Mitochondrial DNA polymorphisms as risk factors for Parkinson's disease and Parkinson's disease dementia.

Abstract:

:The activity of complex I of the mitochondrial respiratory chain has been found to be decreased in patients with Parkinson's disease (PD), but no mutations have been identified in genes encoding complex I subunits. Recent studies have suggested that polymorphisms in mitochondrial DNA (mtDNA)-encoded complex I genes (MTND) modify susceptibility to PD. We hypothesize that the risk of PD is conveyed by the total number of nonsynonymous substitutions in the MTND genes in various mtDNA lineages rather than by single mutations. To test this possibility, we determined the number of nonsynonymous substitutions of the seven MTND genes from 183 Finns. The differences in the total number of nonsynonymous substitutions and the nonsynonymous to synonymous substitution rate ratio ( K(a)/ K(s)) of MTND genes between the European mtDNA haplogroup clusters (HV, JT, KU, IWX) were analysed by using a statistical approach. Patients with PD ( n=238) underwent clinical examination together with mtDNA haplogroup analysis and the clinical features between patient groups defined by the number of nonsynonymous substitutions were compared. Our analysis revealed that the haplogroup clusters HV and KU had a lower average number of amino acid replacements and a lower K(a)/ K(s) ratio in the MTND genes than clusters JT and IWX. Supercluster JTIWX with the highest number of amino acid replacements was more frequent among PD patients and even more frequent among patients with PD who developed dementia. Our results suggest that a relative excess of nonsynonymous mutations in MTND genes in supercluster JTWIX is associated with an increased risk of PD and the disease progression to dementia.

journal_name

Hum Genet

journal_title

Human genetics

authors

Autere J,Moilanen JS,Finnilä S,Soininen H,Mannermaa A,Hartikainen P,Hallikainen M,Majamaa K

doi

10.1007/s00439-004-1123-9

keywords:

subject

Has Abstract

pub_date

2004-06-01 00:00:00

pages

29-35

issue

1

eissn

0340-6717

issn

1432-1203

journal_volume

115

pub_type

杂志文章
  • MPZL2 is a novel gene associated with autosomal recessive nonsyndromic moderate hearing loss.

    abstract::While recent studies have revealed a substantial portion of the genes underlying human hearing loss, the extensive genetic landscape has not been completely explored. Here, we report a loss-of-function variant (c.72delA) in MPZL2 in three unrelated multiplex families from Turkey and Iran with autosomal recessive nonsy...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-018-1901-4

    authors: Bademci G,Abad C,Incesulu A,Rad A,Alper O,Kolb SM,Cengiz FB,Diaz-Horta O,Silan F,Mihci E,Ocak E,Najafi M,Maroofian R,Yilmaz E,Nur BG,Duman D,Guo S,Sant DW,Wang G,Monje PV,Haaf T,Blanton SH,Vona B,Walz K,Te

    更新日期:2018-07-01 00:00:00

  • Generation or birth cohort effect on cancer risk in Li-Fraumeni syndrome.

    abstract::Genetic anticipation is the increased incidence, earlier onset, or increased severity of a disease in successive generations. Before the biological basis of anticipation had been demonstrated, the phenomenon was thought to be due to sampling bias, epigenetic effects, gene conversion, or recombinant events. Since then,...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-005-0016-x

    authors: Brown BW,Costello TJ,Hwang SJ,Strong LC

    更新日期:2005-12-01 00:00:00

  • Linkage disequilibrium relationships among four polymorphisms within the human fibrinogen gene cluster.

    abstract::The extent of linkage equilibrium was estimated among four recently characterized human fibrinogen restriction fragment length polymorphisms (RFLPs) using a randomly selected group of 110 individuals from California. Two coding region RFLPs, RsaI and MnlI (FGA codon 312 and FGB codon 448, respectively), and two RFLPs ...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00202863

    authors: Baumann RE,Henschen AH

    更新日期:1994-08-01 00:00:00

  • Chromosomal abnormalities in human sperm: comparisons among four healthy men.

