Biotransformation of benzonitrile herbicides via the nitrile hydratase-amidase pathway in rhodococci.

Abstract:

:The aim of this work was to determine the ability of rhodococci to transform 3,5-dichloro-4-hydroxybenzonitrile (chloroxynil), 3,5-dibromo-4-hydroxybenzonitrile (bromoxynil), 3,5-diiodo-4-hydroxybenzonitrile (ioxynil) and 2,6-dichlorobenzonitrile (dichlobenil); to identify the products and determine their acute toxicities. Rhodococcus erythropolis A4 and Rhodococcus rhodochrous PA-34 converted benzonitrile herbicides into amides, but only the former strain was able to hydrolyze 2,6-dichlorobenzamide into 2,6-dichlorobenzoic acid, and produced also more of the carboxylic acids from the other herbicides compared to strain PA-34. Transformation of nitriles into amides decreased acute toxicities for chloroxynil and dichlobenil, but increased them for bromoxynil and ioxynil. The amides inhibited root growth in Lactuca sativa less than the nitriles but more than the acids. The conversion of the nitrile group may be the first step in the mineralization of benzonitrile herbicides but cannot be itself considered to be a detoxification.

authors

Veselá AB,Pelantová H,Sulc M,Macková M,Lovecká P,Thimová M,Pasquarelli F,Pičmanová M,Pátek M,Bhalla TC,Martínková L

doi

10.1007/s10295-012-1184-z

subject

Has Abstract

pub_date

2012-12-01 00:00:00

pages

1811-9

issue

12

eissn

1367-5435

issn

1476-5535

journal_volume

39

pub_type

杂志文章
  • Microarray analysis of p-anisaldehyde-induced transcriptome of Saccharomyces cerevisiae.

    abstract::p-Anisaldehyde (4-methoxybenzaldehyde), an extract from Pimpinella anisum L. seeds, is a potential novel preservative. To reveal the possible action mechanism of p-anisaldehyde against microorganisms, yeast-based commercial oligonucleotide microarrays were used to analyze the genome-wide transcriptional changes in res...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-009-0676-y

    authors: Yu L,Guo N,Yang Y,Wu X,Meng R,Fan J,Ge F,Wang X,Liu J,Deng X

    更新日期:2010-03-01 00:00:00

  • Isolation and characterization of endophytic huperzine A-producing fungi from Huperzia serrata.

    abstract::Huperzia serrata is a producer of huperzine A (HupA), a cholinesterase inhibitor (ChEI). Over 120 endophytic fungi were recovered from this plant and screened for Hup-A and nine were found. These nine represented seven different fungal genera with the most significant producer being Shiraia sp. A total of 127 endophyt...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-010-0905-4

    authors: Wang Y,Zeng QG,Zhang ZB,Yan RM,Wang LY,Zhu D

    更新日期:2011-09-01 00:00:00

  • Enteric virus contamination of foods through industrial practices: a primer on intervention strategies.

    abstract::Hepatitis A and E viruses, rotaviruses, Norwalk-like caliciviruses, and astroviruses are among the enteric viruses known to cause food- and waterborne illness. These viruses are spread by the fecal-oral route and are a major cause of morbidity and mortality worldwide. Foods may be contaminated at any time pre- or post...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章,评审

    doi:10.1038/sj.jim.7000095

    authors: Richards GP

    更新日期:2001-08-01 00:00:00

  • Characterization and comparative analysis of toxin-antitoxin systems in Acetobacter pasteurianus.

    abstract::Bacterial toxin-antitoxin (TA) systems play important roles in diverse cellular regulatory processes. Here, we characterize three putative type II TA candidates from Acetobacter pasteurianus and investigate the profile of type II TA systems in the genus Acetobacter. Based on the gene structure and activity detection, ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-019-02144-y

    authors: Xia K,Bao H,Zhang F,Linhardt RJ,Liang X

    更新日期:2019-06-01 00:00:00

  • Heterologous production of a new lasso peptide brevunsin in Sphingomonas subterranea.

