Simultaneous Analysis of 2D Echo Views for Left Atrial Segmentation and Disease Detection.

Abstract:

:We propose a joint information approach for automatic analysis of 2D echocardiography (echo) data. The approach combines a priori images, their segmentations and patient diagnostic information within a unified framework to determine various clinical parameters, such as cardiac chamber volumes, and cardiac disease labels. The main idea behind the approach is to employ joint Independent Component Analysis of both echo image intensity information and corresponding segmentation labels to generate models that jointly describe the image and label space of echo patients on multiple apical views, instead of independently. These models are then both used for segmentation and volume estimation of cardiac chambers such as the left atrium and for detecting pathological abnormalities such as mitral regurgitation. We validate the approach on a large cohort of echoes obtained from 6,993 studies. We report performance of the proposed approach in estimation of the left-atrium volume and detection of mitral-regurgitation severity. A correlation coefficient of 0.87 was achieved for volume estimation of the left atrium when compared to the clinical report. Moreover, we classified patients that suffer from moderate or severe mitral regurgitation with an average accuracy of 82%.

journal_name

IEEE Trans Med Imaging

authors

Allan G,Nouranian S,Tsang T,Seitel A,Mirian M,Jue J,Hawley D,Fleming S,Gin K,Swift J,Rohling R,Abolmaesumi P

doi

10.1109/TMI.2016.2593900

subject

Has Abstract

pub_date

2017-01-01 00:00:00

pages

40-50

issue

1

eissn

0278-0062

issn

1558-254X

journal_volume

36

pub_type

杂志文章
  • Reconstruction of SPECT images using generalized matrix inverses.

    abstract::Generalized matrix inverses are used to estimate source activity distributions from single photon emission computed tomography (SPECT) projection measurements. Image reconstructions for a numerical simulation and a clinical brain study are examined. The photon flux from the source region and photon detection by the ga...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.141640

    authors: Smith MF,Floyd CR,Jaszczak RJ,Coleman RE

    更新日期:1992-01-01 00:00:00

  • Constrained Fourier space method for compensation of missing data in emission computed tomography.

    abstract::A method is introduced to compensate for missing projection data that can result from gas between detectors or from malfunctioning detectors. This method uses constraints in the Fourier domain to estimate the missing data, thus completing the data set so that the filtered backprojection algorithm can be used to recons...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.3925

    authors: Karp JS,Muehllehner G,Lewitt RM

    更新日期:1988-01-01 00:00:00

  • Corrections to "Direct Patlak Reconstruction From Dynamic PET Data Using the Kernel Method With MRI Information Based on Structural Similarity".

    abstract::In the above paper [1], there are typos in Algorithm 1 table. The correct version of Algorithm 1 is given below. ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章,已发布勘误

    doi:10.1109/TMI.2018.2849798

    authors: Gong K,Cheng-Liao J,Wang G,Chen KT,Catana C,Qi J

    更新日期:2018-08-01 00:00:00

  • Anti-aliasing weighting functions for single-slice helical CT.

    abstract::Spatially variant longitudinal aliasing plagues most volumes reconstructed from single-slice helical computed tomography data, and its presence can degrade resolution and distort image structures. We have recently developed a Fourier-based approach to longitudinal interpolation in helical computed tomography that can,...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2002.803104

    authors: La Rivière PJ,Pan X

    更新日期:2002-08-01 00:00:00

  • Automatic recovery of the optic nervehead geometry in optical coherence tomography.

    abstract::Optical coherence tomography (OCT) uses retroreflected light to provide micrometer-resolution, cross-sectional scans of biological tissues. OCT's first application was in ophthalmic imaging where it has proven particularly useful in diagnosing, monitoring, and studying glaucoma. Diagnosing glaucoma is difficult and it...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2006.871417

    authors: Boyer KL,Herzog A,Roberts C

    更新日期:2006-05-01 00:00:00

  • Digital flashing tomosynthesis: a promising technique for angiocardiographic screening.