    abstract::We have used the human-sperm/hamster-egg system to compare the frequencies of structural and numerical chromosomal aberrations in 909 sperm karyotypes from four normal healthy men. The frequency of structural aberrations was 1.3, 4.8, 9.0, and 10.4% respectively in the four donors. Certain specific breakpoints were se...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00286600

    authors: Brandriff B,Gordon L,Ashworth L,Watchmaker G,Carrano A,Wyrobek A

    更新日期:1984-01-01 00:00:00

  • ATM haplotypes and associated mutations in Iranian patients with ataxia-telangiectasia: recurring homozygosity without a founder haplotype.

    abstract::Ataxia-telangiectasia (A-T) is an autosomal recessive disorder caused by mutations in the ATM gene. The ATM gene spans more than 150 kb at chromosomal region 11q23.1 and encodes a product of 3,056 amino acids. The ATM protein is a serine/threonine protein kinase and is involved in oxidative stress, cell cycle control,...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-005-1254-7

    authors: Babaei M,Mitui M,Olson ER,Gatti RA

    更新日期:2005-07-01 00:00:00

  • Association of three-gene interaction among MTHFR, ALOX5AP and NOTCH3 with thrombotic stroke: a multicenter case-control study.

    abstract::Stroke is a common complex trait and does not follow Mendelian pattern of inheritance. Gene-gene or gene-environment interactions may be responsible for the complex trait. How the interactions contribute to stroke is still under research. This study aimed to explore the association between gene-gene interactions and s...

    journal_title:Human genetics

    pub_type: 杂志文章,多中心研究

    doi:10.1007/s00439-009-0659-0

    authors: Liu J,Sun K,Bai Y,Zhang W,Wang X,Wang Y,Wang H,Chen J,Song X,Xin Y,Liu Z,Hui R

    更新日期:2009-06-01 00:00:00

  • Host genetics and viral load in primary HIV-1 infection: clear evidence for gene by sex interactions.

    abstract::Research in the past two decades has generated unequivocal evidence that host genetic variations substantially account for the heterogeneous outcomes following human immunodeficiency virus type 1 (HIV-1) infection. In particular, genes encoding human leukocyte antigens (HLA) have various alleles, haplotypes, or specif...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-014-1465-x

    authors: Li X,Price MA,He D,Kamali A,Karita E,Lakhi S,Sanders EJ,Anzala O,Amornkul PN,Allen S,Hunter E,Kaslow RA,Gilmour J,Tang J,IAVI Africa HIV Prevention Partnership.

    更新日期:2014-09-01 00:00:00

  • Whole-genome sequencing in French Canadians from Quebec.

    abstract::Genome-wide association studies (GWAS) have had a tremendous success in the identification of common DNA sequence variants associated with complex human diseases and traits. However, because of their design, GWAS are largely inappropriate to characterize the role of rare and low-frequency DNA variants on human phenoty...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-016-1702-6

    authors: Low-Kam C,Rhainds D,Lo KS,Provost S,Mongrain I,Dubois A,Perreault S,Robinson JF,Hegele RA,Dubé MP,Tardif JC,Lettre G

    更新日期:2016-11-01 00:00:00

  • HLA-A, B, C, DR alleles in congenital adrenal hyperplasia.

    abstract::HLA markers (A, B, C, DR loci) were determined for the members of 52 unrelated families with at least one child suffering from congenital adrenal hyperplasia due to 21 hydroxylase deficiency, permitting genotyping. The gene frequencies of the 52 index cases were compared with those obtained from the patients' normal h...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00287061

    authors: Couillin P,Kottler-Missonnier ML,Grisard MC,Hors J,Feingold J,Boué J,Boué A

    更新日期:1980-01-01 00:00:00

  • Organization and genomic distribution of "82H" alpha satellite DNA. Evidence for a low-copy or single-copy alphoid domain located on human chromosome 14.

