Poly A-linked non-isotopic microtiter plate reverse transcriptase assay for sensitive detection of clinical human immunodeficiency virus isolates.

Abstract:

:A colorimetric reverse transcriptase assay (cRT assay) was developed for quantitative detection of HIV-1. In this format, reverse transcriptase incorporates biotin-labeled dUTP onto oligo-dT primers hybridized to poly A templates. The templates are covalently bound to the surface of microtiter wells. The amount of incorporated biotin-labeled dUTP is measured by binding horseradish peroxidase conjugated streptavidin, washing away unbound peroxidase, adding colorimetric substrate and then reading with a standard colorimetric reader. The sensitivity of the assay is very good. As little as 3 x 10(5) molecules of recombinant HIV-RT can be detected after 20 h of reaction time. Direct comparison using 3 cultured clinical isolates indicates that this level of detection is equivalent to the commercially available p24 antigen capture assay and the HIV-RNA assay based on branched DNA signal amplification. Other retroviruses, such as HIV-2 and feline immunodeficiency virus (FIV), can also be detected in this format. This non-isotopic assay is easy to perform and could provide a convenient and quantitative method for HIV study by monitoring reverse transcriptase, an essential activity in the infection process.

journal_name

J Virol Methods

authors

Suzuki K,Saito T,Kondo M,Osanai M,Watanabe S,Kano T,Kano K,Imai M

doi

10.1016/0166-0934(95)00073-5

subject

Has Abstract

pub_date

1995-11-01 00:00:00

pages

347-56

issue

3

eissn

0166-0934

issn

1879-0984

pii

0166093495000735

journal_volume

55

pub_type

杂志文章
  • A rapid RT-LAMP assay for the detection of all four lineages of Peste des Petits Ruminants Virus.

    abstract::Peste des petits ruminants (PPR) is a viral disease of small ruminants that is caused by the PPR virus (PPRV) and is a significant burden on subsistence farmers across the developing world. Loop-mediated isothermal amplification (LAMP) provides cost-effective, rapid, specific and sensitive detection of nucleic acid an...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2019.113730

    authors: Rajko-Nenow P,Flannery J,Arnold H,Howson ELA,Darpel K,Stedman A,Corla A,Batten C

    更新日期:2019-12-01 00:00:00

  • Chemical inhibition of foamyvirus in primary baboon (Papio cynocephalus) kidney cells.

    abstract::This report describes the conditions for the use of aluminum chloride (AlCl3) in growth and maintenance media for the suppression or inhibition of simian foamyviruses (SFV) in primary baboon kidney (BAK) and rabbit kidney (RK) cell cultures. When RK cells were planted in medium containing AlCl3, infected with SFV, and...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(82)90066-0

    authors: Weiss SA,Heberling RL,Kalter SS

    更新日期:1982-05-01 00:00:00

  • Inhibitory effects of silver nanoparticles on H1N1 influenza A virus in vitro.

    abstract::Silver nanoparticles have demonstrated efficient inhibitory activities against human immunodeficiency virus (HIV) and hepatitis B virus (HBV). However, the effects of silver nanoparticles against H1N1 influenza A virus remain unexplored. In this study, the interaction of silver nanoparticles with H1N1 influenza A viru...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2011.09.003

    authors: Xiang DX,Chen Q,Pang L,Zheng CL

    更新日期:2011-12-01 00:00:00

  • Microarray-based assay for the detection of genetic variations of structural genes of West Nile virus.

    abstract::Adaptation through fixation of spontaneous mutations in the viral genome is considered to be one of the important factors that enable recurrent West Nile virus (WNV) outbreaks in the U.S. Genetic variations can alter viral phenotype and virulence, and degrade the performance of diagnostic and screening assays, vaccine...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2008.09.015

    authors: Grinev A,Daniel S,Laassri M,Chumakov K,Chizhikov V,Rios M

    更新日期:2008-12-01 00:00:00

  • Optimisation and sensitivity of single-stranded conformation polymorphism for the detection of hepatitis C virus quasi-species.

    abstract::Single-stranded conformation polymorphism (SSCP) is a technique used widely for the detection of differences in DNA sequence based on PCR technology. Developed by geneticists for the detection of mutations causing disease, it has been adopted more recently for the analysis of the quasi-species of viral genomes, such a...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/s0166-0934(00)00279-2

    authors: McKechnie VM,McCruden EA

    更新日期:2001-04-01 00:00:00

  • Simple diffusion-constrained immunoassay for p24 protein with the sensitivity of nucleic acid amplification for detecting acute HIV infection.