    abstract::A system for digital flashing tomosynthesis (DFTS) consists of four ECG-gated simultaneously flashed X-ray tubes, a 14-in image intensifier, a unit for digital subtraction angiography (DSA), a PC-hosted transputer network for three-dimensional (3-D) reconstruction as well as for quantitative coronary angiography and v...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.232261

    authors: Stiel GM,Stiel LG,Klotz E,Nienaber CA

    更新日期:1993-01-01 00:00:00

  • Fast LV motion estimation using subspace approximation techniques.

    abstract::Cardiac motion estimation is very important in understanding cardiac dynamics and in noninvasive diagnosis of heart disease. Magnetic resonance (MR) imaging tagging is a technique for measuring heart deformations. In cardiac tagged MR images, a set of dark lines are noninvasively encoded within myocardial tissue provi...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.929616

    authors: Wang YP,Chen Y,Amini AA

    更新日期:2001-06-01 00:00:00

  • Characterization of visually similar diffuse diseases from B-scan liver images using nonseparable wavelet transform.

    abstract::This paper describes a new approach for texture characterization, based on nonseparable wavelet decomposition, and its application for the discrimination of visually similar diffuse diseases of liver. The proposed feature-extraction algorithm applies nonseparable quincunx wavelet transform and uses energies of the tra...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.730399

    authors: Mojsilović A,Popović M,Marković S,Krstić M

    更新日期:1998-08-01 00:00:00

  • Motion-compensated and gated cone beam filtered back-projection for 3-D rotational X-ray angiography.

    abstract::This paper presents a method to reconstruct moving objects from cone beam X-ray projections acquired during a single rotational run using a given motion vector field. The method is applicable to voxel driven cone-beam filtered back-projection reconstruction approaches. Here, a formulation based on the algorithm of Fel...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/tmi.2006.876147

    authors: Schäfer D,Borgert J,Rasche V,Grass M

    更新日期:2006-07-01 00:00:00

  • Artifact trapping during time reversal photoacoustic imaging for acoustically heterogeneous media.

    abstract::Several different reconstruction algorithms have been proposed for photoacoustic tomography, most of which presuppose that the acoustic properties of the medium are constant and homogeneous. In practice, there are often unknown spatial variations in the acoustic properties, and these algorithms give, at best, only app...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2009.2032358

    authors: Cox BT,Treeby BE

    更新日期:2010-02-01 00:00:00

  • Neuron Segmentation With High-Level Biological Priors.

    abstract::We present a novel approach to the problem of neuron segmentation in image volumes acquired by an electron microscopy. Existing methods, such as agglomerative or correlation clustering, rely solely on boundary evidence and have problems where such an evidence is lacking (e.g., incomplete staining) or ambiguous (e.g., ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2017.2712360

    authors: Krasowski NE,Beier T,Knott GW,Kothe U,Hamprecht FA,Kreshuk A

    更新日期:2018-04-01 00:00:00

  • Multi-channel microstrip transceiver arrays using harmonics for high field MR imaging in humans.

    abstract::Radio-frequency (RF) transceiver array design using primary and higher order harmonics for in vivo parallel magnetic resonance imaging imaging (MRI) and spectroscopic imaging is proposed. The improved electromagnetic decoupling performance, unique magnetic field distributions and high-frequency operation capabilities ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2011.2166273

    authors: Wu B,Wang C,Lu J,Pang Y,Nelson SJ,Vigneron DB,Zhang X

    更新日期:2012-02-01 00:00:00

  • A method for modeling noise in medical images.

    abstract::We have developed a method to study the statistical properties of the noise found in various medical images. The method is specifically designed for types of noise with uncorrelated fluctuations. Such signal fluctuations generally originate in the physical processes of imaging rather than in the tissue textures. Vario...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2004.832656

    authors: Gravel P,Beaudoin G,De Guise JA

    更新日期:2004-10-01 00:00:00

  • Quantitative Susceptibility Mapping Using Structural Feature Based Collaborative Reconstruction (SFCR) in the Human Brain.

    abstract::The reconstruction of MR quantitative susceptibility mapping (QSM) from local phase measurements is an ill posed inverse problem and different regularization strategies incorporating a priori information extracted from magnitude and phase images have been proposed. However, the anatomy observed in magnitude and phase ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2016.2544958

    authors: Bao L,Li X,Cai C,Chen Z,van Zijl PC

    更新日期:2016-09-01 00:00:00

  • Keypoint Transfer for Fast Whole-Body Segmentation.