    abstract::We have investigated the organization and genomic distribution of sequences homologous to p82H, a cloned human alpha satellite sequence purported, based on previous in situ hybridization experiments, to exist at the centromere of each human chromosome. We report here that, using Southern blotting analysis under condit...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00291229

    authors: Waye JS,Mitchell AR,Willard HF

    更新日期:1988-01-01 00:00:00

  • Detection of a Tsp509I polymorphism in the 3' UTR of the human tyrosinase related protein-1 (TYRP) gene.

    abstract::We have identified a Tsp509I polymorphism in the 3' UTR of the human tyrosinase related protein-1 gene (TYRP). TYRP is one of several genes involved in melanin pigment production. ...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00209417

    authors: Wildenberg SC,King RA,Oetting WS

    更新日期:1995-02-01 00:00:00

  • Electrophoretic variants of blood proteins in Japanese. III. Triosephosphate isomerase.

    abstract::A total of 15,387 individuals living in Hiroshima and Nagasaki, of whom 10,864 are unrelated, were examined for erythrocyte triosephosphate isomerase (TPI) by starch gel electrophoresis using TEMM buffer, pH 7.4. Four kinds of new variants, one having a cathodal migration and three having anodal migrations, were encou...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00279312

    authors: Asakawa J,Satoh C,Takahashi N,Fujita M,Kaneko J,Goriki K,Hazama R,Kageoka T

    更新日期:1984-01-01 00:00:00

  • Non C-banding variants in some normal families might be homogeneously staining regions.

    abstract::Three families are reported showing transmission of a previously described variant, which is not associated with any clinical abnormality. The variant involves additional material at the band 9p12, which shows homogeneous staining of intermediate density with GTL- and RBG-banding, and negative staining with CBG-bandin...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00288273

    authors: Webb GC,Krumins EJ,Eichenbaum SZ,Voullaire LE,Earle E,Choó KH

    更新日期:1989-04-01 00:00:00

  • The 35 kd pulmonary surfactant-associated protein is encoded on chromosome 10.

    abstract::The genomic components identified by each of two closely related cDNA clones for the major 35 kilodalton non-serum surfactant-associated proteins (PSP-A) were shown to derive from human chromosome 10 by Southern blot analysis of DNAs from human-rodent somatic cell hybrids. By in situ hybridization to human metaphase c...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00283051

    authors: Bruns G,Stroh H,Veldman GM,Latt SA,Floros J

    更新日期:1987-05-01 00:00:00

  • Apolipoprotein B-100 XbaI gene polymorphism in gallbladder cancer.

    abstract::Genetic polymorphisms in the apolipoprotein B (apoB) gene have been reported to be associated with altered serum lipids and susceptibility to cholesterol gallstones (GS). Gallstones are among the well-known risk factors for carcinoma of the gallbladder (GBC). In the present study, the association between the XbaI poly...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-003-1056-8

    authors: Singh MK,Pandey UB,Ghoshal UC,Srivenu I,Kapoor VK,Choudhuri G,Mittal B

    更新日期:2004-02-01 00:00:00

  • Comparison of expression of the fragile site at Xq27 in T and B lymphocytes.

    abstract::We compared the fragile X (fraX) expression in T and B lymphocytes from four hemizygous males with fraX. Blood cultures were stimulated with a T cell mitogen (phytohemagglutinin:PHA) and with a B cell mitogen (pokeweed mitogen:PWM). A significant decrease in fraX expression was observed in cultures stimulated with PWM...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00273003

    authors: Marchese CA,Lin MS,Wilson MG

    更新日期:1984-01-01 00:00:00

  • Structural variations in a non-coding region at 1q32.1 are responsible for the NYS7 locus in two large families.

    abstract::Congenital motor nystagmus (CMN) is characterized by early-onset bilateral ocular oscillations without other ocular deficits. To date, mutations in only one gene have been identified to be responsible for CMN, i.e., FRMD7 for X-linked CMN. Four loci for autosomal dominant CMN, including NYS7 (OMIM 614826), have been m...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-020-02156-0

    authors: Sun W,Li S,Jia X,Wang P,Hejtmancik JF,Xiao X,Zhang Q

    更新日期:2020-08-01 00:00:00

  • Opposite effects on facial morphology due to gene dosage sensitivity.

