Extracellular plant DNA in Geneva groundwater and traditional artesian drinking water fountains.

Abstract:

:DNA, as the signature of life, has been extensively studied in a wide range of environments. While DNA analysis has become central to work on natural gene exchange, forensic analyses, soil bioremediation, genetically modified organisms, exobiology, and palaeontology, fundamental questions about DNA resistance to degradation remain. This paper investigated on the presence of plant DNA in groundwater and artesian fountain (groundwater-fed) samples, which relates to the movement and persistence of DNA in the environment. The study was performed in the groundwater and in the fountains, which are considered as a traditional artesian drinking water in Geneva Champagne Basin. DNA from water samples was extracted, analysed and quantified. Plant gene sequences were detected using PCR amplification based on 18S rRNA gene primers specific for eukaryotes. Physicochemical parameters of water samples including temperature, pH, conductivity, organic matter, dissolved organic carbon (DOC) and total organic carbon (TOC) were measured throughout the study. The results revealed that important quantities of plant DNA can be found in the groundwater. PCR amplification based on 18S rDNA, cloning, RFLP analysis and sequencing demonstrated the presence of plant DNA including Vitis rupestris, Vitis berlandieri, Polygonum sp. Soltis, Boopis graminea, and Sinapis alba in the water samples. Our observations support the notion of plant DNA release, long-term persistence and movement in the unsaturated medium as well as in groundwater aquifers.

journal_name

Chemosphere

journal_title

Chemosphere

authors

Poté J,Mavingui P,Navarro E,Rosselli W,Wildi W,Simonet P,Vogel TM

doi

10.1016/j.chemosphere.2008.12.048

subject

Has Abstract

pub_date

2009-04-01 00:00:00

pages

498-504

issue

4

eissn

0045-6535

issn

1879-1298

pii

S0045-6535(08)01567-1

journal_volume

75

pub_type

杂志文章
  • Locomotor activity changes on zebrafish larvae with different 2,2',4,4'-tetrabromodiphenyl ether (PBDE-47) embryonic exposure modes.

    abstract::Polybrominated diphenyl ethers (PBDEs) are widely used flame retardants and are banned around the world as potent environmental contaminants. PBDE-47 is the most concerned PBDE with its environmental prevalence and various toxicity characteristics including neurotoxicity. In this paper, we studied larval zebrafish beh...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2013.09.010

    authors: Zhao J,Xu T,Yin DQ

    更新日期:2014-01-01 00:00:00

  • Removal of cyclohexane gaseous emissions using a biotrickling filter system.

    abstract::The removal of cyclohexane from gaseous emissions was studied using a biotrickling filter packed with polyurethane foam. Acivodorax sp. CHX100 was chosen as inoculum due to its ability to use cyclohexane as carbon source. Performance was evaluated by means of different resident times from 18 s to 37 s and concentratio...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2017.02.078

    authors: Salamanca D,Dobslaw D,Engesser KH

    更新日期:2017-06-01 00:00:00

  • Development of a passive air sampler to measure airborne organophosphorus pesticides and oxygen analogs in an agricultural community.

    abstract::Organophosphorus pesticides are some of the most widely used insecticides in the US, and spray drift may result in human exposures. We investigate sampling methodologies using the polyurethane foam passive air sampling device to measure cumulative monthly airborne concentrations of OP pesticides chlorpyrifos, azinphos...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2014.03.064

    authors: Armstrong JL,Yost MG,Fenske RA

    更新日期:2014-09-01 00:00:00

  • Influence of dispersants on bioconcentration factors of seven organic compounds with different lipophilicities and structures.

    abstract::Seven compounds with different lipophilicities and structures--1,3,5-trichlorobenzene, pentachlorobenzene, acenaphthylene, 1,4-dimethyl-2-(1-methylphenyl)benzene, 4-ethylbiphenyl, 4,4'-dibromobiphenyl, and 1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane--were subjected to bioconcentration tests in carp at concentrations...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2006.01.044

    authors: Yakata N,Sudo Y,Tadokoro H

    更新日期:2006-09-01 00:00:00

  • Appraisal of heavy metal contents in groundwater and associated health hazards posed to human population of Ropar wetland, Punjab, India and its environs.

    abstract::Heavy metals are well recognised for their toxicity and pose human health risks even at very low levels. In the present work, groundwater from Ropar wetland, Punjab, India and its environs (18 sites), were analysed for physico-chemical parameters, water quality indices, heavy metal contents (cadmium, cobalt, chromium,...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2019.04.009

    authors: Sharma S,Nagpal AK,Kaur I

    更新日期:2019-07-01 00:00:00

  • Investigating the affinities and persistence of VX nerve agent in environmental matrices.

