarland Cancer Registry, we illustrate how seriously tra...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Brenner H,Gefeller O,Stegmaier C,Ziegler H

    更新日期:2001-07-01 00:00:00

  • Development of ICF code selection tools for mental health care.

    abstract:BACKGROUND:The International Classification of Functioning, Disability and Health (ICF) has been available as a means of coding life functions but the coding process is cumbersome due to the large number of ICF codes. In the current study, we developed ICF code selection tools to support the coding of activity and part...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:10.3414/ME10-01-0062

    authors: Manabe S,Miura Y,Takemura T,Ashida N,Nakagawa R,Mineno T,Matsumura Y

    更新日期:2011-01-01 00:00:00

  • Cortical potential imaging of brain electrical activity by means of parametric projection filter.

    abstract:OBJECTIVES:The objective of this study was to explore suitable spatial filters for inverse estimation of cortical potentials from the scalp electroencephalogram. The effect of incorporating noise covariance into inverse procedures was examined by computer simulations and tested in human experiment. METHODS:The paramet...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Hori J,Lian J,He B

    更新日期:2004-01-01 00:00:00

  • Validating the knowledge base of a therapy planning system.

    abstract::Validation of expert system knowledge bases has proved to be difficult. This paper presents a description of a system called ScriptGen that generates test data for validating the knowledge base of the ONCOCIN cancer therapy planning system. Because of the size and complexity of the ONCOCIN knowledge base, we require t...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Shwe MA,Tu SW,Fagan LM

    更新日期:1989-01-01 00:00:00

  • Cognitive tools in medical teamwork: the spatial arrangement of patient records.

    abstract:OBJECTIVES:As a preliminary for the design of Computer-Based Patient Records, the aim of this paper is to build an understanding of the roles physical artifacts like paper-based patient records play in supporting cognition and collaboration in the health-care settings. METHOD:A small ethnographically-informed study wa...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Bång M,Timpka T

    更新日期:2003-01-01 00:00:00

  • Reconstructing bifurcation diagrams of dynamical systems using measured time series.

    abstract::We present an algorithm for reconstructing the bifurcation structure of a dynamical system from time series. The method consists in finding a parameterized predictor function whose bifurcation structure is similar to that of the given system. Nonlinear autoregressive (NAR) models with polynomial terms are employed as ...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Bagarinao E,Pakdaman K,Nomura T,Sato S

    更新日期:2000-06-01 00:00:00

  • Evaluation of the impact of a CPOE system on nurse-physician communication--a mixed method study.

    abstract:OBJECTIVES:To assess the impact of a CPOE system on medication-related communication of nurses and physicians. METHODS:In six internal medicine wards of an academic medical center, two questionnaires were used to evaluate nurses' attitudes toward the impact of a paper-based medication system and then a CPOE system on ...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:10.3414/ME0572

    authors: Pirnejad H,Niazkhani Z,van der Sijs H,Berg M,Bal R

    更新日期:2009-01-01 00:00:00

  • Computer-assisted elaboration of job histories.

    abstract::Three ways are proposed to help the occupational physician in constructing a worker's job history or Curriculum Laboris (CL) with a PC. The quality and, therefore, the usefulness of any job history is greatly conditioned by the method and quality of data collection. The Curriculum Laboris method explained in a previou...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Martin JM,Mouaddib A,Robaux P

    更新日期:1990-03-01 00:00:00

  • Evaluating the impact of hybrid electronic-paper environments upon novice nurse information seeking.

    abstract:OBJECTIVE:The purpose of this study was to investigate the effects of hybrid environments (i.e. where part of the patient record is paper-based and part of it is electronic) upon aspects of novice nurse information seeking (i.e. amount of information accessed, choice of key information sources, type of information and ...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:10.3414/ME9222

    authors: Borycki EM,Lemieux-Charles L,Nagle L,Eysenbach G

    更新日期:2009-01-01 00:00:00

  • Evolution of artificial neural network architecture: prediction of depression after mania.

    abstract::Artificial neural networks (ANNs) are compared to standard statistical methods for outcome prediction in biomedical problems. A general method for using genetic algorithms to "evolve" ANN architecture (EANN) is presented. Accuracy of logistic regression, a fully interconnected ANN, and an EANN for predicting depressio...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Jefferson MF,Pendleton N,Lucas CP,Lucas SB,Horan MA

    更新日期:1998-09-01 00:00:00

  • Medicine in the 21st century: global problems, global solutions.