    abstract::Sequencing technology is increasingly demonstrating the impact of genomic copy number variation (CNV) on phenotypes. Opposing variation in growth, head size, cognition and behaviour is known to result from deletions and reciprocal duplications of some genomic regions. We propose normative inversion of face shape, oppo...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-014-1455-z

    authors: Hammond P,McKee S,Suttie M,Allanson J,Cobben JM,Maas SM,Quarrell O,Smith AC,Lewis S,Tassabehji M,Sisodiya S,Mattina T,Hennekam R

    更新日期:2014-09-01 00:00:00

  • New mechanism of BRCA-1 mutation by deletion/insertion at the same nucleotide position in three unrelated French breast/ovarian cancer families.

    abstract::A novel complex mutation consisting of a small deletion/insertion (3958del5ins4) was found in the breast cancer-1 gene (BRCA-1) in three unrelated French breast and/or ovarian cancer families. These mutations occurred at the same nucleotide position of the 3' end of exon 11. The wild-type sequence, CTCAG, was deleted ...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s004390050826

    authors: Presneau N,Laplace-Marieze V,Sylvain V,Lortholary A,Hardouin A,Bernard-Gallon D,Bignon YJ

    更新日期:1998-09-01 00:00:00

  • Exome sequencing of cases with neural tube defects identifies candidate genes involved in one-carbon/vitamin B12 metabolisms and Sonic Hedgehog pathway.

    abstract::Neural tube defects (NTD) result from complex mechanisms between genes, nutrition and environment. The identification of genetic predictors by genome exome sequencing and their influence on genome methylation need further consideration. Gene variants related to 1-CM metabolism (1-CM) could influence the methylation of...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-019-02015-7

    authors: Renard E,Chéry C,Oussalah A,Josse T,Perrin P,Tramoy D,Voirin J,Klein O,Leheup B,Feillet F,Guéant-Rodriguez RM,Guéant JL

    更新日期:2019-07-01 00:00:00

  • Mitochondrial haplogroup N9b is protective against myocardial infarction in Japanese males.

    abstract::Superoxide, which mitochondria mainly produce in vascular endothelial cells, plays an important role in the pathogenesis of atherosclerosis and coronary artery disease. Accordingly, mitochondrial functional differences are thought to be one of the most important factors for the risk of myocardial infarction among vari...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-006-0269-z

    authors: Nishigaki Y,Yamada Y,Fuku N,Matsuo H,Segawa T,Watanabe S,Kato K,Yokoi K,Yamaguchi S,Nozawa Y,Tanaka M

    更新日期:2007-02-01 00:00:00

  • A rapid technique for producing silver-stained nucleolus organizer regions and trypsin-giemsa bands on human chromosomes.

    abstract::A simple and rapid technique is described whereby the nucleolus organizer regions (NORs) of human chromosomes can be differentially stained with silver. This staining is followed by trypsin-Giemsa banding on the same metaphase chromosomes. The metaphases simultaneously exhibit silver-stained NORs and G bands, allowing...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00396478

    authors: Howell WM,Black DA

    更新日期:1978-07-12 00:00:00

  • PGC-1alpha Thr394Thr and Gly482Ser variants are significantly associated with T2DM in two North Indian populations: a replicate case-control study.

    abstract::The recent observations that Peroxisome proliferator activated receptor gamma coactivator 1 alpha (PGC1A) is responsible for the induction of reactive oxygen species (ROS) detoxifying agents and that ROS triggers insulin resistance, support the role that this gene could play in the onset of Type 2 diabetes mellitus (T...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-007-0352-0

    authors: Bhat A,Koul A,Rai E,Sharma S,Dhar MK,Bamezai RN

    更新日期:2007-06-01 00:00:00

  • Temporary increase in chromosome breakage in an infant prenatally exposed to lead.

