Identification of Genetic Variants via Bacterial Respiration Gas Analysis.

abstract：:Salmonella Enteritidis (SE) is a facultative intracellular pathogen that colonizes the chicken gut leading to contamination of carcasses during processing. A reduction in intestinal colonization by SE could result in reduced carcass contamination thereby reducing the risk of illnesses in humans. Short chain fatty acid...

journal_title：Frontiers in microbiology

authors： Gupta A,Bansal M,Wagle B,Sun X,Rath N,Donoghue A,Upadhyay A

更新日期：2020-09-16 00:00:00

abstract：:Toxoplasma gondii is responsible for causing toxoplasmosis, one of the most prevalent zoonotic parasitoses worldwide. The mechanisms that mediate T. gondii infection of pigs (the most common source of human infection) and renal tissues are still unknown. To identify the critical alterations that take place in the tran...

journal_title：Frontiers in microbiology

authors： Zhou CX,Elsheikha HM,Zhou DH,Liu Q,Zhu XQ,Suo X

更新日期：2016-05-13 00:00:00

abstract：:Whole genome sequencing (WGS) of Mycobacterium tuberculosis has been constructive in understanding its evolution, genetic diversity and the mechanisms involved in drug resistance. A large number of sequencing efforts from across the globe have revealed genetic diversity among clinical isolates and the genetic determin...

journal_title：Frontiers in microbiology

authors： Advani J,Verma R,Chatterjee O,Pachouri PK,Upadhyay P,Singh R,Yadav J,Naaz F,Ravikumar R,Buggi S,Suar M,Gupta UD,Pandey A,Chauhan DS,Tripathy SP,Gowda H,Prasad TSK

更新日期：2019-02-26 00:00:00

abstract：:Biosynthesis of nanoparticles (NPs) by microorganisms is a cost- and energy-effective approach. However, how the production of NPs affects the population of producing organism remains as an unresolved question. The present study aimed to evaluate the kinetics of Saccharomyces cerevisiae growth in relation to synthesis...

journal_title：Frontiers in microbiology

authors： Asghari-Paskiabi F,Imani M,Eybpoosh S,Rafii-Tabar H,Razzaghi-Abyaneh M

更新日期：2020-05-21 00:00:00

abstract：:Autoimmune diseases are increasingly linked to aberrant gut microbiome and relevant metabolites. However, the association between vitiligo and the gut microbiome remains to be elucidated. Thus, we conducted a case-control study through 16S rRNA sequencing and serum untargeted-metabolomic profiling based on 30 vitiligo...

journal_title：Frontiers in microbiology

authors： Ni Q,Ye Z,Wang Y,Chen J,Zhang W,Ma C,Li K,Liu Y,Liu L,Han Z,Gao T,Jian Z,Li S,Li C

更新日期：2020-12-14 00:00:00

abstract：:Fungi have increased tolerance to environmental stress (also related to the access of pollutants, e.g., trace elements and polycyclic aromatic hydrocarbons PAHs). The aim of the study was to evaluate the mycobiome and functional diversity of fungi in long-term crude-oil contaminated soils as the potential bioremediato...

journal_title：Frontiers in microbiology

authors： Gałązka A,Grządziel J,Gałązka R,Gawryjołek K,Ukalska-Jaruga A,Smreczak B

更新日期：2020-09-17 00:00:00

abstract：:Long-term dietary fatty acid intake is believed to induce changes in the human gut microbiome which might be associated with human health or obesity status; however, considerable debate remains regarding the most favorable ratios of fatty acids to optimize these processes. The objective of this sub-study of a double-b...

journal_title：Frontiers in microbiology

authors： Pu S,Khazanehei H,Jones PJ,Khafipour E

更新日期：2016-10-10 00:00:00

abstract：:The study of inorganic nutrients dynamics in shallow sediments usually focuses on two main pools: porewater (PW) nutrients and exchangeable (EX) ammonium and phosphate. Recently, it has been found that microphytobenthos (MPB) and other microorganisms can accumulate large amounts of nutrients intracellularly (IC), high...

journal_title：Frontiers in microbiology

authors： Garcia-Robledo E,Bohorquez J,Corzo A,Jimenez-Arias JL,Papaspyrou S

更新日期：2016-05-26 00:00:00

abstract：:Objectives: Sequence type 1193 is emerging as a new, virulent and resistant lineage among fluoroquinolone resistant Escherichia coli (FQrE. coli). In this study, we investigated the prevalence and molecular characteristics of this clone isolated from a Chinese university hospital. Methods: 73 phylogenetic group B2-FQr...

journal_title：Frontiers in microbiology

authors： Wu J,Lan F,Lu Y,He Q,Li B

更新日期：2017-11-21 00:00:00

abstract：:Diverse mobile genetic elements (MGEs) including plasmids, insertion sequences, and integrons play an important role in the occurrence and spread of multidrug resistance (MDR) in bacteria. It was found in previous studies that IS26 and class 1 integrons integrated on plasmids to speed the dissemination of antibiotic-r...

