Direct identification of Mycobacterium haemophilum in skin lesions of immunocompromised patients by PCR-restriction endonuclease analysis.

Abstract:

:PCR-restriction endonuclease analysis (PRA) was used for direct identification of Mycobacterium haemophilum in clinical specimens from immunocompromised patients. PRA correctly identified M. haemophilum in four smear-positive specimens. Direct identification by PRA takes 2 to 3 working days compared to the 3 to 5 weeks required for culture isolation and identification by conventional methods.

journal_name

J Clin Microbiol

authors

Wang SX,Sng LH,Leong HN,Tan BH

doi

10.1128/JCM.42.7.3336-3338.2004

subject

Has Abstract

pub_date

2004-07-01 00:00:00

pages

3336-8

issue

7

eissn

0095-1137

issn

1098-660X

pii

42/7/3336

journal_volume

42

pub_type

杂志文章
  • Comparison of arbitrarily primed polymerase chain reaction, ribotyping, and monoclonal antibody analysis for subtyping Legionella pneumophila serogroup 1.

    abstract::Arbitrarily primed polymerase chain reaction (AP-PCR) was used to characterize Legionella pneumophila serogroup 1. Cells from a single colony could be subtyped by AP-PCR within a few hours. The discrimination between strains of L. pneumophila serogroup 1 by AP-PCR was equivalent to that by monoclonal antibody analysis...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.31.7.1940-1942.1993

    authors: Gomez-Lus P,Fields BS,Benson RF,Martin WT,O'Connor SP,Black CM

    更新日期:1993-07-01 00:00:00

  • Characterization of freshly isolated Campylobacter coli strains and suitability of selective media for their growth.

    abstract::Typical and atypical Campylobacter strains were isolated from the colons of cattle and swine by techniques that enabled the selective pressures of antibiotics to be avoided. Some cephalothin-susceptible strains and a strain with an indeterminate hippurate reaction were classified as Campylobacter coli by DNA homology ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.26.3.518-523.1988

    authors: Ng LK,Taylor DE,Stiles ME

    更新日期:1988-03-01 00:00:00

  • Euparal as a permanent mounting medium for helminth eggs and proglottids.

    abstract::The importance of euparal as a permanent mounting medium for eggs of parasites and the process of making permanent slides are analyzed and discussed in detail. Studies show that helminth eggs mounted in euparal exhibit excellent optical and drying properties. Euparal also can be used to identify proglottids of Taenia ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.12.5.700-703.1980

    authors: Berlin OG,Miller MJ

    更新日期:1980-11-01 00:00:00

  • Simple disk-plate method for the biochemical confirmation of pathogenic Neisseria.

    abstract::The carbohydrate fermentation test in cystine trypticase agar (BBL)-tubed medium was compared with a simple method using commercially available carbohydrate impregnated disks on culture inoculated Thayer-Martin medium with and without (vancomycin, colistimethate, and nystatin) inhibitors. There was 100% agreement betw...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:

    authors: Valu JA

    更新日期:1976-02-01 00:00:00

  • Ocular infection caused by Psychrobacter immobilis acquired in the hospital.

    abstract::The name Psychrobacter immobilis recently has been proposed for a group of chiefly psychrotrophic, aerobic, gram-negative, nonmotile, oxidase-positive coccobacilli commonly found associated with fish, processed meat, and poultry products. This article reports an ocular infection in a 12-day-old newborn who acquired th...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.28.2.400-401.1990

    authors: Gini GA

    更新日期:1990-02-01 00:00:00

  • Detection of dengue virus type 2 in Aedes albopictus by nucleic acid hybridization with strand-specific RNA probes.

    abstract::A molecular hybridization technique with radiolabeled, strand-specific RNA probes was developed to detect dengue virus type 2 RNA in pools of infected Aedes albopictus mosquitoes. One infected mosquito in a pool of 25 could be detected, corresponding to a dengue virus type 2 titer of 2.75 log10 50% tissue culture infe...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.26.3.579-581.1988

    authors: Olson K,Blair C,Padmanabhan R,Beaty B

    更新日期:1988-03-01 00:00:00

  • Analysis of Neisseria gonorrhoeae for in situ beta-lactamase production by reagent-impregnated filter paper replica methods.