    abstract:OBJECTIVES:To discuss application areas of information technology in medicine and health care on the occasion of the opening of the Private Universität für Medizinische Informatik und Technik Tirol/University for Health Informatics and Technology Tyrol (UMIT) at Innsbruck, Tyrol, Austria. RESULTS AND CONCLUSIONS:Impor...

    journal_title:Methods of information in medicine

    pub_type:

    doi:

    authors: Lindberg DA

    更新日期:2002-01-01 00:00:00

  • Towards health for all: WHO and IMIA intensify collaboration. Joint Communiqué during Medinfo 2007 in Brisbane.

    abstract:OBJECTIVE:To intensify the collaboration between WHO, the World Health Organization, and IMIA, the International Medical Informatics Association. METHODS:Identifying key areas of collaboration and publishing a joint communiqué during Medinfo 2007 in Brisbane, Australia. RESULTS AND CONCLUSIONS:WHO and IMIA have ident...

    journal_title:Methods of information in medicine

    pub_type: 社论

    doi:10.1160/me5006

    authors: Geissbuhler A,Haux R,Kwankam SY

    更新日期:2007-01-01 00:00:00

  • On a hybrid method in dose finding studies.

    abstract:OBJECTIVES:Combination of multiple testing and modeling techniques in dose-response studies. Use of hypotheses tests to assess the significance of the dose-response signal associated with a given candidate dose-response model. Estimation of target dose(s) following the previous model selection step. Illustration of the...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Bretz F,Pinheiro JC,Branson M

    更新日期:2004-01-01 00:00:00

  • Prognosis of body fluid level by fuzzy logic technique.

    abstract::Surgical fluid replacement is a critical issue in medicine as the fluid volume excess or deficit can both complicate the patient's condition. Currently, the administration of fluid volume is carried out primarily based on the experience and expertise of the anaesthetist as there is no analytical method available to es...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Chan W,Naghdy F

    更新日期:2001-03-01 00:00:00

  • Developmental toxicity risk assessment: a rough sets approach.

    abstract::A rough-sets approach was applied to a data set consisting of animal study results and other compound characteristics to generate local and global (certain/possible) sets of rules for prediction of developmental toxicity in human subjects. A modified version of the rough-sets approach is proposed to allow the construc...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Hashemi RR,Jelovsek FR,Razzaghi M

    更新日期:1993-02-01 00:00:00

  • Presenting XML-based medical discharge letters according to CDA.

    abstract:UNLABELLED:The HL7 Clinical Document Architecture (CDA) is an important XML-based standard for the representation of clinical documents. OBJECTIVES:The use of Markup Languages could satisfy the demands of involved healthcare staff as well as the needs of patients, to receive an overview of the patient's treatment duri...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Bludau HB,Wolff A,Hochlehnert AJ

    更新日期:2003-01-01 00:00:00

  • Cost-effective GPU-grid for genome-wide epistasis calculations.

    abstract:BACKGROUND:Until recently, genotype studies were limited to the investigation of single SNP effects due to the computational burden incurred when studying pairwise interactions of SNPs. However, some genetic effects as simple as coloring (in plants and animals) cannot be ascribed to a single locus but only understood w...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:10.3414/ME11-02-0049

    authors: Pütz B,Kam-Thong T,Karbalai N,Altmann A,Müller-Myhsok B

    更新日期:2013-01-01 00:00:00

  • Harmonization of detailed clinical models with clinical study data standards.

    abstract:INTRODUCTION:This article is part of the Focus Theme of METHODS of Information in Medicine on "Managing Interoperability and Complexity in Health Systems". BACKGROUND:Data sharing and integration between the clinical research data management system and the electronic health record system remains a challenging issue. T...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:10.3414/ME13-02-0019

    authors: Jiang G,Evans J,Oniki TA,Coyle JF,Bain L,Huff SM,Kush RD,Chute CG

    更新日期:2015-01-01 00:00:00

  • Determining the effects of patient casemix on length of hospital stay: a proportional hazards frailty model approach.

    abstract:OBJECTIVES:To identify factors associated with hospital length of stay (LOS) and to model variations in LOS within Diagnosis Related Groups (DRGs). METHODS:A proportional hazards frailty modelling approach is proposed that accounts for patient transfers and the inherent correlation of patients clustered within hospita...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Lee AH,Yau KK

    更新日期:2001-01-01 00:00:00

  • A pictorial schema for a comprehensive user-oriented identification of medical Apps.

