Short RNAs in tomato.

abstract：:The thermosensitive genic male sterile 5 (tms5) mutation causes thermosensitive genic male sterility in rice (Oryza sativa) through loss of RNase ZS1 function, which influences ubiquitin fusion ribosomal protein L40 (UbL40 ) messenger RNA levels during male development. Here, we used ATAC-seq, combined with analysis o...

journal_title：Journal of integrative plant biology

authors： Jin J,Gui S,Li Q,Wang Y,Zhang H,Zhu Z,Chen H,Sun Y,Zou Y,Huang X,Ding Y

更新日期：2020-07-01 00:00:00

abstract：:A striking characteristic of plant cells is that their organelles can move rapidly through the cell. This movement, commonly referred to as cytoplasmic streaming, has been observed for over 200 years, but we are only now beginning to decipher the mechanisms responsible for it. The identification of the myosin motor pr...

journal_title：Journal of integrative plant biology

authors： Vick JK,Nebenführ A

更新日期：2012-11-01 00:00:00

abstract：:The eukaryotic actin cytoskeleton is required for numerous cellular processes, including cell shape, development and movement, gene expression and signal transduction, and response to biotic and abiotic stress. In recent years, research in both plants and animal systems have described a function for actin as the ideal...

journal_title：Journal of integrative plant biology

authors： Porter K,Day B

更新日期：2016-04-01 00:00:00

abstract：:The overall goal of this work was to develop a saccharification method for the production of third generation biofuel (i.e. bioethanol) using feedstock of the invasive marine macroalga Gracilaria salicornia. Under optimum conditions (120 °C and 2% sulfuric acid for 30 min), dilute acid hydrolysis of the homogenized in...

journal_title：Journal of integrative plant biology

authors： Wang X,Liu X,Wang G

更新日期：2011-03-01 00:00:00

abstract：:Interactions between plants and microbes result in plant disease and symbiosis. The former causes considerable economic damage in modern agriculture, while the latter has produced great beneficial effects to our agriculture system. Comparison of the two interactions has revealed that a common panel of signaling pathwa...

journal_title：Journal of integrative plant biology

authors： Zhao S,Qi X

更新日期：2008-07-01 00:00:00

abstract：:Pentatricopeptide repeat (PPR) proteins, characterized by tandem arrays of a 35 amino acid motif, have been suggested to play central and broad roles in modulating the expression of organelle genes in plants. However, the molecular mechanisms of most rice PPR genes remains unclear. In this paper, we isolated and chara...

journal_title：Journal of integrative plant biology

authors： Gong X,Su Q,Lin D,Jiang Q,Xu J,Zhang J,Teng S,Dong Y

更新日期：2014-04-01 00:00:00

abstract：:Plants depend on gravity to provide the constant landmark for downward root growth and upward shoot growth. The phytohormone auxin and its cell-to-cell transport machinery are central determinants ensuring gravitropic growth. Statolith sedimentation toward gravity is sensed in specialized cells. This positional cue is...

journal_title：Journal of integrative plant biology

authors： Waidmann S,Kleine-Vehn J

更新日期：2020-07-01 00:00:00

abstract：:The plant hormone auxin plays a crucial role in lateral root development. To better understand the molecular mechanisms underlying lateral root formation, an auxin-responsive gene OsCYP2 (Os02g0121300) was characterized from rice. Compared to the wild type, OsCYP2-RNAi (RNA interference) lines exhibited distinctive de...

journal_title：Journal of integrative plant biology

authors： Cui P,Liu H,Ruan S,Ali B,Gill RA,Ma H,Zheng Z,Zhou W

更新日期：2017-07-01 00:00:00

abstract：:The proteome of the Arabidopsis flower has not been extensively studied previously. Here, we report a proteomic analysis of the wild type Arabidopsis flower. Using both two-dimensional electrophoresis/mass spectrometry (2-DGE/MS) and multi-dimensional protein identification technology (MudPIT) approaches, we identifie...

journal_title：Journal of integrative plant biology

authors： Feng B,Li L,Zhou X,Stanley B,Ma H

更新日期：2009-02-01 00:00:00

abstract：:A potential mechanism to enhance utilization of sparingly soluble forms of phosphorus (P) is the root secretion of malate, which is mainly mediated by the ALMT gene family in plants. In this study, a total of 34 GmALMT genes were identified in the soybean genome. Expression patterns diverged considerably among GmALMTs...