    abstract::Reagent-impregnated filter paper replica methods are described which can be used to detect all penicillinase (beta-lactamase)-producing Neisseria gonorrhoeae (PPNG) colonies in an entire population of Neisseria gonorrhoeae growing on primary isolation plates. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.17.3.545-547.1983

    authors: Bae BH,Ledesma G,Korzis J

    更新日期:1983-03-01 00:00:00

  • Development of an enzyme-linked immunosorbent assay for caprine arthritis-encephalitis virus.

    abstract::Because relatively few caprine arthritis-encephalitis virus (CAEV)-infected animals exhibit clinical signs of illness, efforts to control and eradicate this virus will depend heavily on a sensitive diagnostic test that can be easily carried out. The currently utilized tests are of limited usefulness because of relativ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.26.5.971-975.1988

    authors: Archambault D,East N,Perk K,Dahlberg JE

    更新日期:1988-05-01 00:00:00

  • Comparison of drug sensitivity testing with microdilution quantitative minimum inhibitory concentration and the Autobac I system.

    abstract::Antibiotic susceptibility studies were compared by the quantitative minimum inhibitory concentration and Autobac I. Four hundred common isolates from clinical materials including both gram-negative and -positive organisms were evaluated. Results demonstrate that the Autobac I method can provide reliable semiquantitati...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.11.5.465-469.1980

    authors: Jacob CV,Kleineman J

    更新日期:1980-05-01 00:00:00

  • Prosthetic joint infection caused by Helcococcus kunzii.

    abstract::Helcococcus kunzii was isolated by sonication and conventional cultures obtained from a case of infection following total knee prosthesis in an immunocompetent patient. The patient recovered uneventfully. This is the first known case of an H. kunzii prosthetic joint infection. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01244-11

    authors: Pérez-Jorge C,Cordero J,Marin M,Esteban J

    更新日期:2012-02-01 00:00:00

  • Identification of viridans streptococci isolated from clinical specimens.

    abstract::Of 532 strains of viridans streptococci isolated from clinical specimens, 517 were identified by using a scheme based on the work of Facklam (R. R. Facklam, J. Clin. Microbiol. 5:184-201, 1977). The strains were distributed among nine of the species described by Facklam and an additional group of physiologically homog...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.15.5.920-925.1982

    authors: Ruoff KL,Kunz LJ

    更新日期:1982-05-01 00:00:00

  • Complement fixation antibody test for human nocardiosis.

    abstract::Complement-fixing antibody was detected in 13 of 16 patients with histological and/or culture evidence of infection with Nocardia species. The antigen used was a filtrate of soluble substances secreted into liquid growth medium by cultures of N. asteroides. Apparent false positives reactions were found in three of thr...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:

    authors: Shainhouse JZ,Pier AC,Stevens DA

    更新日期:1978-11-01 00:00:00

  • PCR strategy for identification and differentiation of small pox and other orthopoxviruses.

    abstract::Rapid identification and differentiation of orthopoxviruses by PCR were achieved with primers based on genome sequences encoding the hemagglutinin (HA) protein, an infected-cell membrane antigen that distinguishes orthopoxviruses from other poxvirus genera. The initial identification step used a primer pair of consens...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.33.8.2069-2076.1995

    authors: Ropp SL,Jin Q,Knight JC,Massung RF,Esposito JJ

    更新日期:1995-08-01 00:00:00

  • Stability of cervical specimens in SurePath medium for human papillomavirus testing with the Roche cobas 4800 assay.

    abstract::The stability of cervical specimens in SurePath preservative fluid for human papillomavirus (HPV) testing with Roche cobas 4800 was determined using a panel of 308 pooled specimens from a colposcopy referral population. The SurePath specimens appeared to be stable for up to 10 weeks at ambient temperature for HPV test...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01391-13

    authors: Gilbert L,Oates E,Ratnam S

    更新日期:2013-10-01 00:00:00

  • Evidence for subclinical influenza A(H1N1)pdm09 virus infection among dogs in Guangdong Province, China.

    abstract::During 2012, we identified sampled dogs with elevated levels of antibodies (≥1:40) against A(H1N1)pdm09 virus by using a hemagglutination inhibition (HI) assay (seroprevalence, 24.7%) and a microneutralization (MN) assay (seroprevalence, 10.8%). These high seroprevalences of A(H1N1)pdm09 among dogs without clinical si...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.03522-13

    authors: Su S,Chen J,Jia K,Khan SU,He S,Fu X,Hong M,Sun L,Qi W,Gray GC,Li S

    更新日期:2014-05-01 00:00:00

  • Evaluation of an rRNA-derived oligonucleotide probe for culture confirmation of Neisseria gonorrhoeae.