journal_title：Frontiers in microbiology

authors： Zhao H,Chen W,Xu X,Zhou X,Shi C

更新日期：2018-10-23 00:00:00

abstract：:Single molecule, real-time (SMRT) sequencing was used to characterize mitochondrial (mt) genome of Ophiocordyceps sinensis and to analyze the mt genome-wide pattern of epigenetic DNA modification. The complete mt genome of O. sinensis, with a size of 157,539 bp, is the fourth largest Ascomycota mt genome sequenced to ...

journal_title：Frontiers in microbiology

authors： Kang X,Hu L,Shen P,Li R,Liu D

更新日期：2017-07-27 00:00:00

abstract：:Candida species can cause severe infections associated with high morbidity and mortality. Therefore, it is essential to gain more insight into the anti-fungal host defense response. The advent of omics technology and development of advanced systems biology tools has permitted to approach this in an unbiased and quanti...

journal_title：Frontiers in microbiology

authors： Smeekens SP,van de Veerdonk FL,Netea MG

更新日期：2016-02-16 00:00:00

abstract：:Successful inter-kingdom relationships are based upon a dynamic balance between defense and cooperation. A certain degree of competition is necessary to guarantee life spread and development. On the other hand, cooperation is a powerful tool to ensure a long lasting adaptation to changing environmental conditions and ...

journal_title：Frontiers in microbiology

authors： Pessione E

更新日期：2020-10-20 00:00:00

abstract：:The cheese-derived strains Streptococcus thermophilus 84C isolated from Nostrano cheese, and Lactobacillus brevis DSM 32386 isolated from Traditional Mountain Malga cheese have been previously reported as γ-aminobutyric acid (GABA)-producers in vitro. In the present study, the ability of these strains to produce GABA ...

journal_title：Frontiers in microbiology

authors： Carafa I,Stocco G,Nardin T,Larcher R,Bittante G,Tuohy K,Franciosi E

更新日期：2019-02-13 00:00:00

abstract：:Many bacteria regulate gene expression in response to phosphate availability using a two-component signal transduction system, the activity of which is controlled by interaction with the Pst phosphate specific transporter and a cytoplasmic protein PhoU. Mycobacterium tuberculosis, the causative agent of tuberculosis, ...

journal_title：Frontiers in microbiology

authors： Brokaw AM,Eide BJ,Muradian M,Boster JM,Tischler AD

更新日期：2017-12-18 00:00:00

abstract：:Candida glabrata is an opportunistic fungal pathogen that currently ranks as the second most common cause of candidiasis. Although the mechanisms underlying virulence and drug resistance in C. glabrata are now starting to be elucidated, we still lack a good understanding of how this yeast adapts during the course of a...

journal_title：Frontiers in microbiology

authors： Carreté L,Ksiezopolska E,Gómez-Molero E,Angoulvant A,Bader O,Fairhead C,Gabaldón T

更新日期：2019-02-12 00:00:00

abstract：:The Asian citrus psyllid (ACP), Diaphorina citri (Kuwayama) (Hemiptera: Liviidae), is a notorious Rutaceae plant pest. Frequent and extensive use of pesticides has resulted in severe insecticide resistance in ACP populations. Fully understanding the mechanism of ACP resistance to pesticides is vital for us to control ...

journal_title：Frontiers in microbiology

authors： Yi T,Lei L,He L,Yi J,Li L,Dai L,Hong Y

更新日期：2020-12-16 00:00:00

abstract：:Halophilic archaea push the limits of life at several extremes. In particular, they are noted for their biochemical strategies in dealing with osmotic stress, low water activity and cycles of desiccation in their hypersaline environments. Another feature common to their habitats is intense ultraviolet (UV) radiation, ...

journal_title：Frontiers in microbiology

authors： Jones DL,Baxter BK

更新日期：2017-09-29 00:00:00

abstract：:There is a concerted understanding of the accumulation of soil pathogens as the major driving factor of negative plant-soil feedback (NPSF). However, our knowledge of the connection between plant growth, pathogen build-up and soil microbiome assemblage is limited. In this study, significant negative feedback between t...

journal_title：Frontiers in microbiology

authors： Luo L,Guo C,Wang L,Zhang J,Deng L,Luo K,Huang H,Liu Y,Mei X,Zhu S,Yang M

更新日期：2019-07-26 00:00:00

abstract：:Multiple studies confirm laccase role in fungal pathogenicity and lignocellulose degradation. In spite of broad genomic research, laccases from plant wilt pathogen Fusarium oxysporum are still not characterized. The study aimed to identify F. oxysporum genes that may encode laccases sensu stricto and to characterize t...