journal_title：Journal of integrative plant biology

authors： Peng W,Wu W,Peng J,Li J,Lin Y,Wang Y,Tian J,Sun L,Liang C,Liao H

更新日期：2018-03-01 00:00:00

abstract：:Spirulina platensis exposed to various selenium (Se) concentrations (0, 10, 20, 40, 80, 150, 175, 200, 250 mg/L) accumulated high amounts of Se in a dose- and time-dependent manner. Under low Se concentrations (

journal_title：Journal of integrative plant biology

authors： Chen TF,Zheng WJ,Wong YS,Yang F

更新日期：2008-01-01 00:00:00

abstract：:Fusarium head blight (FHB) caused by Fusarium graminearum Schwabe (teleomorph Gibberella zeae (Schw.) Perch) results in large yield losses in annual global wheat production. Although studies have identified a number of wheat FHB resistance genes, a deeper understanding of the mechanisms underlying host plant resistanc...

journal_title：Journal of integrative plant biology

authors： Su P,Zhao L,Li W,Zhao J,Yan J,Ma X,Li A,Wang H,Kong L

更新日期：2020-07-17 00:00:00

abstract：:Nuclear migration and positioning are crucial for the morphogenesis of plant cells. We addressed the potential role of nuclear positioning for polarity induction using an experimental system based on regenerating protoplasts, where the induction of a cell axis de novo can be followed by quantification of specific rege...

journal_title：Journal of integrative plant biology

authors： Brochhausen L,Maisch J,Nick P

更新日期：2016-09-01 00:00:00

abstract：:The advent of clustered regularly interspaced short palindromic repeat (CRISPR) has had a profound impact on plant biology, and crop improvement. In this review, we summarize the state-of-the-art development of CRISPR technologies and their applications in plants, from the initial introduction of random small indel (i...

journal_title：Journal of integrative plant biology

authors： Zhan X,Lu Y,Zhu JK,Botella JR

更新日期：2021-01-01 00:00:00

abstract：:Angiosperms integrate a multitude of endogenous and environmental signals to control floral development, thereby ensuring reproductive success. Here, we report the identification of AGAMOUS AND TERMINAL FLOWER (AGTFL), a novel regulator of floral development in Medicago truncatula. Mutation of AGTFL led to the transfo...

journal_title：Journal of integrative plant biology

authors： Zhu B,Li H,Hou Y,Zhang P,Xia X,Wang N,Wang H,Mysore KS,Wen J,Pei Y,Niu L,Lin H

更新日期：2019-08-01 00:00:00

abstract：:This commentary highlights the recent two studies which uncovered dynamic maize kernel RNA-seq transcriptomes from early seed development, storage filling to maturation, day by day, hour by hour. These two studies provide a 'maize kernel gene expression dictionary' that will be powerful for the future studies in seed ...

journal_title：Journal of integrative plant biology

authors： Li Q,Wu Y

更新日期：2020-07-01 00:00:00

abstract：:The phytohormone abscisic acid (ABA) plays crucial roles in plant development and plant responses to environmental stresses. Although ABA receptors and a minimal set of core molecular components have recently been discovered, understanding of the ABA signaling pathway is still far from complete. In this work, we chara...

journal_title：Journal of integrative plant biology

authors： Li Z,Kang J,Sui N,Liu D

更新日期：2012-03-01 00:00:00

abstract：:Abscission is the process by which plants discard organs in response to environmental cues/stressors, or as part of their normal development. Abscission has been studied throughout the history of the plant sciences and in numerous species. Although long studied at the anatomical and physiological levels, abscission ha...

journal_title：Journal of integrative plant biology

authors： Niederhuth CE,Cho SK,Seitz K,Walker JC

更新日期：2013-12-01 00:00:00

abstract：:Understanding plant resistance to pathogenic microbes requires detailed information on the molecular mechanisms controlling the execution of plant innate immune responses. A growing body of evidence places phosphoinositide-specific phospholipase C (PI-PLC) enzymes immediately downstream of activated immune receptors, ...

journal_title：Journal of integrative plant biology

authors： Abd-El-Haliem AM,Joosten MH

更新日期：2017-03-01 00:00:00

abstract：:Transgenic soybean plants overexpressing the Arabidopsis purple acid phosphatase gene AtPAP15 (OXp) or the soybean expansin gene GmEXPB2 (OXe) can improve phosphorous (P) efficiency in pure culture by increasing Apase secretion or changing root morphology. In this study, soybean-soybean mixed cultures were employed to...