    abstract::The reliability of an rRNA-derived oligonucleotide probe for Neisseria gonorrhoeae was tested with 187 N. gonorrhoeae isolates, 81 Neisseria meningitidis isolates, and several strains of other bacterial species. The probe proved to be 100% specific and 100% sensitive. N. gonorrhoeae cells could also be reliably identi...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.28.5.944-948.1990

    authors: Rossau R,Duhamel M,Van Dyck E,Piot P,Van Heuverswyn H

    更新日期:1990-05-01 00:00:00

  • Heminested inverse PCR for IS6110 fingerprinting of Mycobacterium tuberculosis strains.

    abstract::A heminested inverse PCR (HIP) for the amplification of sequences flanking the Mycobacterium tuberculosis insertion sequence IS6110 has been developed. The method depends upon primers that anneal to IS6110 at sites between its 5' end and the closest BsrFI site. The accuracy of HIP was demonstrated by the amplification...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.34.7.1686-1690.1996

    authors: Patel S,Wall S,Saunders NA

    更新日期:1996-07-01 00:00:00

  • Molecular parameters for precise diagnosis of asymptomatic Epstein-Barr virus reactivation in healthy carriers.

    abstract::Asymptomatic Epstein-Barr virus (EBV) reactivations periodically occur in oral mucosa-associated lymphoid tissues. Until now, EBV reactivation has been diagnosed by serologic profiles that suggest virus replication. Serologic responses, however, are delayed and do not necessarily indicate ongoing replicative activity....

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/jcm.41.12.5419-5428.2003

    authors: Maurmann S,Fricke L,Wagner HJ,Schlenke P,Hennig H,Steinhoff J,Jabs WJ

    更新日期:2003-12-01 00:00:00

  • Reactivity of coagulase-negative staphylococci isolated from cow and goat milk with monoclonal antibodies to Staphylococcus aureus capsular polysaccharide types 5 and 8.

    abstract::Monoclonal antibodies to Staphylococcus aureus capsular polysaccharide types 5 and 8 were used in an enzyme-linked immunosorbent assay to serotype 74 and 42 coagulase-negative isolates from cow and goat milk, respectively. Eighteen (15.5%) isolates were typable: 13 Staphylococcus haemolyticus, 1 S. hyicus, 1 S. simula...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.28.2.358-360.1990

    authors: Poutrel B,Mendolia C,Sutra L,Fournier JM

    更新日期:1990-02-01 00:00:00

  • Characterization of Streptococcus agalactiae strains by randomly amplified polymorphic DNA analysis.

    abstract::A collection of 54 unrelated Streptococcus agalactiae strains isolated from cerebrospinal fluid samples from neonates and 60 unrelated strains isolated from carriers that had been previously studied by multilocus enzyme electrophoresis (R. Quentin, H. Huet, F.-S. Wang, P. Geslin, A. Goudeau, and R. K. Selander, J. Cli...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.35.10.2573-2579.1997

    authors: Chatellier S,Ramanantsoa C,Harriau P,Rolland K,Rosenau A,Quentin R

    更新日期:1997-10-01 00:00:00

  • Simultaneous identification of mycobacterial isolates to the species level and determination of tuberculosis drug resistance by PCR followed by electrospray ionization mass spectrometry.

    abstract::Mycobacterium tuberculosis that is resistant to both isoniazid (INH) and rifampin (RIF) is spreading. It has become a public health problem in part because the standard culture methods used to determine the appropriate treatment regimen for patients often take months following the presumptive diagnosis of tuberculosis...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01578-10

    authors: Massire C,Ivy CA,Lovari R,Kurepina N,Li H,Blyn LB,Hofstadler SA,Khechinashvili G,Stratton CW,Sampath R,Tang YW,Ecker DJ,Kreiswirth BN

    更新日期:2011-03-01 00:00:00

  • Comparison of different tissue cultures for isolation and quantitation of influenza and parainfluenza viruses.

    abstract::Rhesus and cynomolgus monkey kidney tissue cultures and two continuous lines, Madin-Darby canine kidney (MDCK) and LLC-MK2, were compared in titrations and isolations of influenza and parainfluenza viruses. Tube cultures were inoculated with laboratory virus strains or stored patient specimens and observed for hemadso...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.10.1.32-36.1979

    authors: Frank AL,Couch RB,Griffis CA,Baxter BD

    更新日期:1979-07-01 00:00:00

  • Catheter-related sepsis due to Rhodotorula glutinis.

