Negative Plant-Soil Feedback Driven by Re-assemblage of the Rhizosphere Microbiome With the Growth of Panax notoginseng.

abstract：:Campylobacteriosis is the most frequently reported bacterial food-borne illness in the European Union and contaminated broiler meat is considered the most important source of infection in humans. The aim of the present study was to evaluate real-time PCR (qPCR) and digital PCR (dPCR) for quantification of Campylobacte...

journal_title：Frontiers in microbiology

authors： Papić B,Pate M,Henigman U,Zajc U,Gruntar I,Biasizzo M,Ocepek M,Kušar D

更新日期：2017-03-02 00:00:00

abstract：:Glucuronoyl esterases are a novel type of enzymes believed to catalyze the hydrolysis of ester linkages between lignin and glucuronoxylan in lignocellulosic biomass, linkages known as lignin carbohydrate complexes. These complexes contribute to the recalcitrance of lignocellulose. Glucuronoyl esterases are a part of t...

journal_title：Frontiers in microbiology

authors： Agger JW,Busk PK,Pilgaard B,Meyer AS,Lange L

更新日期：2017-02-28 00:00:00

abstract：:The four serotypes of dengue virus (DENV) are the leading cause of arboviral diseases in humans. Decades of efforts have made remarkable progress in dengue vaccine development. Despite the first dengue vaccine (dengvaxia from Sanofi Pasteur), a live-attenuated tetravalent chimeric yellow fever-dengue vaccine, has been...

journal_title：Frontiers in microbiology

authors： Tsai WY,Lin HE,Wang WK

更新日期：2017-07-20 00:00:00

abstract：:In some filamentous fungi, the pathways related to the oxidative stress and oxylipins production are involved both in the process of host-recognition and in the pathogenic phase. In fact, recent studies have shown that the production of oxylipins in filamentous fungi, yeasts and chromists is also related to the develo...

journal_title：Frontiers in microbiology

authors： Scarpari M,Punelli M,Scala V,Zaccaria M,Nobili C,Ludovici M,Camera E,Fabbri AA,Reverberi M,Fanelli C

更新日期：2014-02-27 00:00:00

abstract：:Cyanobacteria are major primary producers in the polar and alpine regions contributing significantly to nitrogen and carbon cycles in the cryosphere. Recent advancements in environmental sequencing techniques have revealed great molecular diversity of microorganisms in cold environments. However, there are no comprehe...

journal_title：Frontiers in microbiology

authors： Chrismas NA,Anesio AM,Sánchez-Baracaldo P

更新日期：2015-10-13 00:00:00

abstract：:Pullulanase plays an important role as a starch hydrolysis enzyme in the production of bio-fuels and animal feed, and in the food industry. Compared to the methods currently used for pullulanase production, synthesis by Bacillus subtilis would be safer and easier. However, the current yield of pullulanase from B. subt...

journal_title：Frontiers in microbiology

authors： Meng F,Zhu X,Nie T,Lu F,Bie X,Lu Y,Trouth F,Lu Z

更新日期：2018-11-02 00:00:00

abstract：:Traditionally, the shelf-life and safety of foods have been achieved by thermal processing. Low temperature long time and high temperature short time treatments are the most commonly used hurdles for the pasteurization of fluid foods and raw materials. However, the thermal treatments can reduce the product quality and...

journal_title：Frontiers in microbiology

authors： Patrignani F,Lanciotti R

更新日期：2016-08-03 00:00:00

abstract：BACKGROUND:Tyrophagus putrescentiae colonizes different human-related habitats and feeds on various post-harvest foods. The microbiota acquired by these mites can influence the nutritional plasticity in different populations. We compared the bacterial communities of five populations of T. putrescentiae and one mixed po...

journal_title：Frontiers in microbiology

authors： Erban T,Klimov PB,Smrz J,Phillips TW,Nesvorna M,Kopecky J,Hubert J

更新日期：2016-07-12 00:00:00

abstract：:Photo-receptors are widely present in both prokaryotic and eukaryotic cells, which serves as the foundation of tuning cell behaviors with light. While practices in eukaryotic cells have been relatively established, trials in bacterial cells have only been emerging in the past few years. A number of light sensors have ...

journal_title：Frontiers in microbiology

authors： Liu Z,Zhang J,Jin J,Geng Z,Qi Q,Liang Q

更新日期：2018-11-08 00:00:00

abstract：:MicroRNAs (miRNAs) are a group of small non-coding endogenous RNAs. In plants, miRNAs play vital functions in regulating growth, development, and stress response. However, the role of miRNAs in Arabidopsis-Phytophthora capsici (P. capsici) model pathosystem is poorly understood. Here, we used a high-throughput sequenc...

journal_title：Frontiers in microbiology

authors： Zhu X,He S,Fang D,Guo L,Zhou X,Guo Y,Gao L,Qiao Y

更新日期：2020-06-23 00:00:00

abstract：:Foodborne diseases (FBDs) are infections of the gastrointestinal tract caused by foodborne pathogens (FBPs) such as bacteria [Salmonella, Listeria monocytogenes and Shiga toxin-producing E. coli (STEC)] and several viruses, but also parasites and some fungi. Artificial intelligence (AI) and its sub-discipline machine ...