    abstract::A shuttle vector pHSG396Sp was constructed to perform gene expression using Sphingomonas subterranea as a host. A new lasso peptide biosynthetic gene cluster, derived from Brevundimonas diminuta, was amplified by PCR and integrated to afford a expression vector pHSG396Sp-12697L. The new lasso peptide brevunsin was suc...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-018-2077-6

    authors: Kodani S,Hemmi H,Miyake Y,Kaweewan I,Nakagawa H

    更新日期:2018-11-01 00:00:00

  • Engineering of isoamylase: improvement of protein stability and catalytic efficiency through semi-rational design.

    abstract::Isoamylase catalyzes the hydrolysis of α-1,6-glycosidic linkages in glycogen, amylopectin and α/β-limit dextrins. A semi-rational design strategy was performed to improve catalytic properties of isoamylase from Bacillus lentus. Three residues in vicinity of the essential residues, Arg505, Asn513, and Gly608, were chos...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-015-1708-4

    authors: Li Y,Zhang L,Ding Z,Gu Z,Shi G

    更新日期:2016-01-01 00:00:00

  • Colonization of contaminated soil by an introduced bacterium: effects of initial pentachlorophenol levels on the survival of Sphingomonas chlorophenolica strain RA2.

    abstract::The survival of a Sphingomonas species that was introduced into pentachlorophenol (PCP)-contaminated soil was monitored with two complementary methods, a respiration-based assay and a most probable number (MPN) technique. Sphingomonas chlorophenolicastrain RA2 is a PCP-mineralizing bacterium that was introduced into s...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1038/sj.jim.2900718

    authors: Colores GM,Schmidt SK

    更新日期:1999-10-01 00:00:00

  • Enhancement of maltose utilisation by Saccharomyces cerevisiae in medium containing fermentable hexoses.

    abstract::Some industrial strains of Saccharomyces cerevisiae are unable to maintain high rates of fermentation during transition from catabolism of hexoses to maltose. This phenomenon, termed 'maltose lag', presents problems for the baking, brewing and distilling industries, which rely on yeast catabolism of mixtures of hexose...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1038/sj.jim.2900672

    authors: Hazell B,Attfield P

    更新日期:1999-06-01 00:00:00

  • Quantitative real-time PCR and fluorescence in situ hybridization approaches for enumerating Brevundimonas diminuta in drinking water.

    abstract::Brevundimonas diminuta is a small Gram-negative bacterium used for validation of membranes and filters used in the pharmaceutical and drinking water treatment industries. Current assays are time consuming, nonselective, and may be subject to interference by competing indigenous microorganisms. The focus of this study ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-010-0738-1

    authors: Donofrio RS,Bestervelt LL,Saha R,Bagley ST

    更新日期:2010-09-01 00:00:00

  • Optimization of culture conditions for the production of thermostable polygalacturonase by Penicillium SPC-F 20.

    abstract::Penicillium strain isolated from citrus fruit was found to produce thermostable polygalacturonases. Optimization of process parameters resulted in high levels of enzyme production after 3 days of incubation at a pH of 5.0 at 30 degrees C in the presence of 1% pectin. The optimum temperature for enzyme activity was 60 ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-008-0375-0

    authors: Mathew A,Eldo AN,Molly AG

    更新日期:2008-09-01 00:00:00

  • Linking species concepts to natural product discovery in the post-genomic era.

    abstract::A widely accepted species concept for bacteria has yet to be established. As a result, species designations are inconsistently applied and tied to what can be considered arbitrary metrics. Increasing access to DNA sequence data and clear evidence that bacterial genomes are dynamic entities that include large numbers o...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章,评审

    doi:10.1007/s10295-009-0683-z

    authors: Jensen PR

    更新日期:2010-03-01 00:00:00

  • Chemical improvement of chitosan-modified beads for the immobilization of Enterococcus faecium DBFIQ E36 L-arabinose isomerase through multipoint covalent attachment approach.