journal_title：Journal of integrative plant biology

authors： Xie J,Zhou J,Wang X,Liao H

更新日期：2015-05-01 00:00:00

abstract：:Being sessile organisms, plants evolved an unparalleled plasticity in their post-embryonic development, allowing them to adapt and fine-tune their vital parameters to an ever-changing environment. Crosstalk between plants and their environment requires tight regulation of information exchange at the plasma membrane (P...

journal_title：Journal of integrative plant biology

authors： Korbei B,Luschnig C

更新日期：2013-09-01 00:00:00

abstract：:2,4-Dichlorophenoxyacetic acid (2,4-D) was the first synthetic herbicide to be commercially developed and has commonly been used as a broadleaf herbicide for over 60 years. It is a selective herbicide that kills dicots without affecting monocots and mimics natural auxin at the molecular level. Physiological responses ...

journal_title：Journal of integrative plant biology

authors： Song Y

更新日期：2014-02-01 00:00:00

abstract：:The changes in external K+ concentration affect plant root growth. However, the molecular mechanism for perceiving a K+ signal to modulate root growth remains unknown. It is hypothesized that the K+ channel AKT1 is involved in low K+ sensing in the Arabidopsis root and subsequent regulation of root growth. Along with ...

journal_title：Journal of integrative plant biology

authors： Li J,Wu WH,Wang Y

更新日期：2017-12-01 00:00:00

abstract：:Plant thioglucosidases are the only known S-glycosidases in the large superfamily of glycosidases. These enzymes evolved more recently and are distributed mainly in Brassicales. Thioglucosidase research has focused mainly on the cruciferous crops due to their economic importance and cancer preventive benefits. In this...

journal_title：Journal of integrative plant biology

authors： Nong H,Zhang JM,Li DQ,Wang M,Sun XP,Zhu YJ,Meijer J,Wang QH

更新日期：2010-10-01 00:00:00

abstract：:In anther development, tapetal cells take part in complex processes, including endomitosis and apoptosis (programmed cell death). The tapetum provides many of the proteins, lipids, polysaccharides and other molecules necessary for pollen development. Several transcription factors, including DYT1, TDF1, AMS, MS188 and ...

journal_title：Journal of integrative plant biology

authors： Zhu J,Lou Y,Xu X,Yang ZN

更新日期：2011-11-01 00:00:00

abstract：:Plants have evolved a large number of transcription factors (TF), which are enriched among duplicate genes, highlighting their roles in complex regulatory networks. The APETALA2/EREBP-like genes constitute a large plant TF family and participate in development and stress responses. To probe the conservation and diverg...

journal_title：Journal of integrative plant biology

authors： Zeng L,Yin Y,You C,Pan Q,Xu D,Jin T,Zhang B,Ma H

更新日期：2016-06-01 00:00:00

abstract：:We developed simplified single transcriptional unit (SSTU) CRISPR systems for multiplex gene editing in rice using FnCpf1, LbCpf1 or Cas9, in which the nuclease and its crRNA array are co-expressed from a single Pol II promoter, without any additional processing machinery. Our SSTU systems are easy to construct and ef...

journal_title：Journal of integrative plant biology

authors： Wang M,Mao Y,Lu Y,Wang Z,Tao X,Zhu JK

更新日期：2018-08-01 00:00:00

abstract：:Gene expression in chloroplasts is regulated by many nuclear-encoded proteins. In this study, we isolated a rice (Oryza sativa subsp. japonica) mutant osotp51 with significant reduction in photosystem I (PSI). The osotp51 is extremely sensitive to light and accumulates a higher level of reactive oxygen species. Its le...

journal_title：Journal of integrative plant biology

authors： Ye JW,Gong ZY,Chen CG,Mi HL,Chen GY

更新日期：2012-02-01 00:00:00

abstract：:Plants utilize plasma membrane-localized receptor-like kinases (RLKs) to sense extracellular signals to coordinate growth, development, and innate immune responses. BAK1 regulates multiple signaling pathways acting as a co-receptor of several distinct ligand-binding RLKs. It has been debated whether BAK1 serves as an ...

journal_title：Journal of integrative plant biology

authors： He K,Xu S,Li J

更新日期：2013-12-01 00:00:00

abstract：:During daylight, plants produce excess photosynthates, including sucrose, which is temporarily stored in the vacuole. At night, plants remobilize sucrose to sustain metabolism and growth. Based on homology to other sucrose transporter (SUT) proteins, we hypothesized the maize (Zea mays) SUCROSE TRANSPORTER2 (ZmSUT2) p...

journal_title：Journal of integrative plant biology

authors： Leach KA,Tran TM,Slewinski TL,Meeley RB,Braun DM

更新日期：2017-06-01 00:00:00