journal_title：Frontiers in microbiology

authors： Vilne B,Meistere I,Grantiņa-Ieviņa L,Ķibilds J

更新日期：2019-08-06 00:00:00

abstract：:Internal bacterial concentration of Mg2+, the most abundant divalent cation in living cells, is estimated to be in the single millimolar range. However, many bacteria will thrive in media with only micromolars of Mg2+, by using a range of intensely studied and highly efficient import mechanisms, as well as in media wi...

journal_title：Frontiers in microbiology

authors： Armitano J,Redder P,Guimarães VA,Linder P

更新日期：2016-11-25 00:00:00

abstract：:Traditionally, chemical agents such as formalin (FA) and β-propiolactone (BPL) have long been used for the preparation of inactivated vaccines or toxoids. It has been shown that FA extensively modifies vaccine antigens and thus affects immunogenicity profiles, sometimes compromising the protective efficacy of the vacc...

journal_title：Frontiers in microbiology

authors： Lee YH,Jang YH,Byun YH,Cheong Y,Kim P,Lee YJ,Lee YJ,Sung JM,Son A,Lee HM,Lee J,Yang SW,Song JM,Seong BL

更新日期：2017-12-12 00:00:00

abstract：:Alternaria is an important fungus to study due to their different life style from saprophytes to endophytes and a very successful fungal pathogen that causes diseases to a number of economically important crops. Alternaria species have been well-characterized for the production of different host-specific toxins (HSTs)...

journal_title：Frontiers in microbiology

authors： Meena M,Gupta SK,Swapnil P,Zehra A,Dubey MK,Upadhyay RS

更新日期：2017-08-08 00:00:00

abstract：:Candia tropicalis is an increasingly important human pathogen, causing nosocomial fungemia among patients with neutropenia or malignancy. However, limited research has been published concerning its pathogenicity. Based on the phenotypes of C. tropicalis in our previous study, we selected nine representative strains wi...

journal_title：Frontiers in microbiology

authors： Yu S,Li W,Liu X,Che J,Wu Y,Lu J

更新日期：2016-07-29 00:00:00

abstract：:The two main pillars of clinical microbiological diagnostics are the identification of potentially pathogenic microorganisms from patient samples and the testing for antibiotic susceptibility (AST) to allow efficient treatment with active antimicrobial agents. While routine microbial species identification is increasi...

journal_title：Frontiers in microbiology

authors： Welker M,van Belkum A

更新日期：2019-11-26 00:00:00

abstract：:Background: The gut microbiota is increasingly recognized as playing an important role in the development of obesity, but the influence of gender remains elusive. Using a large cohort of Chinese adults, our study aimed to identify differences in gut microbiota as a function of body mass index (BMI) and investigate gen...

journal_title：Frontiers in microbiology

authors： Gao X,Zhang M,Xue J,Huang J,Zhuang R,Zhou X,Zhang H,Fu Q,Hao Y

更新日期：2018-06-22 00:00:00

abstract：:Tumor-targeting bacteria elicit anticancer effects by infiltrating hypoxic regions, releasing toxic agents and inducing immune responses. Although current research has largely focused on the influence of chemical and immunological aspects on the mechanisms of bacterial therapy, the impact of physical effects is still ...

journal_title：Frontiers in microbiology

authors： Mascheroni P,Meyer-Hermann M,Hatzikirou H

更新日期：2020-06-04 00:00:00

abstract：:Autoimmune diseases are increasingly linked to aberrant gut microbiome and relevant metabolites. However, the association between vitiligo and the gut microbiome remains to be elucidated. Thus, we conducted a case-control study through 16S rRNA sequencing and serum untargeted-metabolomic profiling based on 30 vitiligo...

journal_title：Frontiers in microbiology

authors： Ni Q,Ye Z,Wang Y,Chen J,Zhang W,Ma C,Li K,Liu Y,Liu L,Han Z,Gao T,Jian Z,Li S,Li C

更新日期：2020-12-14 00:00:00

abstract：:Sulfate-reducing bacteria (SRB) and sulfur-oxidizing bacteria (SOB) have been studied extensively in marine sediments because of their vital roles in both sulfur and carbon cycles, but the available information regarding the highly diverse SRB and SOB communities is not comprehensive. High-throughput sequencing of fun...

journal_title：Frontiers in microbiology

authors： Zhang Y,Wang X,Zhen Y,Mi T,He H,Yu Z

更新日期：2017-11-07 00:00:00

abstract：:The changes of gastric microbiome across stages of neoplastic progression remain poorly understood, especially for intraepithelial neoplasia (IN) which has been recognized as a phenotypic bridge between atrophic/intestinal metaplastic lesions and invasive cancer. The gastric microbiota was investigated in 30 healthy c...