    abstract::Laboratory experiments were conducted to determine environmental variables that affect the affinities and persistence of the nerve agent O-ethyl S-(2-diisopropylaminoethyl) methylphosphonothiolate (VX) at dilute concentrations in environmental matrices. Quantitative analyses of VX and its degradation products were per...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2004.08.041

    authors: Love AH,Vance AL,Reynolds JG,Davisson ML

    更新日期:2004-12-01 00:00:00

  • Transformation pathways of arsenic species: SRB mediated mechanism and seasonal patterns.

    abstract::Sulfate reducing bacteria (SRB) mediated reduction plays a key role in the biological cycling of As, which inherently associates with the transformation of As species. However, the potential pathways of As species transformation, the predominant driving process and their explanatory factors regulating seasonal As mobi...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2020.128255

    authors: Shi W,Song W,Luo Y,Qile G,Zheng J,Lü C,He J

    更新日期:2021-01-01 00:00:00

  • Trophic relationships and transference of cadmium, copper, lead and zinc in a subtropical coastal lagoon food web from SE Gulf of California.

    abstract::Trophic relationships and heavy metal transference in a coastal subtropical lagoon marine food web were investigated through the use of stable isotopes in food sources and biota. A selective extraction scheme was applied to the surface sediments as an indirect way to evaluate the potential of toxicity of metals. Resul...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2009.09.025

    authors: Jara-Marini ME,Soto-Jiménez MF,Páez-Osuna F

    更新日期:2009-11-01 00:00:00

  • The problem with implementing fish farms in agricultural regions: A trial in a pampean pond highlights potential risks to both human and fish health.

    abstract::The safety of creating fish farms in agricultural settings was evaluated by growing Piaractus mesopotamicus in a pond, while crops where cultivated in a nearby field under a pesticide application regime typical of the Pampa region. Atrazine, glyphosate and its metabolite, aminomethylphosphonic acid (AMPA), were detect...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2020.128408

    authors: Brodeur JC,Poletta GL,Simoniello MF,Carriquiriborde P,Cristos DS,Pautasso N,Paravani E,Poliserpi MB,D'Andrea MF,Gonzalez PV,Aca VL,Curto AE

    更新日期:2021-01-01 00:00:00

  • Emissions of PBDD/Fs, PCDD/Fs and PBDEs from flame-retarded high-impact polystyrene under thermal stress.

    abstract::The emissions of polybrominated diphenyl ethers (PBDEs), polybrominated dibenzo-p-dioxins and dibenzofurans (PBDD/Fs) and their chlorinated analogues (PCDD/Fs) during the thermal treatment of a high impact polystyrene (HIPS) TV casing were investigated. The halogenated compounds were analyzed in the original material ...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2014.10.085

    authors: Ortuño N,Lundstedt S,Lundin L

    更新日期:2015-03-01 00:00:00

  • Evaluation of pectin binding of heavy metal ions in aqueous solutions.

    abstract::Evaluation of adsorption performance of several industrially manufactured pectins towards some toxic heavy metals was carried out. Adsorption isotherms for divalent cations in simulant aqueous solutions were measured and corresponding distribution coefficients were calculated. The following selectivity sequences we fo...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/s0045-6535(98)00466-4

    authors: Kartel MT,Kupchik LA,Veisov BK

    更新日期:1999-05-01 00:00:00

  • Reproduction obstacles for the female green neon shrimp (Neocaridina denticulata) after exposure to chlordane and lindane.

    abstract::The purpose of this study was to investigate the effects of chlordane and lindane on reproduction obstacles and endocrine disruption in female green neon shrimp (Neocaridina denticulata). Individuals of N. denticulata, a common inhabitant of freshwater systems in Taiwan, was exposed to different levels of chlordane (1...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2005.12.017

    authors: Huang DJ,Chen HC,Wu JP,Wang SY

    更新日期:2006-06-01 00:00:00

  • Ecotoxicological assessment of cimetidine and determination of its potential for endocrine disruption using three test organisms: Daphnia magna, Moina macrocopa, and Danio rerio.

    abstract::Cimetidine is a histamine H2-receptor antagonist used for treatment of gastrointestinal disorders. It is often detected in aquatic environments, but its ecotoxicological effects have not been well studied. Thus, ecotoxicity of cimetidine was evaluated using Daphnia magna and Moina macrocopa, and zebrafish (Danio rerio...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2015.04.033

    authors: Lee S,Jung D,Kho Y,Ji K,Kim P,Ahn B,Choi K

    更新日期:2015-09-01 00:00:00

  • Facile fabrication of a conductive polypyrrole membrane for anti-fouling enhancement by electrical repulsion and in situ oxidation.

