MotifPrototyper: a Bayesian profile model for motif families.

abstract：:The attachment of chondrocytes to collagen substrates is stimulated by serum but not by fibronectin. The active material in serum was partially purified and was shown to be a protein by its sensitivity to trypsin and heat and its chromatographic properties. This factor, which we have named chondronectin, is distinct f...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hewitt AT,Kleinman HK,Pennypacker JP,Martin GR

更新日期：1980-01-01 00:00:00

abstract：:This study challenges the paradigm that salt marsh plants prevent lateral wave-induced erosion along wetland edges by binding soil with live roots and clarifies the role of vegetation in protecting the coast. In both laboratory flume studies and controlled field experiments, we show that common salt marsh plants do no...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Feagin RA,Lozada-Bernard SM,Ravens TM,Möller I,Yeager KM,Baird AH

更新日期：2009-06-23 00:00:00

abstract：:In the retina, dopamine plays a central role in neural adaptation to light. Progress in the study of dopaminergic amacrine (DA) cells has been limited because they are very few (450 in each mouse retina, 0.005% of retinal neurons). Here, we applied transgenic technology, single-cell global mRNA amplification, and cDNA...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Gustincich S,Contini M,Gariboldi M,Puopolo M,Kadota K,Bono H,LeMieux J,Walsh P,Carninci P,Hayashizaki Y,Okazaki Y,Raviola E

更新日期：2004-04-06 00:00:00

abstract：:The catalytic cycle of the ATP/Mg(2+)-dependent enzyme beta-lactam synthetase (beta-LS) from Streptomyces clavuligerus has been observed through a series of x-ray crystallographic snapshots. Chemistry is initiated by the ordered binding of ATP/Mg(2+) and N(2)-(carboxyethyl)-l-arginine (CEA) to the apoenzyme. The apo a...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Miller MT,Bachmann BO,Townsend CA,Rosenzweig AC

更新日期：2002-11-12 00:00:00

abstract：:In target tissue extracts, heat shock protein hsp90 has been found associated to all unliganded steroid receptors. Modulation of important functions of these receptors, including prevention of DNA binding and optimization of transcriptional activity, has been attributed to hsp90. However no unequivocal in vivo demonst...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kang KI,Devin J,Cadepond F,Jibard N,Guiochon-Mantel A,Baulieu EE,Catelli MG

更新日期：1994-01-04 00:00:00

abstract：:Prions are thought to replicate in an autocatalytic process that converts cellular prion protein (PrP(C)) to the disease-associated misfolded PrP isoform (PrP(Sc)). Our study scrutinizes this hypothesis by in vitro protein misfolding cyclic amplification (PMCA). In serial transmission PMCA experiments, PrP(Sc) was ino...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Bieschke J,Weber P,Sarafoff N,Beekes M,Giese A,Kretzschmar H

更新日期：2004-08-17 00:00:00

abstract：:The dnaZX gene of Escherichia coli directs the synthesis of two proteins, DnaZ and DnaX. These products are confirmed as the gamma and tau subunits of DNA polymerase III because antibody to a synthetic peptide present in both the DnaZ and DnaX proteins reacts also with the gamma and tau subunits of holoenzyme. To char...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lee SH,Walker JR

更新日期：1987-05-01 00:00:00

abstract：:Various compounds that affect signal transduction regulate the relative utilization of alternative processing pathways for the beta-amyloid precursor protein (beta APP) in intact cells, increasing the production of nonamyloidogenic soluble beta APP (s beta APP) and decreasing that of amyloidogenic beta-amyloid peptide...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Xu H,Sweeney D,Greengard P,Gandy S

更新日期：1996-04-30 00:00:00

abstract：:In the majority of human tumors, expression of the c-MYC oncogene becomes constitutive. Here, we report that c-MYC directly regulates the expression of AP4 via CACGTG motifs in the first intron of the AP4 gene. Induction of AP4 was required for c-MYC-mediated cell cycle reentry of anti-estrogen arrested breast cancer ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Jung P,Menssen A,Mayr D,Hermeking H

更新日期：2008-09-30 00:00:00

abstract：:Across the Upper Missouri River Basin, the recent drought of 2000 to 2010, known as the "turn-of-the-century drought," was likely more severe than any in the instrumental record including the Dust Bowl drought. However, until now, adequate proxy records needed to better understand this event with regard to long-term v...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Martin JT,Pederson GT,Woodhouse CA,Cook ER,McCabe GJ,Anchukaitis KJ,Wise EK,Erger PJ,Dolan L,McGuire M,Gangopadhyay S,Chase KJ,Littell JS,Gray ST,St George S,Friedman JM,Sauchyn DJ,St-Jacques JM,King J