    abstract::Nucleic acid amplification techniques have become the mainstay for ultimate sensitivity for detecting low levels of virus, including human immunodeficiency virus (HIV). As a sophisticated technology with relative expensive reagents and instrumentation, adoption of nucleic acid testing (NAT) can be cost inhibited in se...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2012.08.017

    authors: Chang L,Song L,Fournier DR,Kan CW,Patel PP,Ferrell EP,Pink BA,Minnehan KA,Hanlon DW,Duffy DC,Wilson DH

    更新日期:2013-03-01 00:00:00

  • Detection of Borna disease virus RNA in naturally infected animals by a nested polymerase chain reaction.

    abstract::Borna disease virus in naturally infected horses, a donkey and sheep was detected for the first time by amplification of viral RNA using PCR. In contrast to a control group of healthy horses, brain tissue was positive by this assay in all animals with neurological symptoms. The use of a second round of PCR with nested...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(94)90098-1

    authors: Zimmermann W,Dürrwald R,Ludwig H

    更新日期:1994-02-01 00:00:00

  • Rapid and cost-effective baculovirus sample preparation method as a viable alternative to conventional preparation for quantitative real-time PCR.

    abstract::The increasing use of the baculovirus expression vector system (BEVS) has generated significant interest into techniques for quantifying baculovirus stocks. One method involves the use of quantitative real-time polymerase chain reaction (PCR). This study investigated simplifying baculovirus sample preparation for quan...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2012.03.001

    authors: George S,Sokolenko S,Aucoin MG

    更新日期:2012-06-01 00:00:00

  • Mass spectrometric detection of the amino acid sequence polymorphism of the hepatitis C virus antigen.

    abstract::A method for detection and identification of the hepatitis C virus antigen (HCVcoreAg) in human serum with consideration for possible amino acid substitutions is proposed. The method is based on a combination of biospecific capturing and concentrating of the target protein on the surface of the chip for atomic force m...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2015.12.012

    authors: Kaysheva AL,Ivanov YD,Frantsuzov PA,Krohin NV,Pavlova TI,Uchaikin VF,Konev VА,Kovalev OB,Ziborov VS,Archakov AI

    更新日期:2016-03-01 00:00:00

  • Production and characterization of monoclonal antibodies against binary ethylenimine inactivated Nipah virus.

    abstract::Nipah virus, a zoonotic paramyxovirus which emerged recently was chemically inactivated using binary ethylenimine (BEI). The inactivated virus was concentrated and purified by sucrose gradient centrifugation. The gradient fractions were examined by electron microscopy and Western immunoblot, and gradient fraction cont...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2005.09.005

    authors: Berhane Y,Berry JD,Ranadheera C,Marszal P,Nicolas B,Yuan X,Czub M,Weingartl H

    更新日期:2006-03-01 00:00:00

  • Quantitation of latency established by attenuated strains of Pseudorabies (Aujeszky's disease) virus.

    abstract::A quantitative and differential polymerase chain reaction (PCR) was developed that measures the ability of Pseudorabies virus (PRV) to colonize tissues that are targets for latency. This PCR is based on the co-amplification of viral target sequences and that of a gene of the host species: the porcine Nuclear Factor 1 ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(94)90183-x

    authors: Schang LM,Osorio FA

    更新日期:1994-12-01 00:00:00

  • Rapid detection of human parvovirus B19 DNA by dot-hybridization and the polymerase chain reaction.

    abstract::The results of a comparison of three DNA-detection methods for human parvovirus B19 DNA are described. The sensitivity of detection of virus from hybridization assays using 32P-radiolabeled DNA and RNA probes was compared with a method for enzymatically amplifying specific target DNA sequences (polymerase chain reacti...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(89)90085-2

    authors: Salimans MM,Holsappel S,van de Rijke FM,Jiwa NM,Raap AK,Weiland HT

    更新日期:1989-01-01 00:00:00

  • Construction of replication competent plasmids of hepatitis B virus subgenotypes A1, A2 and D3 with authentic endogenous promoters.

    abstract::Hepatitis B virus (HBV) is hyperendemic to southern Africa, with genotype A of HBV being the predominant genotype, and subgenotype A1 prevailing. Infection with this subgenotype is associated with rapid disease progression, and high frequency of hepatocellular carcinoma development. The objectives of our study was to ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2014.03.015

    authors: Bhoola NH,Reumann K,Kew MC,Will H,Kramvis A

    更新日期:2014-07-01 00:00:00

  • Long amplicon sequencing for improved genetic characterization of African swine fever virus.

    abstract::African Swine Fever Virus (ASFV) causes a transmissible and fatal disease in pigs that is currently devastating global swine production. Efficient and economical collection of genetic data from ASFV field isolates is essential for bio-surveillance, to limit and control its spread, and to better understand ASF disease ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2020.113946

    authors: Meekins DA,Trujillo JD,Gaudreault NN,Morozov I,Pérez-Núñez D,Revilla Y,Richt JA

