Abstract:
:The thermosensitive genic male sterile 5 (tms5) mutation causes thermosensitive genic male sterility in rice (Oryza sativa) through loss of RNase ZS1 function, which influences ubiquitin fusion ribosomal protein L40 (UbL40 ) messenger RNA levels during male development. Here, we used ATAC-seq, combined with analysis of H3K9ac and H3K4me2, to identify changes in accessible chromatin during fertility conversion of the two-line hybrid rice Wuxiang S (WXS) derived from a mutant tms5 allele. Furthermore, RNA-seq and bioinformatic analyses identified specific transcription factors (TFs) in differentially accessible chromatin regions. Among these TFs, only GATA10 targeted UbL40 . Osgata10 knockout mutations, which resulted in low expression of UbL40 and a tendency toward male fertility, confirmed that GATA10 regulated fertility conversion via the modulation of UbL40 . Meanwhile, GATA10 acted as a mediator for interactions with ERF65, which revealed that transcriptional regulation is a complex process involving multiple complexes of TFs, namely TF modules. It appears that the ERF141/MADS7/MADS50/MYB modules affect metabolic processes that control anther and pollen development, especially cell wall formation. Our analysis revealed that these modules directly or indirectly affect metabolic pathway-related genes to coordinate plant growth with proper anther development, and furthermore, that GATA10 regulates fertility conversion via the modulation of UbL40 expression.
journal_name
J Integr Plant Bioljournal_title
Journal of integrative plant biologyauthors
Jin J,Gui S,Li Q,Wang Y,Zhang H,Zhu Z,Chen H,Sun Y,Zou Y,Huang X,Ding Ydoi
10.1111/jipb.12871subject
Has Abstractpub_date
2020-07-01 00:00:00pages
1034-1056issue
7eissn
1672-9072issn
1744-7909journal_volume
62pub_type
杂志文章abstract::Glutathione is an important antioxidant and has many important functions in plant development, growth and defense. Glutathione synthesis and degradation is highly compartment-specific and relies on the subcellular availability of its precursors, cysteine, glutamate, glycine and γ-glutamylcysteine especially in plastid...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/j.1744-7909.2011.01085.x
更新日期:2011-12-01 00:00:00
abstract::The conjugation of SUMO (small ubiquitin-like modifier) to protein substrates is a reversible process (SUMOylation/deSUMOylation) that regulates plant development and stress responses. The essential metal copper (Cu) is required for normal plant growth, but excess amounts are toxic. The SUMO E3 ligase, SIZ1, and SIZ1-...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12618
更新日期:2018-04-01 00:00:00
abstract::A striking characteristic of plant cells is that their organelles can move rapidly through the cell. This movement, commonly referred to as cytoplasmic streaming, has been observed for over 200 years, but we are only now beginning to decipher the mechanisms responsible for it. The identification of the myosin motor pr...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/j.1744-7909.2012.01180.x
更新日期:2012-11-01 00:00:00
abstract::The increased prevalence of high temperatures (HTs) around the world is a major global concern, as they dramatically affect agronomic productivity. Upon HT exposure, plants sense the temperature change and initiate cellular and metabolic responses that enable them to adapt to their new environmental conditions. Decodi...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/jipb.12701
更新日期:2018-09-01 00:00:00
abstract::Cell polarity plays an important role in a wide range of biological processes in plant growth and development. Cell polarity is manifested as the asymmetric distribution of molecules, for example, proteins and lipids, at the plasma membrane and/or inside of a cell. Here, we summarize a few polarized proteins that have...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/jipb.12904
更新日期:2020-01-01 00:00:00
abstract::During leaf organogenesis, a critical step for normal leaf primordium initiation is the repression of the class 1 KNOTTED1-like homeobox (KNOX) genes. After leaf primordia are formed, they must establish polarity for normal leaf morphogenesis. Recent studies have led to the identification of a number of genes that par...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/j.1744-7909.2008.00693.x
更新日期:2008-07-01 00:00:00
abstract::Starch is the major component in maize kernels, providing a stable carbohydrate source for humans and livestock as well as raw material for the biofuel industry. Increasing maize kernel starch content will help meet industry demands and has the potential to increase overall yields. We developed a pair of maize near-is...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12455
更新日期:2016-08-01 00:00:00
