Abstract:
:To obtain the correlation dimension and entropy from an experimental time series we derive estimators for these quantities together with expressions for their variances using a maximum likelihood approach. The validity of these expressions is supported by Monte Carlo simulations. We illustrate the use of the estimators with a local recording of atrial fibrillation obtained from a conscious dog.
journal_name
Bull Math Bioljournal_title
Bulletin of mathematical biologyauthors
Olofsen E,Degoede J,Heijungs Rdoi
10.1007/BF02458619subject
Has Abstractpub_date
1992-01-01 00:00:00pages
45-58issue
1eissn
0092-8240issn
1522-9602journal_volume
54pub_type
杂志文章abstract::The propagation of fire-diffuse-fire Ca(2+) waves through a three-dimensional rectangular domain is considered. The domain is infinite in extent in the direction of propagation but with lateral barriers to diffusion which contain Ca(2+) pumps. The Ca(2+) concentration profile due to the firing of a release site (spark...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1016/S0092-8240(03)00074-0
更新日期:2004-01-01 00:00:00
abstract::It has been recently observed that the dynamical properties of mass action systems arising from many models of biochemical reaction networks can be characterized by considering the corresponding properties of a related generalized mass action system. The correspondence process known as network translation in particula...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-015-0077-5
更新日期:2015-06-01 00:00:00
abstract::We develop a numerical method for estimating optimal parameters in a mathematical model of the within-host dynamics of malaria infection. The model consists of a quasilinear system of partial differential equations. Convergence theory for the computed parameters is provided. Following this analysis, we present several...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-011-9650-8
更新日期:2011-11-01 00:00:00
abstract::The fluorescent dye carboxyfluorescein diacetate succinimidyl ester (CFSE) classifies proliferating cell populations into groups according to the number of divisions each cell has undergone (i.e., its division class). The pulse labeling of cells with radioactive thymidine provides a means to determine the distribution...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-007-9239-4
更新日期:2008-01-01 00:00:00
abstract::Synaptic spines grow as a consequence of the formation of F-actin filaments at the spine head. The dynamics of F-actin in the spine head upon excitation of N-methy-D-aspartate (NMDA) receptors has recently been investigated experimentally, but there is no quantitative account of how these dynamic changes occur upon ac...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-010-9614-4
更新日期:2011-09-01 00:00:00
abstract::A rather complete model of the gluconeogenic pathway was used, with the known separate pools of mitochondrial and cytosolic oxalacetate, malate and aspartate. The fumarase, malate dehydrogenase and glutamate oxalacetate transaminase reactions were assumed to be isotopically actively reversible, but none at isotopic eq...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/BF02460783
更新日期:1995-07-01 00:00:00
abstract::We present a new symmetric model of the idiotypic immune network. The model specifies clones of B-lymphocytes and incorporates: (1) influx and decay of cells; (2) symmetric stimulatory and inhibitory idiotypic interactions; (3) an explicit affinity parameter (matrix); (4) external (i.e. non-idiotypic) antigens. Suppre...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/BF02458444
更新日期:1989-01-01 00:00:00
abstract::Premised on relatively simple assumptions, mathematical models like those of Monod, Pirt or Droop inadequately explain the complex transient behavior of microbial populations. In particular, these models fail to explain many aspects of the dynamics of a Tetrahymena pyriformis-Escherichia coli community. In this study ...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/BF02458309
更新日期:1996-03-01 00:00:00
abstract::The apoptotic caspase-3/8 feedback loop describes the core of the extrinsic pro-apoptotic signaling pathway, an essential part of apoptosis. Latter is a prototype of the programmed cell death, which enables organisms to remove damaged or infected cells. The reaction network of the caspase-3/8 feedback loop in a single...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-013-9892-8
更新日期:2013-11-01 00:00:00
abstract::Mathematical modeling is a powerful tool for unraveling the complexities of the molecular regulatory networks underlying all aspects of cell physiology. To support this claim, we review our experiences modeling the cyclin-dependent kinase (CDK) network that controls events of the eukaryotic cell cycle. The model was d...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-014-0009-9
更新日期:2015-05-01 00:00:00
abstract::We study Eigen's quasispecies model in the asymptotic regime where the length of the genotypes goes to [Formula: see text] and the mutation probability goes to 0. A limiting infinite system of differential equations is obtained. We prove convergence of trajectories, as well as convergence of the equilibrium solutions....
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-018-0420-8
更新日期:2018-07-01 00:00:00
abstract::The present paper studies a predator-prey fishery model which incorporates the independent harvesting strategies and nonlinear impact of an anthropogenic toxicant. Both fish populations are harvested with different harvesting efforts, and the cases for the presence and non-presence of harvesting effort are discussed. ...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-019-00627-8
更新日期:2019-07-01 00:00:00
abstract::In a companion paper (Lof et al., in Bull. Math. Biol., 2008), we describe a spatio-temporal model for insect behavior. This model includes chemical information for finding resources and conspecifics. As a model species, we used Drosophila melanogaster, because its behavior is documented comparatively well. We divide ...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-008-9329-y
更新日期:2008-10-01 00:00:00
abstract::Degradable scaffolds represent a promising solution for tissue engineering of damaged or degenerated articular cartilage which due to its avascular nature, is characterized by a low self-repair capacity. To estimate the articular cartilage regeneration process employing degradable scaffolds, we propose a mathematical ...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-013-9897-3
更新日期:2013-12-01 00:00:00
abstract::This paper is devoted to the investigation of the effects of periodic drug treatment on a standard within-host virus model. We first introduce the basic reproduction ratio for the model, and then show that the infection free equilibrium is globally asymptotically stable, and the disease eventually disappears if R0<1, ...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-013-9820-y
更新日期:2013-03-01 00:00:00
abstract::Many aquatic organisms detect the presence of moving objects in their environment, such as predators, by sensing the hydrodynamic disturbances the movements produce. The resultant water flow is readily detectable by stationary organisms, but free-swimming organisms are carried with the surrounding water and may not de...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-017-0368-0
更新日期:2018-01-01 00:00:00
abstract::In special coordinates (codon position-specific nucleotide frequencies), bacterial genomes form two straight lines in 9-dimensional space: one line for eubacterial genomes, another for archaeal genomes. All the 348 distinct bacterial genomes available in Genbank in April 2007, belong to these lines with high accuracy....