    更新日期:2020-11-01 00:00:00

  • Cellufine sulfate column chromatography as a simple, rapid, and effective method to purify dengue virus.

    abstract::Conventional method to purify/concentrate dengue virus (DENV) is time-consuming with low virus recovery yield. Herein, we applied cellufine sulfate column chromatography to purify/concentrate DENV based on the mimicry between heparan sulfate and DENV envelope protein. Comparative analysis demonstrated that this new me...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2016.04.023

    authors: Kanlaya R,Thongboonkerd V

    更新日期:2016-08-01 00:00:00

  • Validation of a foot-and-mouth disease antibody screening solid-phase competition ELISA (SPCE).

    abstract::This paper describes the validation of a solid-phase competition enzyme-linked immunosorbent assay (SPCE) for the serological detection of antibody to serotype O foot-and-mouth disease (FMD) in sheep, cattle and pigs. The specificity of the SPCE was calculated from the results of testing known negative sera from sheep...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2003.09.016

    authors: Paiba GA,Anderson J,Paton DJ,Soldan AW,Alexandersen S,Corteyn M,Wilsden G,Hamblin P,MacKay DK,Donaldson AI

    更新日期:2004-02-01 00:00:00

  • Real-time quantitative PCR for assessment of antiviral drug effects against Epstein-Barr virus replication and EBV late mRNA expression.

    abstract::This study assesses the ability of quantitative real-time PCR to measure the effects of virus DNA polymerase inhibitors on EBV DNA and late mRNAs syntheses in EBV-producing cell lines. In-house real-time quantitative PCRs were used to measure EBV DNA (thymidine kinase) and mRNAs (BLLF1 gene/gp350/220, BVRF2 gene/prote...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2007.02.005

    authors: Ballout M,Germi R,Fafi-Kremer S,Guimet J,Barguès G,Seigneurin JM,Morand P

    更新日期:2007-07-01 00:00:00

  • A real time genotyping PCR assay for polyomavirus BK.

    abstract:BACKGROUND:Polyomavirus BK (BKV) may cause nephropathy in renal transplant recipients and hemorrhagic cystitis in bone marrow recipients. We developed real-time PCRs (RT-PCR) to determine easily and rapidly the different BKV genotypes (BKGT) (I-IV). METHODS:On the VP1 gene a duplex of RT-PCRs was developed and validat...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2015.04.024

    authors: Gard L,Niesters HG,Riezebos-Brilman A

    更新日期:2015-09-01 00:00:00

  • Evaluation of a semi-automatic radioimmunoassay for hepatitis B surface antigen (HBsAg).

    abstract::The recently developed semi-automatic Hepatube system was evaluated in comparison to another radioimmunoassay for the detection of hepatitis B surface antigen (HBsAg), the manual Ausria II-125 test. After incubation of serum in anti-HBs coated tubes, the Hepatube system uses a machine to wash the tubes and to add trac...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(83)90074-5

    authors: de Vries J,Kruining J,Heijtink RA

    更新日期:1983-02-01 00:00:00

  • Detection of foot-and-mouth disease virus RNA in clinical samples and cell culture isolates by amplification of the capsid coding region.

    abstract::Foot-and-mouth disease is one of the most economically important virus diseases of livestock. Two important requirements for the control of this disease are rapid laboratory diagnosis and epidemiological investigation. The use of the polymerase chain reaction method (PCR) to amplify specific nucleic acid regions offer...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(93)90176-r

    authors: Höfner MC,Carpenter WC,Donaldson AI

    更新日期:1993-04-01 00:00:00

  • Development of a TaqMan-based real-time RT-PCR assay for the detection of SADS-CoV associated with severe diarrhea disease in pigs.

    abstract::Swine acute diarrhea syndrome coronavirus (SADS-CoV) is a novel coronavirus which was first reported in southern China in 2017. It can cause severe diarrhea disease in pigs. In order to detect this new emerging virus rapidly and reliably, a TaqMan-based real-time RT-PCR assay was established in this study. Specific pr...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2018.02.002

    authors: Zhou L,Sun Y,Wu JL,Mai KJ,Chen GH,Wu ZX,Bai Y,Li D,Zhou ZH,Cheng J,Wu RT,Zhang XB,Ma JY

    更新日期:2018-05-01 00:00:00

  • Image analysis for accurately counting CD4+ and CD8+ T cells in human tissue.

    abstract::In situ detection of specific cells offers a unique perspective on the spatial interactions between host immune cells and specific viral pathogens or cancers. Most immunohistochemistry techniques require manual cell counting on biopsied and fixed tissue sections. The availability of sophisticated software packages for...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2015.06.004

    authors: Diem K,Magaret A,Klock A,Jin L,Zhu J,Corey L

    更新日期:2015-09-15 00:00:00

  • Assays for precise quantification of total (including short) and elongated HIV-1 transcripts.