journal_title：Frontiers in microbiology

authors： Kwiatos N,Ryngajłło M,Bielecki S

更新日期：2015-09-10 00:00:00

abstract：:Arbuscular mycorrhizal fungi (AMF) are obligate root symbionts that can protect their host plant against biotic stress factors such as plant-parasitic nematode (PPN) infection. PPN consist of a wide range of species with different life styles that can cause major damage in many important crops worldwide. Various mecha...

journal_title：Frontiers in microbiology

authors： Schouteden N,De Waele D,Panis B,Vos CM

更新日期：2015-11-17 00:00:00

abstract：:The claimed role of gene reservoir of coagulase-negative staphylococci (CoNS) could be contradicted by estimates that CRISPR/Cas systems are found in the genomes of 40-50% of bacteria, as these systems interfere with plasmid uptake in staphylococci. To further correlate this role with presence of CRISPR, we analyzed, ...

journal_title：Frontiers in microbiology

authors： Rossi CC,Souza-Silva T,Araújo-Alves AV,Giambiagi-deMarval M

更新日期：2017-08-15 00:00:00

abstract：:The extensive use of daptomycin for treating complex methicillin-resistant Staphylococcus aureus infections has led to the emergence of daptomycin-resistant strains. Although genomic studies have identified mutations associated with daptomycin resistance, they have not necessarily provided insight into the evolution a...

journal_title：Frontiers in microbiology

authors： Lasek-Nesselquist E,Lu J,Schneider R,Ma Z,Russo V,Mishra S,Pai MP,Pata JD,McDonough KA,Malik M

更新日期：2019-02-28 00:00:00

abstract：:We introduce a manually constructed and curated regulatory network model that describes the current state of knowledge of transcriptional regulation of Bacillus subtilis. The model corresponds to an updated and enlarged version of the regulatory model of central metabolism originally proposed in 2008. We extended the ...

journal_title：Frontiers in microbiology

authors： Faria JP,Overbeek R,Taylor RC,Conrad N,Vonstein V,Goelzer A,Fromion V,Rocha M,Rocha I,Henry CS

更新日期：2016-03-18 00:00:00

abstract：:Carbapenem-resistant Acinetobacter baumannii (CRAB) are emerging worldwide. In South America, clinical isolates presenting such a phenotype usually do not belong to the globally distributed international clone 2 (IC2). The majority of these isolates are also resistant to multiple other antimicrobials and are often des...

journal_title：Frontiers in microbiology

authors： Nodari CS,Cayô R,Streling AP,Lei F,Wille J,Almeida MS,de Paula AI,Pignatari ACC,Seifert H,Higgins PG,Gales AC

更新日期：2020-11-30 00:00:00

abstract：:Schistosomiasis japonica is a significant health problem that leads to morbidity and mortality of humans. It is characterized by hepatic granulomatous response and fibrosis caused by eggs deposition in the liver. β-actin, a traditional housekeeping gene, is widely used as an internal control to normalize gene and prot...

journal_title：Frontiers in microbiology

authors： Zhang B,Wu X,Liu J,Song L,Song Q,Wang L,Yuan D,Wu Z

更新日期：2019-01-31 00:00:00

abstract：:DNA and RNA-based sequencing of the 16S rRNA gene and transcripts were used to assess the phylogenetic diversity of microbial communities at assets experiencing corrosion in an oil production facility. The complementary methodological approach, coupled with extensive bioinformatics analysis, allowed to visualize diffe...

journal_title：Frontiers in microbiology

authors： Salgar-Chaparro SJ,Machuca LL

更新日期：2019-11-07 00:00:00

abstract：:In recent years, cases of botulism in cattle and other farm animals and also in farmers increased dramatically. It was proposed, that these cases could be affiliated with the spreading of compost or other organic manures contaminated with Clostridium botulinum spores on farm land. Thus, soils and fodder plants and fin...

journal_title：Frontiers in microbiology

authors： Zeiller M,Rothballer M,Iwobi AN,Böhnel H,Gessler F,Hartmann A,Schmid M

更新日期：2015-10-31 00:00:00

abstract：:Marsupials diverged from eutherian mammals about 148 million years ago and represent a unique lineage of mammals with distinctive morphological and reproductive characteristics. Marsupials have significantly shorter gestation periods than eutherians. Pregnancy typically ranges from 15 to 35 days, with young being born...

journal_title：Frontiers in microbiology

authors： Cheng Y,Belov K

更新日期：2017-03-07 00:00:00

abstract：:Cheese microbiota contribute significantly to the final characteristics of cheeses due to the growth and interaction between cheese microorganisms during processing and ripening. For raw milk cheeses, such as Parmigiano Reggiano (PR), the microbiota derive from the raw milk itself, the dairy environment, and the start...

journal_title：Frontiers in microbiology

authors： Bottari B,Levante A,Bancalari E,Sforza S,Bottesini C,Prandi B,De Filippis F,Ercolini D,Nocetti M,Gatti M

更新日期：2020-10-02 00:00:00