    abstract::D-tagatose is produced from D-galactose by the enzyme L-arabinose isomerase (L-AI) in a commercially viable bioprocess. An active and stable biocatalyst was obtained by modifying chitosan gel structure through reaction with TNBS, D-fructose or DMF, among others. This led to a significant improvement in L-AI immobiliza...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-015-1662-1

    authors: Manzo RM,de Sousa M,Fenoglio CL,Gonçalves LR,Mammarella EJ

    更新日期:2015-10-01 00:00:00

  • Enhancement of extracellular purine nucleoside accumulation by Bacillus strains through genetic modifications of genes involved in nucleoside export.

    abstract::Using a simple method to introduce genetic modifications into the chromosome of naturally nontransformable Bacillus, a set of marker-free inosine-producing and 5-aminoimidazole-4-carboxamide (AICA) ribonucleoside-producing Bacillus amyloliquefaciens strains has been constructed. These strains differ in expression leve...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-010-0829-z

    authors: Sheremet AS,Gronskiy SV,Akhmadyshin RA,Novikova AE,Livshits VA,Shakulov RS,Zakataeva NP

    更新日期:2011-01-01 00:00:00

  • The impact of Ivan Málek's continuous culture concept on bioprocessing.

    abstract::This paper summarizes research results and their industrial applications obtained by continuous culture in the former Czechoslovakia. Past achievements as well as recent trends and developments worldwide are presented. The term "Prague School of continuous culture" is put forward and its international activity is outl...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 历史文章,杂志文章

    doi:10.1007/s10295-010-0881-8

    authors: Kyslík P,Prokop A

    更新日期:2010-12-01 00:00:00

  • Production of a thermophilic maltooligosyl-trehalose synthase in Lactococcus lactis.

    abstract::The thermoacidophilic archaeon Sulfolobus solfataricus MT4 encodes a maltooligosyltrehalose synthase (MTS), that catalyzes an intramolecular transglycosylation process converting the glycosidic linkages at the reducing end of dextrins from alpha-1,4 into alpha-1,1. In this research the gene encoding MTS was cloned and...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-008-0384-z

    authors: Cimini D,De Rosa M,Panariello A,Morelli V,Schiraldi C

    更新日期:2008-10-01 00:00:00

  • Construction of a "nutrition supply-detoxification" coculture consortium for medium-chain-length polyhydroxyalkanoate production with a glucose-xylose mixture.

    abstract::In this study, we constructed a coculture consortium comprising engineered Pseudomonas putida KT2440 and Escherichia coli MG1655. Provision of "related" carbon sources and synthesis of medium-chain-length polyhydroxyalkanoates (mcl-PHAs) were separately assigned to these strains via a modular construction strategy. To...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-020-02267-7

    authors: Liu Y,Yang S,Jia X

    更新日期:2020-03-01 00:00:00

  • Use of a stress-minimisation paradigm in high cell density fed-batch Escherichia coli fermentations to optimise recombinant protein production.

    abstract::Production of recombinant proteins is an industrially important technique in the biopharmaceutical sector. Many recombinant proteins are problematic to generate in a soluble form in bacteria as they readily form insoluble inclusion bodies. Recombinant protein solubility can be enhanced by minimising stress imposed on ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-014-1489-1

    authors: Wyre C,Overton TW

    更新日期:2014-09-01 00:00:00

  • Biological deinking of inkjet-printed paper using Vibrio alginolyticus and its enzymes.

    abstract::Recycling of office waste paper (photocopy, inkjet, and laser prints) is a major problem due to difficulty in removal of nonimpact ink. Biological deinking of office waste paper is reported using several microorganisms and their enzymes. We report here deinking and decolorization of the dislodged ink particles from in...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-005-0017-8

    authors: Mohandass C,Raghukumar C

    更新日期:2005-09-01 00:00:00

  • The carboxylic acid reduction pathway in Nocardia. Purification and characterization of the aldehyde reductase.

    abstract::Whole cultures of Nocardia sp. NRRL 5646 reduce carboxylic acids, first to aldehydes, then to alcohols and subsequently to the corresponding acetyl esters. This work describes an NADPH-dependent reductase responsible for catalyzing the reduction of aldehyde intermediates, which was purified 3240-fold by a combination ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1038/sj.jim.7000096

    authors: Li T,Rosazza JP

    更新日期:2000-12-01 00:00:00

  • Solar Pond devices: free energy or bioreactors for Artemia biomass production?