abstract::Plants have evolved intricate signaling cascades to rapidly and effectively respond to biotic and abiotic challenges. The precise timing of these responses enables optimal resource reallocation to maintain the balance between stress adaptation and growth. Thus, an in-depth understanding of the immediate and long-term ...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/jipb.12373
更新日期:2016-02-01 00:00:00
abstract::In order to explore the genetics of dark-induced senescence in winter wheat (Triticum aestivum L.), a quantitative trait loci (QTL) analysis was carried out in a doubled haploid population developed from a cross between the varieties Hanxuan 10 (HX) and Lumai 14 (LM). The senescence parameters chlorophyll content (Chl...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/j.1744-7909.2011.01088.x
更新日期:2012-01-01 00:00:00
abstract::With the enhancement of copper (Cu) stress, the germination percentage of wheat seeds decreased gradually. Pretreatment with sodium hydrosulfide (NaHS), hydrogen sulfide (H(2)S) donor alleviated the inhibitory effect of Cu stress in a dose-dependent manner; whereas little visible symptom was observed in germinating se...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/j.1744-7909.2008.00769.x
更新日期:2008-12-01 00:00:00
abstract::Dedifferentiation is a remarkable process that produces pluripotent stem cells from differentiated somatic cells to ensure developmental plasticity. Plants have evolved the ability of cellular dedifferentiation, and signaling cascades related to auxin and cytokinin-dependent callus formation have been extensively inve...
journal_title:Journal of integrative plant biology
pub_type: 信件
doi:10.1111/jipb.12560
更新日期:2017-10-01 00:00:00
abstract::Angiosperms integrate a multitude of endogenous and environmental signals to control floral development, thereby ensuring reproductive success. Here, we report the identification of AGAMOUS AND TERMINAL FLOWER (AGTFL), a novel regulator of floral development in Medicago truncatula. Mutation of AGTFL led to the transfo...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12799
更新日期:2019-08-01 00:00:00
abstract::Maize (Zea mays) root system architecture (RSA) mediates the key functions of plant anchorage and acquisition of nutrients and water. In this study, a set of 204 recombinant inbred lines (RILs) was derived from the widely adapted Chinese hybrid ZD958(Zheng58 × Chang7-2), genotyped by sequencing (GBS) and evaluated as ...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12452
更新日期:2016-03-01 00:00:00
abstract::Because Iron (Fe) is an essential element, Fe storage in plant seeds is necessary for seedling establishment following germination. However, the mechanisms controlling seed Fe storage during seed development remain largely unknown. Here we reveal that an ERF95 transcription factor regulates Arabidopsis seed Fe accumul...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12986
更新日期:2020-08-01 00:00:00
abstract::To understand the molecular responses of PC (Overexpressing the maize C4-pepc gene, which encodes phosphoenolpyruvate carboxylase (PEPC)), to drought stress at cell level, we analyzed changes in the levels of signaling molecules (hydrogen peroxide (H2O2), calcium ion (Ca(2+)), and nitric oxide (NO)) in suspension-cult...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12283
更新日期:2015-06-01 00:00:00
abstract::In order to investigate the relationship between the lipid composition in thylakoid membrane and thermostability of photosynthetic apparatus, tobacco transformed with sweet pepper sense glycerol-3-phosphate acyltransferase (GPAT) gene were used to analyze the lipid composition in thylakoid membrane, the net photosynth...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/j.1744-7909.2008.00652.x
更新日期:2008-05-01 00:00:00
abstract::Protein dephosphorylation mediated by protein phosphatases plays a major role in signal transduction of plant responses to environmental stresses. In this study, two putative protein phosphatases, PvPS2:1 and PvPS2:2 were identified and characterized in bean (Phaseolus vulgaris). The two PvPS2 members were found to be...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/j.1744-7909.2012.01126.x
更新日期:2012-06-01 00:00:00
abstract::The eukaryotic actin cytoskeleton is required for numerous cellular processes, including cell shape, development and movement, gene expression and signal transduction, and response to biotic and abiotic stress. In recent years, research in both plants and animal systems have described a function for actin as the ideal...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/jipb.12445
更新日期:2016-04-01 00:00:00
abstract::Responses of the photosynthetic activity of Phaeodactylum tricornutum (Bacillariophyta) to organic carbon glycerol were investigated. The growth rate, photosynthetic pigments, 77 K fluorescence spectra, and chloroplast ultrastructure of P. tricornutum were examined under photoautotrophic, mixotrophic, and photoheterot...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/j.1744-7909.2008.00767.x