    abstract::We describe a central venous catheter-related (Port-A-Cath; Smiths Industries Medical Systems [SIMS] Deltec, Inc., St. Paul, Minn.) infection caused by Rhodotorula glutinis in a 51-year-old man with nasopharyngeal carcinoma. He was treated with fluconazole for 8 weeks and had the catheter removed. Two isolates of R. g...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/jcm.41.2.857-859.2003

    authors: Hsueh PR,Teng LJ,Ho SW,Luh KT

    更新日期:2003-02-01 00:00:00

  • Performance of a PCR assay for detection of Pneumocystis carinii from respiratory specimens.

    abstract::This study evaluates the performance of a PCR assay for the detection of Pneumocystis carinii from respiratory specimens that has been designed for use in the clinical microbiology laboratory. The test includes a simple method for nucleic acid extraction and amplification, a colorimetric probe hybridization technique ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.36.4.979-982.1998

    authors: Caliendo AM,Hewitt PL,Allega JM,Keen A,Ruoff KL,Ferraro MJ

    更新日期:1998-04-01 00:00:00

  • Screening for antimicrobial resistance in fecal samples by the replica plating method.

    abstract::Replica plating can be used for the detection of antibiotic resistance in normal flora. We have evaluated this application of the replica plating method by comparing it with a five-colony method. The replica plating method uses a single plate for each antibiotic, with a concentration just above that for borderline res...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.33.12.3146-3149.1995

    authors: Osterblad M,Leistevuo T,Huovinen P

    更新日期:1995-12-01 00:00:00

  • Epidemiological study of a food-borne outbreak of enterotoxigenic Escherichia coli O25:NM by pulsed-field gel electrophoresis and randomly amplified polymorphic DNA analysis.

    abstract::This study investigated the applicability of molecular epidemiological techniques to the identification of the causal agent of an outbreak of diarrhea caused by ingestion of food contaminated with enterotoxigenic Escherichia coli (ETEC). The outbreak occurred at four elementary schools in July 1996 and affected more t...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.36.3.652-656.1998

    authors: Mitsuda T,Muto T,Yamada M,Kobayashi N,Toba M,Aihara Y,Ito A,Yokota S

    更新日期:1998-03-01 00:00:00

  • Applications of restriction endonuclease fingerprinting of chromosomal DNA of Neisseria meningitidis.

    abstract::Restriction endonucleases are bacterial enzymes that cleave DNA at specific sites. The resulting DNA fragments may be separated electrophoretically in gel to form specific restriction patterns. In the present study, the restriction endonuclease method was successfully adapted to the analysis of the chromosomal DNA of ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.19.6.763-765.1984

    authors: Bjorvatn B,Lund V,Kristiansen BE,Korsnes L,Spanne O,Lindqvist B

    更新日期:1984-06-01 00:00:00

  • Bacteriological and electron microscopy examination of brown pigment stones.

    abstract::Bacteriological and morphological studies of 38 brown pigment common duct stones were performed. Stone cultures were positive for bacteria in 80.5% of those studied. Enterococci were the most common organisms that were isolated. Scanning electron microscopy showed the presence of bacteria in 84.2% of the stones. The b...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.27.5.915-921.1989

    authors: Leung JW,Sung JY,Costerton JW

    更新日期:1989-05-01 00:00:00

  • Sensitive receptor-specified enzyme-linked immunosorbent assay for Escherichia coli verocytotoxin.

    abstract::The specific identification of verocytotoxin (VT)-producing Escherichia coli (VTEC) requires the detection of VTs in bacterial culture filtrates or the detection of genes encoding these toxins in bacterial cells by specific DNA probes. The standard method for detecting these toxins involves a time-consuming, labor-int...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.27.7.1617-1622.1989

    authors: Basta M,Karmali M,Lingwood C

    更新日期:1989-07-01 00:00:00

  • Sensitive and rapid detection of herpes simplex virus and varicella-zoster virus DNA by loop-mediated isothermal amplification.

    abstract::Loop-mediated isothermal amplification (LAMP) is a novel nucleic acid amplification method in which reagents react rapidly and efficiently, with a high specificity, under isothermal conditions. We used a LAMP assay for the detection of herpes simplex virus type 1 (HSV-1), herpes simplex virus type 2 (HSV-2), and varic...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.43.7.3290-3296.2005

    authors: Kaneko H,Iida T,Aoki K,Ohno S,Suzutani T

    更新日期:2005-07-01 00:00:00