更新日期：2020-05-26 00:00:00

abstract：:Competition for mates can be a major source of selection, not just on secondary sexual traits but across the genome. Mate competition strengthens selection on males via sexual selection, which typically favors healthy, vigorous individuals and, thus, all genetic variants that increase overall quality. However, recent ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Yun L,Chen PJ,Kwok KE,Angell CS,Rundle HD,Agrawal AF

更新日期：2018-06-26 00:00:00

abstract：:Genes that are unexpressed in somatic cells have been activated by injecting cultured cell nuclei of the frog Xenopus laevis into oocytes of the newt Pleurodeles waltlii. The genes that were activated are normally expressed in oocytes but not in cultured cells. Conversely, genes that are normally expressed in cultured...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： De Robertis EM,Gurdon JB

更新日期：1977-06-01 00:00:00

abstract：:The candidate phylum TM7 is globally distributed and often associated with human inflammatory mucosal diseases. Despite its prevalence, the TM7 phylum remains recalcitrant to cultivation, making it one of the most enigmatic phyla known. In this study, we cultivated a TM7 phylotype (TM7x) from the human oral cavity. Th...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： He X,McLean JS,Edlund A,Yooseph S,Hall AP,Liu SY,Dorrestein PC,Esquenazi E,Hunter RC,Cheng G,Nelson KE,Lux R,Shi W

更新日期：2015-01-06 00:00:00

abstract：:In a primitive chordate model of natural chimerism, one chimeric partner is often eliminated in a process of allogeneic resorption. Here, we identify the cellular framework underlying loss of tolerance to one partner within a natural Botryllus schlosseri chimera. We show that the principal cell type mediating chimeric...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Corey DM,Rosental B,Kowarsky M,Sinha R,Ishizuka KJ,Palmeri KJ,Quake SR,Voskoboynik A,Weissman IL

更新日期：2016-06-07 00:00:00

abstract：:New data are reported on the influence of size on the velocity threshold for real movement. As the length of a narrow stimulus object increases, width remaining constant, the velocity threshold also increases. These findings are discussed in relation to some psychophysical experiments on contrast and some physiologica...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mates B,Graham CH

更新日期：1970-03-01 00:00:00

abstract：:Fanconi anemia (FA) is caused by defects in cellular responses to DNA crosslinking damage and replication stress. Given the constant occurrence of endogenous DNA damage and replication fork stress, it is unclear why complete deletion of FA genes does not have a major impact on cell proliferation and germ-line FA patie...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Wang R,Lenoir WF,Wang C,Su D,McLaughlin M,Hu Q,Shen X,Tian Y,Klages-Mundt N,Lynn E,Wood RD,Chen J,Hart T,Li L

更新日期：2020-12-29 00:00:00

abstract：:We describe a strategy to "revive" putatively pathogenic T cells from frozen specimens of human inflammatory target organs. To distinguish pathogenic from irrelevant bystander T cells, we focused on cells that were (i) clonally expanded and (ii) in direct morphological contact with a target cell. Using CDR3 spectratyp...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Seitz S,Schneider CK,Malotka J,Nong X,Engel AG,Wekerle H,Hohlfeld R,Dornmair K

更新日期：2006-08-08 00:00:00

abstract：:Treatment of quiescent cultures of mouse embryo-derived AKR-2B cells with transforming growth factor beta resulted in an early induction of c-sis mRNA. The increase in c-sis mRNA was followed by a corresponding increase in protein similar to platelet-derived growth factor (PDGF) in the culture medium. In addition, PDG...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Leof EB,Proper JA,Goustin AS,Shipley GD,DiCorleto PE,Moses HL

更新日期：1986-04-01 00:00:00

abstract：:Phosphorylation of the cystic fibrosis transmembrane conductance regulator (CFTR) by cAMP-dependent protein kinase leads to chloride flux in epithelial cells. Is CFTR also required for the calcium-dependent activation of chloride channels? We used antisense oligodeoxynucleotides to CFTR to reduce the expression of CFT...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Wagner JA,McDonald TV,Nghiem PT,Lowe AW,Schulman H,Gruenert DC,Stryer L,Gardner P

更新日期：1992-08-01 00:00:00

abstract：:Scleroderma is a chronic systemic disease that leads to fibrosis of affected organs. Transforming growth factor (TGF) beta has been implicated in the pathogenesis of scleroderma. Smad proteins are signaling transducers downstream from TGF-beta receptors. Three families of Smads have been identified: (i) receptor-regul...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Dong C,Zhu S,Wang T,Yoon W,Li Z,Alvarez RJ,ten Dijke P,White B,Wigley FM,Goldschmidt-Clermont PJ