    abstract::We introduce an approach for image segmentation based on sparse correspondences between keypoints in testing and training images. Keypoints represent automatically identified distinctive image locations, where each keypoint correspondence suggests a transformation between images. We use these correspondences to transf...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2018.2851194

    authors: Wachinger C,Toews M,Langs G,Wells W,Golland P

    更新日期:2020-02-01 00:00:00

  • Volumetric texture segmentation by discriminant feature selection and multiresolution classification.

    abstract::In this paper, a multiresolution volumetric texture segmentation (M-VTS) algorithm is presented. The method extracts textural measurements from the Fourier domain of the data via subband filtering using an orientation pyramid (Wilson and Spann, 1988). A novel Bhattacharyya space, based on the Bhattacharyya distance, i...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2006.884637

    authors: Reyes Aldasoro CC,Bhalerao A

    更新日期:2007-01-01 00:00:00

  • An Enhanced SMART-RECON Algorithm for Time-Resolved C-Arm Cone-Beam CT Imaging.

    abstract::Temporal resolution in time-resolved cone-beam CT (TR-CBCT) imaging is often limited by the time needed to acquire a complete data set for image reconstruction. With the recent developments of performing nearly limited-view artifact-free reconstruction from data in a limited-view angle range and a prior image, tempora...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2019.2960720

    authors: Li Y,Garrett JW,Li K,Strother C,Chen GH

    更新日期:2020-06-01 00:00:00

  • Application of micro-computed tomography with iodine staining to cardiac imaging, segmentation, and computational model development.

    abstract::Micro-computed tomography (micro-CT) has been widely used to generate high-resolution 3-D tissue images from small animals nondestructively, especially for mineralized skeletal tissues. However, its application to the analysis of soft cardiovascular tissues has been limited by poor inter-tissue contrast. Recent ex viv...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2012.2209183

    authors: Aslanidi OV,Nikolaidou T,Zhao J,Smaill BH,Gilbert SH,Holden AV,Lowe T,Withers PJ,Stephenson RS,Jarvis JC,Hancox JC,Boyett MR,Zhang H

    更新日期:2013-01-01 00:00:00

  • Spherical Deformable U-Net: Application to Cortical Surface Parcellation and Development Prediction.

    abstract::Convolutional Neural Networks (CNNs) have achieved overwhelming success in learning-related problems for 2D/3D images in the Euclidean space. However, unlike in the Euclidean space, the shapes of many structures in medical imaging have an inherent spherical topology in a manifold space, e.g., the convoluted brain cort...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2021.3050072

    authors: Zhao F,Wu Z,Wang L,Lin W,Gilmore JH,Xia S,Shen D,Li G

    更新日期:2021-01-08 00:00:00

  • Simulation and Synthesis in Medical Imaging.

    abstract::This editorial introduces the Special Issue on Simulation and Synthesis in Medical Imaging. In this editorial, we define so-far ambiguous terms of simulation and synthesis in medical imaging. We also briefly discuss the synergistic importance of mechanistic (hypothesis-driven) and phenomenological (data-driven) models...

    journal_title:IEEE transactions on medical imaging

    pub_type: 社论

    doi:10.1109/TMI.2018.2800298

    authors: Frangi AF,Tsaftaris SA,Prince JL

    更新日期:2018-03-01 00:00:00

  • Multi-TI Arterial Spin Labeling MRI with Variable TR and Bolus Duration for Cerebral Blood Flow and Arterial Transit Time Mapping.

    abstract::Arterial spin labeling (ASL) is an MRI perfusion imaging method from which quantitative cerebral blood flow (CBF) can be calculated. We present a multi-TI ASL method (multi-TI integrated ASL) in which variable post-labeling delays and variable TRs are used to improve the estimation of arterial transit time (ATT) and C...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2015.2395257

    authors: Johnston ME,Lu K,Maldjian JA,Jung Y

    更新日期:2015-06-01 00:00:00

  • The effect of image distortion on 3-D reconstruction of coronary bypass grafts from angiographic views.