更新日期:2009-03-01 00:00:00
abstract::Green Revolution made a substantial contribution to wheat yields worldwide in the 1960s and 1970s. It is of great importance to analyze the haplotype variation of Rht-D1, the Green Revolution gene, during wheat (Triticum aestivum L.) domestication and breeding to understand its evolution and function in wheat breeding...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12197
更新日期:2014-08-01 00:00:00
abstract::Heat stress is a major abiotic stress limiting plant growth and productivity in many areas of the world. Understanding mechanisms of plant adaptation to heat stress would facilitate the development of heat-tolerant cultivars for improving productivity in warm climatic regions. Protein metabolism involving protein synt...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/j.1744-7909.2008.00735.x
更新日期:2008-10-01 00:00:00
abstract::To effectively conserve sour orange (Citrus aurantium L.) germplasm on two islands at the estuary of the Yangtze River in China, we estimated genetic variation and relationships of the known parental trees and their proposed descendents (young trees) using the fingerprints of random amplified polymorphic DNA (RAPD). R...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/j.1744-7909.2008.00768.x
更新日期:2009-01-01 00:00:00
abstract::Interactions between plants and microbes result in plant disease and symbiosis. The former causes considerable economic damage in modern agriculture, while the latter has produced great beneficial effects to our agriculture system. Comparison of the two interactions has revealed that a common panel of signaling pathwa...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/j.1744-7909.2008.00702.x
更新日期:2008-07-01 00:00:00
abstract::The peel color of fruit is an important commercial trait in cucumber, but the underlying molecular basis is largely unknown. A mutant showing light green exocarp was discovered from ethyl methane sulfonate (EMS) mutagenized cucumber line 406 with dark green exocarp. Genetic analysis showed the mutant phenotype is conf...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12355
更新日期:2015-11-01 00:00:00
abstract::Class III secretable plant peroxidases occur as a large family of genes in plants with many functions and probable redundancy. In this review we are concentrating on the evidence we have on the catalysis of lignin polymerization by class III plant peroxidases present in the apoplastic space in the xylem of trees. Some...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/j.1744-7909.2010.00928.x
更新日期:2010-02-01 00:00:00
abstract::Studies that investigated the genetic basis of source and sink related traits have been widely conducted. However, the vascular system that links source and sink received much less attention. When maize was domesticated from its wild ancestor, teosinte, the external morphology has changed dramatically; however, less i...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12358
更新日期:2016-01-01 00:00:00
abstract::The small phenolic compound salicylic acid (SA) plays an important regulatory role in multiple physiological processes including plant immune response. Significant progress has been made during the past two decades in understanding the SA-mediated defense signaling network. Characterization of a number of genes functi...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/j.1744-7909.2011.01043.x
更新日期:2011-06-01 00:00:00
abstract::Variations in the trnK region of chloroplast DNA were investigated in the present study using polymerase chain reaction-restriction fragment length polymorphism to detect the genetic structure and to infer the possible glacial refugia of Ginkgo biloba L. in China. In total, 220 individuals from 12 populations in China...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/j.1744-7909.2007.00375.x
更新日期:2008-03-01 00:00:00
abstract::Both phototropins (phot1 and phot2) and cryptochromes (cry1 and cry2) were proven as the Arabidopsis thaliana blue light receptors. Phototropins predominately function in photomovement, and cryptochromes play a role in photomorphogenesis. Although cryptochromes have been proposed to serve as positive modulators of pho...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章
doi:10.1111/jipb.12813
更新日期:2020-05-01 00:00:00
abstract::Short RNAs are 20-24 nucleotide long non-coding RNA molecules generated by one of the Dicer-like enzymes. They recognize specific RNA or DNA sequences and guide the RNA silencing complex to their targets leading to post-transcriptional or transcriptional gene silencing of the target. Most of our knowledge about short ...
journal_title:Journal of integrative plant biology
pub_type: 杂志文章,评审
doi:10.1111/j.1744-7909.2009.00871.x
更新日期:2010-04-01 00:00:00