    abstract:OBJECTIVES:The huge amount of released medical apps prevents medical app users from believing that medical scientific societies and other accreditation bodies as well, have the resources and the power for assigning to any medical app a quality score. By the time being, any medical app user has to take the risks related...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:10.3414/ME13-01-0093

    authors: Bonacina S,Marceglia S,Pinciroli F

    更新日期:2014-01-01 00:00:00

  • The distinction between linguistic and conceptual semantics in medical terminology and its implication for NLP-based knowledge acquisition.

    abstract::Natural language understanding systems have to exploit various kinds of knowledge in order to represent the meaning behind texts. Getting this knowledge in place is often such a huge enterprise that it is tempting to look for systems that can discover such knowledge automatically. We describe how the distinction betwe...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Ceusters W,Buekens F,De Moor G,Waagmeester A

    更新日期:1998-11-01 00:00:00

  • A Generic Data Harmonization Process for Cross-linked Research and Network Interaction. Construction and Application for the Lung Cancer Phenotype Database of the German Center for Lung Research.

    abstract:OBJECTIVE:Joint data analysis is a key requirement in medical research networks. Data are available in heterogeneous formats at each network partner and their harmonization is often rather complex. The objective of our paper is to provide a generic approach for the harmonization process in research networks. We applied...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:10.3414/ME14-02-0030

    authors: Firnkorn D,Ganzinger M,Muley T,Thomas M,Knaup P

    更新日期:2015-01-01 00:00:00

  • Health information science at UVic: the student perspective.

    abstract::The graduates and students of the School of Health Information Science (HIS) at the University of Victoria (UVic) have pioneered the Canadian sphere in health informatics since 1982. After six years of growth this co-operative education program has matured and establishment of a research base and graduate school has b...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Anglin CR

    更新日期:1989-11-01 00:00:00

  • Inter-observer variation in decision-making regarding patients on chronic hemodialysis: a study using the kappa index.

    abstract::To examine inter-observer variation in the monitoring of patients with chronic disease, four nephrologists independently assessed 62 patients on maintenance hemodialysis. Deviation from normal was determined for adequacy of dialysis, protein intake, and metabolic state. The kappa-index, which allows to adjust for chan...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Timpka T,Buur T

    更新日期:1990-03-01 00:00:00

  • PDA usage by Japanese resident physicians is low: a cross-sectional survey.

    abstract:OBJECTIVES:Personal digital assistants (PDAs) are in widespread use by resident physicians in many countries, reaching as high as 95% in some reports. Uses are varied and include clinical decision support and support of evidence-based practice. Utilization by resident doctors in Japan has not been characterized. This s...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:10.3414/ME0607

    authors: Jacobs JL,Takahashi O,Ohde S,Tokuda Y,Omata F,Fukui T

    更新日期:2009-01-01 00:00:00

  • A survey on visual information search behavior and requirements of radiologists.

    abstract:OBJECTIVES:The main objective of this study is to learn more on the image use and search requirements of radiologists. These requirements will then be taken into account to develop a new search system for images and associated meta data search in the Khresmoi project. METHODS:Observations of the radiology workflow, ca...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:10.3414/ME11-02-0025

    authors: Markonis D,Holzer M,Dungs S,Vargas A,Langs G,Kriewel S,Müller H

    更新日期:2012-01-01 00:00:00

  • A compartmental model for simulation of IGF-I kinetics and metabolism.

    abstract::A compartmental model for the simulation of in-vivo insulin-like growth factor one (IGF-I) kinetics and metabolism is presented. The model is based on the concept that IGF binding proteins (IGFBPs) act as a reservoir for IGF-I in plasma, thereby restricting its access to the extravascular space. The model is divided i...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Boroujerdi MA,Sonksen PH,Jones RH

    更新日期:1994-12-01 00:00:00

  • An intelligent Computer-Assisted Instruction system for clinical case teaching.

    abstract::The use of computers in the field of medical education is common. Our purpose is to present a Computer-Assisted Instruction system which has been developed over ten years at the University of Compiègne and the University of Rennes Medical School. This system can be used to help the student to solve clinical cases by a...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Fontaine D,Le Beux P,Riou C,Jacquelinet C

    更新日期:1994-10-01 00:00:00

  • Observations on health information in developing countries.

    abstract::Based on personal experiences, observations are offered on health information in developing countries, ways in which information systems can be strengthened, and opportunities for health-information science graduates. Although data collection consumes a significant portion of the health worker's day, information syste...

    journal_title:Methods of information in medicine

    pub_type: 杂志文章

    doi:

    authors: Hull C

    更新日期:1994-06-01 00:00:00