    abstract::Conductive membranes provide a promising method to alleviate membrane fouling, but their cost-effective fabrication, which is urgently needed, is still a challenge. This paper describes the facile fabrication of an ultrafiltration conductive polypyrrole (PPy)-modified membrane (PMM) by in situ chemical polymerization ...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2020.129416

    authors: Sun J,Wang G,Zhang H,Zhang B,Hu C

    更新日期:2020-12-26 00:00:00

  • Electrochemical analysis of naproxen in water using poly(l-serine)-modified glassy carbon electrode.

    abstract::A poly(l-serine)-modified glassy carbon electrode (PLS/GCE) was fabricated by electropolymerization and used to study the detection of naproxen (NPX), a representative non-steroidal anti-inflammatory drug, in phosphate buffer supporting electrolyte at pH 5.0. Results indicated that the PLS/GCE was capable of determina...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2020.126686

    authors: Hung CM,Huang CP,Chen SK,Chen CW,Dong CD

    更新日期:2020-09-01 00:00:00

  • Comprehensive assessment of heavy metal pollution in topsoil of historical urban park on an example of the Planty Park in Krakow (Poland).

    abstract::The Historic Centre of Krakow is on the UNESCO World Heritage List and includes the Main Market Square, which is surrounded by the historical Planty Park. Soils in the Planty Park are an example of a green area in an urban environment that is particularly exposed to heavy metal-rich pollution. To assess the relative c...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2017.03.106

    authors: Gąsiorek M,Kowalska J,Mazurek R,Pająk M

    更新日期:2017-07-01 00:00:00

  • NIR spectroscopy as a tool for discriminating between lichens exposed to air pollution.

    abstract::Lichens are used as biomonitors of air pollution because they are extremely sensitive to the presence of substances that alter atmospheric composition. Fifty-one thalli of two different varieties of Pseudevernia furfuracea (var. furfuracea and var. ceratea) were collected far from local sources of air pollution. Twent...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2015.03.095

    authors: Casale M,Bagnasco L,Giordani P,Mariotti MG,Malaspina P

    更新日期:2015-09-01 00:00:00

  • Influence of soil type and environmental conditions on ZnO, TiO(2) and Ni nanoparticles phytotoxicity.

    abstract::Intensive development of nanotechnology will result in releasing nanoparticles (NPs) to the environment including soil. The objective of the study was the evaluation of phytotoxicity of inorganic nanoparticles and their bulk counterparts (ZnO, TiO(2) and Ni) in various soils using Phytotoxkit F™ method. The estimation...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2013.02.048

    authors: Jośko I,Oleszczuk P

    更新日期:2013-06-01 00:00:00

  • Chemical extraction of trace elements from hazardous fine fraction at an old glasswork dump.

    abstract::Old glassworks sites have been always associated with contamination by different trace elements like Pb, Cd, As, Zn and others. The mixture of soil and waste glass of particle sizes <2 mm at one of the oldest Swedish glassworks (the Pukeberg) was studied by analyzing the trace elements content, organic content (3.6%) ...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2017.12.142

    authors: Jani Y,Hogland W

    更新日期:2018-03-01 00:00:00

  • Assessing the distribution and human health risk of organochlorine pesticide residues in sediments from selected rivers.

    abstract::Sediment samples from major agricultural producing areas in Edo state Nigeria were analysed for α-HCH, γ-HCH, β-HCH and ∑DDT with the aim of elucidating contamination profiles, distribution characteristics, carcinogenic and non-carcinogenic risk of these compounds in these regions. Analysis was done using a gas chroma...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2015.09.108

    authors: Ogbeide O,Tongo I,Ezemonye L

    更新日期:2016-02-01 00:00:00

  • Field evolved resistance to pyrethroids, neonicotinoids, organophosphates and macrolides in Rhopalosiphum padi (Linnaeus) and Sitobion avenae (Fabricius) from China.

    abstract::Rhopalosiphum padi (Linnaeus) and Sitobion avenae (Fabricius) are the predominant pests coexisting on wheat plants. In this study, the susceptibilities of 29 R. padi and 30 S. avenae populations from 15 provinces in China to pyrethroids (beta-cypermethrin and bifenthrin), neonicotinoids (imidacloprid and thiamethoxam)...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2020.128747

    authors: Gong P,Li X,Gao H,Wang C,Li M,Zhang Y,Li X,Liu E,Zhu X

    更新日期:2020-10-27 00:00:00

  • Storage effect on the analysis of pharmaceuticals and personal care products in wastewater.

    abstract::In this study, the stability of 124 target analytes in influent and effluent wastewater samples during short-term (4°C) and long-term (-18°C) storage was assessed. The most common storage scenario was considered, in which samples were frozen immediately after sampling without any pre-treatment. During short-term stora...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2014.02.067

    authors: Fedorova G,Golovko O,Randak T,Grabic R

    更新日期:2014-09-01 00:00:00

  • Tetracycline degradation by Klebsiella sp. strain TR5: Proposed degradation pathway and possible genes involved.