journal_title：Frontiers in microbiology

authors： Wang Z,Gao X,Zeng R,Wu Q,Sun H,Wu W,Zhang X,Sun G,Yan B,Wu L,Ren R,Guo M,Peng L,Yang Y

更新日期：2020-05-29 00:00:00

abstract：:Cellulolytic enzyme hydrolysis of lignocellulose biomass to release fermentable sugars is one of the key steps in biofuel refining. Gene expression of fungal cellulolytic enzymes is tightly controlled at the transcriptional level. Key transcription factors such as activator ClrB/CLR2 and XlnR/XYR1, as well as represso...

journal_title：Frontiers in microbiology

authors： Li Y,Zheng X,Zhang X,Bao L,Zhu Y,Qu Y,Zhao J,Qin Y

更新日期：2016-12-22 00:00:00

abstract：:The rumen contains a multi-kingdom, commensal microbiome, including protozoa, bacteria, archaea, fungi and viruses, which enables ruminant herbivores to ferment and utilize plant feedstuffs that would be otherwise indigestible. Within the rumen, virus populations are diverse and highly abundant, often out-numbering th...

journal_title：Frontiers in microbiology

authors： Gilbert RA,Townsend EM,Crew KS,Hitch TCA,Friedersdorff JCA,Creevey CJ,Pope PB,Ouwerkerk D,Jameson E

更新日期：2020-03-26 00:00:00

abstract：:Variation among animals in their host-associated microbial communities is increasingly recognized as a key determinant of important life history traits including growth, metabolism, and resistance to disease. Quantitative estimates of the factors shaping the stability of host microbiomes over time at the individual le...

journal_title：Frontiers in microbiology

authors： Harrison XA,Price SJ,Hopkins K,Leung WTM,Sergeant C,Garner TWJ

更新日期：2019-12-20 00:00:00

abstract：:Human endogenous retroviruses (ERVs) have been found to be associated with different diseases, e.g., multiple sclerosis (MS). Most human ERVs integrated in our genome are not competent to replicate and these sequences are presumably silent. However, transcription of human ERVs can be reactivated, e.g., by hypoxia. Int...

journal_title：Frontiers in microbiology

authors： Brütting C,Narasimhan H,Hoffmann F,Kornhuber ME,Staege MS,Emmer A

更新日期：2018-02-21 00:00:00

abstract：:Janthinobacterium and Duganella are well-known for their antifungal effects. Surprisingly, almost nothing is known on molecular aspects involved in the close bacterium-fungus interaction. To better understand this interaction, we established the genomes of 11 Janthinobacterium and Duganella isolates in combination wit...

journal_title：Frontiers in microbiology

authors： Haack FS,Poehlein A,Kröger C,Voigt CA,Piepenbring M,Bode HB,Daniel R,Schäfer W,Streit WR

更新日期：2016-10-26 00:00:00

abstract：:Cyanobacteria are fascinating photosynthetic prokaryotes that are regarded as the ancestors of the plant chloroplast; the purveyors of oxygen and biomass for the food chain; and promising cell factories for an environmentally friendly production of chemicals. In colonizing most waters and soils of our planet, cyanobac...

journal_title：Frontiers in microbiology

authors： Cassier-Chauvat C,Veaudor T,Chauvat F

更新日期：2016-11-09 00:00:00

abstract：:The aim of this study was to determine the role of an exopolysaccharide produced by natural dairy isolate Lactobacillus paracasei subsp. paracasei BGSJ2-8, in the adhesion to intestinal epithelial cells and a decrease in Escherichia coli's association with Caco-2 cells. Annotation of the BGSJ2-8 genome showed the pres...

journal_title：Frontiers in microbiology

authors： Živković M,Miljković MS,Ruas-Madiedo P,Markelić MB,Veljović K,Tolinački M,Soković S,Korać A,Golić N

更新日期：2016-03-09 00:00:00

abstract：:Two pools of individual single gene deletion (SGD) mutants of S. Typhimurium 14028s encompassing deletions of 3,923 annotated non-essential ORFs and sRNAs were screened by intraperitoneal (IP) injection in BALB/c mice followed by recovery from spleen and liver 2 days post infection. The relative abundance of each muta...

journal_title：Frontiers in microbiology

authors： Silva-Valenzuela CA,Molina-Quiroz RC,Desai P,Valenzuela C,Porwollik S,Zhao M,Hoffman RM,Andrews-Polymenis H,Contreras I,Santiviago CA,McClelland M

更新日期：2016-01-05 00:00:00

abstract：:Streptomyces clavuligerus F613-1 produces a clinically important β-lactamase inhibitor, clavulanic acid (CA). Although the biosynthesis pathway of CA has essentially been elucidated, the global regulatory mechanisms of CA biosynthesis remain unclear. The paired genes cagS and cagR, which are annotated, respectively, a...

journal_title：Frontiers in microbiology

authors： Fu J,Qin R,Zong G,Liu C,Kang N,Zhong C,Cao G

更新日期：2019-02-14 00:00:00