    abstract::Despite intensive study, it is unclear which mechanisms are responsible for latent HIV infection in vivo. One potential mechanism is inhibition of HIV transcriptional elongation, which results in short abortive transcripts containing the trans-activation response (TAR) region. Because the relative levels of total (inc...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2016.12.017

    authors: Kaiser P,Joshi SK,Kim P,Li P,Liu H,Rice AP,Wong JK,Yukl SA

    更新日期:2017-04-01 00:00:00

  • A comparison of RT-PCR, in-situ hybridisation and in-situ RT-PCR for the detection of rhinovirus infection in paraffin sections.

    abstract::We describe an in-situ RT-PCR method for the amplification of rhinovirus (RV) in fixed, paraffin-embedded HeLa cells employed as a model for human respiratory epithelium. HeLa cells were infected in-vitro with inocula of rhinovirus-16 ranging from 10(2) to 10(6) 50% tissue culture infective doses (TCID50), incubated f...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/s0166-0934(97)00095-5

    authors: Bates PJ,Sanderson G,Holgate ST,Johnston SL

    更新日期:1997-09-01 00:00:00

  • Evaluation of the efficacy of disinfectants against Puumala hantavirus by real-time RT-PCR.

    abstract::Puumala virus, a hantavirus belonging to the Bunyaviridae family, causes a human disease known as nephropathia epidemica, a mild form of hemorrhagic fever with renal syndrome. The implementation of effective decontamination procedures is critical in hantavirus research to minimize the risk of personnel exposure. This ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2006.11.037

    authors: Maes P,Li S,Verbeeck J,Keyaerts E,Clement J,Van Ranst M

    更新日期:2007-04-01 00:00:00

  • A cost-effective algorithm for the diagnosis of Hepatitis C virus infection and prediction of HCV viremia in Cameroon.

    abstract::Conventional tests for antibody to Hepatitis C virus (HCV) and HCV RNA require considerable time before results are available, remain very expensive and are not adapted to many sub-Saharan African countries where HCV is endemic. The aim of this study was to evaluate the accuracy of an algorithm consisting of two HCV r...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2005.11.001

    authors: Njouom R,Tejiokem MC,Zanga MC,Pouillot R,Ayouba A,Pasquier C,Nerrienet E

    更新日期:2006-05-01 00:00:00

  • Development of a versatile and stable internal control system for RT-qPCR assays.

    abstract::RT-qPCR, an established method for the detection of RNA viruses, requires internal RNA controls for the correct interpretation of PCR results. Robust and versatile RT-PCR controls can be achieved for example by packaging RNA into a virus-derived protein shell. In this study a MS2-based internal control system was deve...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/j.jviromet.2014.07.028

    authors: Felder E,Wölfel R

    更新日期:2014-11-01 00:00:00

  • A biotin-avidin-amplified inhibition enzyme immunoassay for detection of CMV antibodies in human serum.

    abstract::In this inhibition immunoassay undiluted serum reacts in solution with crude cellular CMV antigen in wells of microtestplates coated with hyperimmune CMV-reactive monkey IgG. CMV antibodies in the serum under test block (completely or partial) the fixation of antigen to the capture layer. Unblocked antigenic activity ...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(87)90004-8

    authors: Nielsen CM,Hansen K,Andersen HM,Gerstoft J,Vestergaard BF

    更新日期:1987-06-01 00:00:00

  • Highly sensitive immunoassays for detection of barley stripe mosaic virus and beet necrotic yellow vein virus.

    abstract::Enzyme immunoassays based on the use of monoclonal antibodies (MAbs) were developed for the detection of the barley stripe mosaic virus (BSMV) and the beet necrotic yellow vein virus (BNYVV). Assays employing conjugates of MAbs to horseradish peroxidase (HRP) were compared to systems with biotinylated MAbs and strepta...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(95)01962-6

    authors: Sukhacheva E,Novikov V,Plaksin D,Pavlova I,Ambrosova S

    更新日期:1996-02-01 00:00:00

  • A fluorescence-based quantitative PCR method for investigation of pseudorabies virus latency.

    abstract::A quantitative PCR method was developed in order to quantitate the number of copies of Pseudorabies virus (PRV) genome present in tissues from infected pigs. The method is based on the use of an internal standard that differs from the target DNA by a deletion of ten base pairs, and that is co-amplified with the target...

    journal_title:Journal of virological methods

    pub_type: 杂志文章

    doi:10.1016/0166-0934(96)02072-1

    authors: Thiery R,Pannetier C,Rziha HJ,Jestin A

    更新日期:1996-09-01 00:00:00