更新日期：2002-03-19 00:00:00

abstract：:In adult mammalian brain, occurrence of the synthesis of estradiol from endogenous cholesterol has been doubted because of the inability to detect dehydroepiandrosterone synthase, P45017alpha. In adult male rat hippocampal formation, significant localization was demonstrated for both cytochromes P45017alpha and P450 a...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hojo Y,Hattori TA,Enami T,Furukawa A,Suzuki K,Ishii HT,Mukai H,Morrison JH,Janssen WG,Kominami S,Harada N,Kimoto T,Kawato S

更新日期：2004-01-20 00:00:00

abstract：:The stimulatory activity of peptides from the alpha 1 domain of the major histocompatibility complex (MHC) class I antigen on adipose cell glucose transport was previously shown to require a preformed, ordered conformation of the peptide. The two peptides studied previously were Dk-(61-85) (ERETQIAKGNEQSFRVDLRTLLRYY) ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Stagsted J,Mapelli C,Meyers C,Matthews BW,Anfinsen CB,Goldstein A,Olsson L

更新日期：1993-08-15 00:00:00

abstract：:DNA toroids produced by the condensation of lambda phage DNA with hexammine cobalt (III) have been investigated by cryoelectron microscopy. Image resolution obtained by this technique has allowed unprecedented views of DNA packing within toroidal condensates. Toroids oriented coplanar with the microscope image plane e...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hud NV,Downing KH

更新日期：2001-12-18 00:00:00

abstract：:Zea mays plasma membrane intrinsic proteins (ZmPIPs) fall into two groups, ZmPIP1s and ZmPIP2s, that exhibit different water channel activities when expressed in Xenopus oocytes. ZmPIP1s are inactive, whereas ZmPIP2s induce a marked increase in the membrane osmotic water permeability coefficient, P(f). We previously s...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Zelazny E,Borst JW,Muylaert M,Batoko H,Hemminga MA,Chaumont F

更新日期：2007-07-24 00:00:00

abstract：:Song syntax, defined as orderly temporal arrangements of acoustic units within a bird song, is a conspicuous feature of the songs of many species of passerine birds. While syntactical features play a role in interspecific song recognition by males of many bird species, syntax variation within species and female respon...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Balaban E

更新日期：1988-05-01 00:00:00

abstract：:Protein misfolding and the formation of aggregates are increasingly recognized components of the pathology of human genetic disease and hallmarks of many neurodegenerative disorders. As exemplified by polyglutamine diseases, the propensity for protein misfolding is associated with the length of polyglutamine expansion...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Nollen EA,Garcia SM,van Haaften G,Kim S,Chavez A,Morimoto RI,Plasterk RH

更新日期：2004-04-27 00:00:00

abstract：:By employing the nuclear DNA of the African rice Oryza glaberrima as a reference genome, the timing, natures, mechanisms, and specificities of recent sequence evolution in the indica and japonica subspecies of Oryza sativa were identified. The data indicate that the genome sizes of both indica and japonica have increa...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ma J,Bennetzen JL

更新日期：2004-08-24 00:00:00

abstract：:UDP-xylose is a sugar donor required for the synthesis of diverse and important glycan structures in animals, plants, fungi, and bacteria. Xylose-containing glycans are particularly abundant in plants and in the polysaccharide capsule that is the major virulence factor of the pathogenic fungus Cryptococcus neoformans....

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Bar-Peled M,Griffith CL,Doering TL

更新日期：2001-10-09 00:00:00

abstract：:The ability of the isolated perfused rat liver to differentiate between chylomicrons and remnants with either high or low apoprotein E:C ratios was investigated. Remnants were prepared in hepatectomized rats injected with chylomicrons double-labeled with [3H]cholesterol and 14C-labeled fatty acids. By densitometric sc...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Borensztajn J,Kotlar TJ

更新日期：1984-09-01 00:00:00

abstract：:The dendritic building blocks with a focal pyrene unit self-organize into vesicles in aqueous phase. The in situ inclusion of the focal pyrene units into the cavity of beta- or gamma-cyclodextrin (CD) induces self-assembled organic nanotubes with an average outer diameter of approximately 45 nm and inner diameter of 2...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Park C,Lee IH,Lee S,Song Y,Rhue M,Kim C

更新日期：2006-01-31 00:00:00