    abstract::An infant exposed to high levels of lead in utero was found to have increased numbers of cells with chromosome breaks in blood samples obtained at 6 weeks and 3 months of life. Later samples did not show significant abnormality. Physical and neurological examinations of the patient up to 18 months of age gave results ...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00273496

    authors: Qazi QH,Madahar C,Yuceoglu AM

    更新日期:1980-02-01 00:00:00

  • Amniotic fluid RNA gene expression profiling provides insights into the phenotype of Turner syndrome.

    abstract::Turner syndrome is a sex chromosome aneuploidy with characteristic malformations. Amniotic fluid, a complex biological material, could contribute to the understanding of Turner syndrome pathogenesis. In this pilot study, global gene expression analysis of cell-free RNA in amniotic fluid supernatant was utilized to ide...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-014-1448-y

    authors: Massingham LJ,Johnson KL,Scholl TM,Slonim DK,Wick HC,Bianchi DW

    更新日期:2014-09-01 00:00:00

  • A novel transcript of cyclin-dependent kinase-like 5 (CDKL5) has an alternative C-terminus and is the predominant transcript in brain.

    abstract::The X-linked cyclin-dependent kinase-like 5 (CDKL5) gene is an important molecular determinant of early-onset intractable seizures with infantile spasms and Rett syndrome-like phenotype. The gene encodes a kinase that may influence components of molecular pathways associated with MeCP2. In humans there are two previou...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/s00439-011-1058-x

    authors: Williamson SL,Giudici L,Kilstrup-Nielsen C,Gold W,Pelka GJ,Tam PP,Grimm A,Prodi D,Landsberger N,Christodoulou J

    更新日期:2012-02-01 00:00:00

  • Excess of multifocal tumors in nephroblastoma: implications for mechanisms of tumor development and genetic counseling.

    abstract::Referring to the mutational theory of carcinogenesis in embryonal tumors, it is commonly accepted that patients with multifocal tumors are hereditary cases. This is based on the implicit assumption that each tumor results from a single mutational event occurring in a cell that has already inherited a mutation, and tha...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00217359

    authors: Bonaïti-Pellié C,Chompret A,Tournade MF,Lemerle J,Voute PA,Delemarre JF

    更新日期:1993-05-01 00:00:00

  • Increased HK1 activity levels in the red cells of a patient with a de novo trisomy 10p: t(Y;10)(p11;p12).

    abstract::A male patient with mental retardation and typical clinical features of 10p trisomy syndrome was found to have a duplication of the short arm of chromosome 10 attached to the short arm of the Y chromosome. Quantitative evaluation of nine red cell enzymes showed significantly increased activity levels of HK1 and, to a ...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00295588

    authors: Dallapiccola B,Chessa L,Vignetti P,Ferrante E,Gandini E

    更新日期:1979-01-01 00:00:00

  • Ala45Thr polymorphism of the NEUROD1 gene and diabetes susceptibility: a meta-analysis.

    abstract::A meta-analysis assessed whether the Ala45Thr polymorphism of the neurogenic differentiation 1 (NEUROD1) gene is associated with increased risk of diabetes mellitus type 1 (T1D) or type 2 (T2D). Fourteen case-control studies were analyzed, including genotype data on 3,057 patients with diabetes (T1D n=1,213, T2D n=1,8...

    journal_title:Human genetics

    pub_type: 杂志文章,meta分析

    doi:10.1007/s00439-004-1224-5

    authors: Kavvoura FK,Ioannidis JP

    更新日期:2005-02-01 00:00:00

  • Tangier disease: heterozygote detection and linkage analysis.

    abstract::A large partially inbred kindred segregating Tangier disease is analyzed for linkage to seventeen informative markers. Three criteria were developed to classify heterozygotes and each criterion's validity was subsequently evaluated by assessing the pedigree distribution of diagnoses for internal consistency. The resul...

    journal_title:Human genetics

    pub_type: 杂志文章

    doi:10.1007/BF00569702

    authors: Suarez BK,Schonfeld G,Sparkes RS

    更新日期:1982-01-01 00:00:00