    abstract::Microorganisms with high tetracycline (TC) degradation efficiencies are required for biological processes for TC-containing wastewater treatment. With multiple enrichment cultures, a TC-degrading strain TR5 was isolated from chicken manure mixture in a large broiler farm, which was identified as Klebsiella pneumoniae ...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2020.126729

    authors: Yin Z,Xia D,Shen M,Zhu D,Cai H,Wu M,Zhu Q,Kang Y

    更新日期:2020-08-01 00:00:00

  • Bioaccumulation and depuration of anthracene in Penaeus monodon (Fibricius) through food ingestion.

    abstract::Understanding on the bioaccumulation and depuration of PAHs (polycyclic aromatic hydrocarbons) in Penaeus monodon is important in seafood safety because it is one of the most popular seafood consumed worldwide. In this study, we used anthracene as the precursor compound for PAHs accumulation and depuration in the shri...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2011.03.059

    authors: Ong PT,Yong JC,Chin KY,Hii YS

    更新日期:2011-07-01 00:00:00

  • Concentrations and mass fluxes estimation of organochlorine pesticides in Three Gorges Reservoir with virtual organisms using in situ PRC-based sampling rate.

    abstract::Organochlorine pesticides (OCP) are widely distributed environmental pollutants. Due to their persistence and toxicity, it is important to know their fluxes and spatial and temporal distribution in the environment. In this study, a new procedure to estimate OCP concentration based on a set of performance reference com...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2015.10.007

    authors: Temoka C,Wang J,Bi Y,Deyerling D,Pfister G,Henkelmann B,Schramm KW

    更新日期:2016-02-01 00:00:00

  • Fate of selected neonicotinoid insecticides in soil-water systems: Current state of the art and knowledge gaps.

    abstract::The occurrence of emerging contaminants, such as: personal care products, medicines, pharmaceuticals, pesticides, and their transformation products in the environment is of concern for human health and aquatic ecosystems due to their high persistence, toxicity and potential to bioaccumulation. Among pesticides, the ma...

    journal_title:Chemosphere

    pub_type: 杂志文章,评审

    doi:10.1016/j.chemosphere.2020.126981

    authors: Pietrzak D,Kania J,Kmiecik E,Malina G,Wątor K

    更新日期:2020-09-01 00:00:00

  • Enhanced arsenite removal through surface-catalyzed oxidative coagulation treatment.

    abstract::Arsenic being a naturally-occurring groundwater contaminant is subject to stringent water quality regulations. Coagulation and adsorption are widely used methods to treat arsenic-contaminated water, however, these treatments have been reported to be less efficient for the removal of arsenite (As(III)) than arsenate (A...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2016.02.006

    authors: Li Y,Bland GD,Yan W

    更新日期:2016-05-01 00:00:00

  • Production and partial characterization of bioemulsifier from a chromium-resistant actinobacteria.

    abstract::Surface-active compounds such as synthetic emulsifiers have been used for several decades, both for the degradation of hydrocarbons and increasing desorption of soil-bound metals. However, due to their high toxicity, low degradability, and production costs unaffordable for use in larger ecosystems, synthetic emulsifie...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2012.08.002

    authors: Colin VL,Pereira CE,Villegas LB,Amoroso MJ,Abate CM

    更新日期:2013-01-01 00:00:00

  • Does dexamethasone affect hepatic CYP450 system of fish? Semi-static in-vivo experiment on juvenile rainbow trout.

    abstract::Effects of aquatic pollutants on fish are of increasing concern. Pharmaceutical-based contaminants are prioritized for further study in environmental risk assessment using several approaches. Dexamethasone (DEX) was one such contaminant recognised for its effect on fish health status. Thus, we carried out an in vivo e...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2015.06.031

    authors: Burkina V,Sakalli S,Rasmussen MK,Zamaratskaia G,Koba O,Thai GP,Grabic R,Randak T,Zlabek V

    更新日期:2015-11-01 00:00:00

  • Formation of haloacetic acids from different organic precursors in swimming pool water during chlorination.

    abstract::Haloacetic acids (HAAs) were reported to be the most abundant category of DBPs in swimming pool water. In this study, the formation of HAAs from different organic precursors in swimming pool water, including UV filters, human body fluids, and natural organic matter (NOM), during chlorination was examined, and the effe...

    journal_title:Chemosphere

    pub_type: 杂志文章

    doi:10.1016/j.chemosphere.2019.125793

    authors: Wang J,Gong T,Xian Q

    更新日期:2020-05-01 00:00:00