    abstract::Three-dimensional (3-D) reconstructions of coronary bypass grafts performed from X-ray angiographic images may become increasingly important for the investigation of damaging mechanical stresses imposed to these vessels by the cyclic movement of the heart. Contrary to what we had experienced with coronary arteries, ap...

    journal_title:IEEE transactions on medical imaging

    pub_type: 信件

    doi:10.1109/42.875203

    authors: Dorsaz PA,Dorsaz L,Doriot PA

    更新日期:2000-07-01 00:00:00

  • Progressive coding and transmission of digital diagnostic pictures.

    abstract::In radiology, as a result of the increased utilization of digital imaging modalities, such as computed tomography (CT) and magnetic resonance imaging (MRI), over a third of the images produced in a typical radiology department are currently in digital form, and this percentage is steadily increasing. Image compression...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.1986.4307750

    authors: Elnahas SE,Tzou KH,Cox JR,Hill RL,Jost R

    更新日期:1986-01-01 00:00:00

  • Voxel-guided morphometry ("VGM") and application to stroke.

    abstract::Monitoring of cerebral diseases associated with a change of morphology (e.g., stroke) requires unprecedented accuracy for quantification of its morphological progression for each voxel. The purpose of this paper is to provide a technique [voxel-guided morphometry (VGM)] to quantify macroscopic anatomical differences. ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2002.806571

    authors: Schormann T,Kraemer M

    更新日期:2003-01-01 00:00:00

  • An improved algorithm for 2-D translational motion artifact correction.

    abstract::The quality of magnetic resonance imaging systems has improved to the point that motion is a major limitation in many examinations. Translational motion in the imaging plane causes the phase of the data to be corrupted. An algorithm using computer post-processing is proposed to correct the phase of the data, and hence...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.108589

    authors: Medley M,Yan H,Rosenfeld D

    更新日期:1991-01-01 00:00:00

  • A new algorithm for border description of polarized light surface microscopic images of pigmented skin lesions.

    abstract::The aim of this study was to provide mathematical descriptors for the border of pigmented skin lesion images and to assess their efficacy for distinction among different lesion groups. New descriptors such as lesion slope and lesion slope regularity are introduced and mathematically defined. A new algorithm based on t...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2003.815901

    authors: Grana C,Pellacani G,Cucchiara R,Seidenari S

    更新日期:2003-08-01 00:00:00

  • A Tensor B-Spline Approach for Solving the Diffusion PDE With Application to Optical Diffusion Tomography.

    abstract::Optical Diffusion Tomography (ODT) is a modern non-invasive medical imaging modality which requires mathematical modelling of near-infrared light propagation in tissue. Solving the ODT forward problem equation accurately and efficiently is crucial. Typically, the forward problem is represented by a Diffusion PDE and i...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2016.2641500

    authors: Shulga D,Morozov O,Hunziker P

    更新日期:2017-04-01 00:00:00

  • Regionally adaptive histogram equalization of the chest.

    abstract::Advances in the area of digital chest radiography have resulted in the acquisition of high-quality images of the human chest. With these advances, there arises a genuine need for image processing algorithms specific to the chest, in order to fully exploit this digital technology. We have implemented the well-known tec...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.1987.4307791

    authors: Sherrier RH,Johnson GA

    更新日期:1987-01-01 00:00:00

  • Noise characterization of block-iterative reconstruction algorithms: II. Monte Carlo simulations.

    abstract::In Soares et al. (2000), the ensemble statistical properties of the rescaled block-iterative expectation-maximization (RBI-EM) reconstruction algorithm and rescaled block-iterative simultaneous multiplicative algebraic reconstruction technique (RBI-SMART) were derived. Included in this analysis were the special cases ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/tmi.2004.836876

    authors: Soares EJ,Glick SJ,Hoppin JW

    更新日期:2005-01-01 00:00:00

  • Breast tissue density quantification via digitized mammograms.

    abstract::Studies reported in the literature indicate that breast cancer risk is associated with mammographic densities. An objective, repeatable, and a quantitative measure of risk derived from mammographic densities will be of considerable use in recommending alternative screening paradigms and/or preventive measures. However...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.938247

    authors: Saha PK,Udupa JK,Conant EF,Chakraborty DP,Sullivan D

    更新日期:2001-08-01 00:00:00