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-007-9229-6
更新日期:2007-10-01 00:00:00
abstract::This paper develops mathematical theory to determine the representativeness of clone libraries for various models, defined below in the text. In particular, the means and variances of fragment lengths and the mean of the length of a randomly selected fragment are determined, as well as the probability of the event tha...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1006/bulm.2001.0251
更新日期:2001-09-01 00:00:00
abstract::A previously investigated basic model (System B) for the study of signaling morphogen gradient formation that allows for reversible binding of morphogens (aka ligands) with signaling receptors, degradation of bound morphogens and diffusion of unbound morphogens is extended to include the effects of membrane-bound non-...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-006-9152-2
更新日期:2007-01-01 00:00:00
abstract::We study the global stability of a class of models for in-vivo virus dynamics that take into account the Cytotoxic T Lymphocyte immune response and display antigenic variation. This class includes a number of models that have been extensively used to model HIV dynamics. We show that models in this class are globally a...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-010-9543-2
更新日期:2011-03-01 00:00:00
abstract::A mathematical control model for the transmission dynamics of tuberculosis (TB) in South Korea is developed on the basis of the reported active-TB and relapse-TB incidence data. In this work, optimal control theory is used to propose optimal TB prevention and control strategy and rearrange the government TB budget for...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-014-9962-6
更新日期:2014-07-01 00:00:00
abstract::Hair loss in the autoimmune disease, alopecia areata (AA), is characterized by the appearance of circularly spreading alopecic lesions in seemingly healthy skin. The distinct spatial patterns of AA lesions form because the immune system attacks hair follicle cells that are in the process of producing hair shaft, catap...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-020-00707-0
更新日期:2020-02-24 00:00:00
abstract::This paper considers a model of foodwebs taking into account species extinction and invasion. We show that system stability depends not only on usual parameters (mortality rates, self-limitation coefficients, and resource abundances), but also on an additional parameter ("biodiversity potential"). The main result is a...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-016-0216-7
更新日期:2016-11-01 00:00:00
abstract::Many neurons in mammalian sensory systems exhibit On and Off responses when given appropriate excitatory and inhibitory stimuli. In some instances, such neurons can also exhibit a Mixed response where diminished On and Off responses are both present. In this manuscript, we present a simple single cell model for these ...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-008-9358-6
更新日期:2009-01-01 00:00:00
abstract::We introduce a mesoscopic scale chemotaxis model for traveling wave phenomena which is induced by food metric. The organisms of this simplified kinetic model have two discrete velocity modes, [Formula: see text] and a constant tumbling rate. The main feature of the model is that the speed of organisms is constant [For...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-016-0235-4
更新日期:2017-02-01 00:00:00
abstract::In this work, we present a pedagogical tumour growth example, in which we apply calibration and validation techniques to an uncertain, Gompertzian model of tumour spheroid growth. The key contribution of this article is the discussion and application of these methods (that are not commonly employed in the field of can...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-017-0258-5
更新日期:2017-04-01 00:00:00
abstract::We extend a spatially non-local cross-diffusion model of aggregation between multiple species with directed motion toward resource gradients to include many species and more general kinds of dispersal. We first consider diffusive instabilities, determining that for directed motion along fecundity gradients, the model ...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-020-00786-z
更新日期:2020-08-11 00:00:00
abstract::Body size of organisms spans 24 orders of magnitude, and metabolic rate and life span present comparable differences across species. This article shows that this variation can be explained in terms of evolutionary entropy, a statistical parameter which characterizes the robustness of a population, and describes the un...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-008-9382-6
更新日期:2009-05-01 00:00:00
abstract::In previous studies, we used a mathematical model of the thick ascending limb (TAL) to investigate nonlinearities in the tubuloglomerular feedback (TGF) loop. That model does not represent other segments of the nephron, the water, and NaCl transport along which may impact fluid flow rate and NaCl transport along the T...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1007/s11538-009-9436-4
更新日期:2010-01-01 00:00:00
abstract::In this paper we develop and extend a previous model of cell deformations, initially proposed to describe the dynamical behaviour of round-shaped cells such as keratinocytes or leukocytes, in order to take into account cell pseudopodial dynamics with large amplitude membrane deformations such as those observed in fibr...
journal_title:Bulletin of mathematical biology
pub_type: 杂志文章
doi:10.1016/j.bulm.2003.11.004
更新日期:2004-09-01 00:00:00