    abstract::The recent exponential growth in industrial aquaculture has led to a huge increase in Artemia biomass production in order to meet increased fish production needs. The present study explores the potential use of salt gradient solar ponds (SGSPs) for production of Artemia nauplii. An SGSP is a basin of water where solar...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-009-0585-0

    authors: Gouveia L,Sousa J,Marques A,Tavares C,Giestas M

    更新日期:2009-08-01 00:00:00

  • Kinetic analysis on formation of poly(3-hydroxybutyrate) from acetic acid by Ralstonia eutropha under chemically defined conditions.

    abstract::Batch cultures of Ralstonia eutropha in chemically defined media with acetic acid (HAc) as the sole carbon source were conducted to investigate acetate utilization, formation of poly(3-hydroxybutyrate) (PHB) and growth of active biomass (ABM) under different carbon to nitrogen (C/N) weight ratios. The specific acetate...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1038/sj.jim.7000097

    authors: Wang J,Yu J

    更新日期:2001-03-01 00:00:00

  • Integrating enzyme evolution and high-throughput screening for efficient biosynthesis of L-DOPA.

    abstract::L-DOPA is a key pharmaceutical agent for treating Parkinson's, and market demand has exploded due to the aging population. There are several challenges associated with the chemical synthesis of L-DOPA, including complicated operation, harsh conditions, and serious pollution. A biocatalysis route for L-DOPA production ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-019-02237-8

    authors: Zeng W,Xu B,Du G,Chen J,Zhou J

    更新日期:2019-12-01 00:00:00

  • Optimization of process parameters for the production of carbonyl reductase by Candida viswanathii in a laboratory-scale fermentor.

    abstract::The effect of pH, aeration and mixing on the growth and production of carbonyl reductase by Candida viswanathii was investigated in a 6.6-l fermentor. Controlling the pH at 8.0 had a very significant effect on the enzyme production. Aeration and agitation influenced the dissolved oxygen concentration which in turn aff...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-007-0280-y

    authors: Soni P,Kansal H,Banerjee UC

    更新日期:2008-03-01 00:00:00

  • INDISIM-Denitrification, an individual-based model for study the denitrification process.

    abstract::Denitrification is one of the key processes of the global nitrogen (N) cycle driven by bacteria. It has been widely known for more than 100 years as a process by which the biogeochemical N-cycle is balanced. To study this process, we develop an individual-based model called INDISIM-Denitrification. The model embeds a ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-019-02245-8

    authors: Araujo-Granda P,Gras A,Ginovart M,Moulton V

    更新日期:2020-01-01 00:00:00

  • Ram horn peptone as a source of citric acid production by Aspergillus niger, with a process.

    abstract::The present study deals with the production of citric acid from a ram horn peptone (RHP) by Aspergillus niger NRRL 330. A medium from RHP and a control medium (CM) were compared for citric acid production using A. niger in a batch culture. For this purpose, first, RHP was produced. Ram horns were hydrolyzed by treatme...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-004-0147-4

    authors: Kurbanoglu EB,Kurbanoglu NI

    更新日期:2004-07-01 00:00:00

  • Yeast culture collections of the world: meeting the needs of industrial researchers.

    abstract::The importance of selecting optimal yeast strains for research or industrial applications is often underestimated. For example, utilizing a strain background that already provides the desired stress tolerance or nutrient utilization profile can eliminate costly strain optimization. Yeast culture collections can provid...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章,评审

    doi:10.1007/s10295-011-1078-5

    authors: Boundy-Mills K

    更新日期:2012-05-01 00:00:00

  • Lactobacillus casei as a biocatalyst for biofuel production.

    abstract::Microbial fermentation of sugars from plant biomass to alcohols represents an alternative to petroleum-based fuels. The optimal biocatalyst for such fermentations needs to overcome hurdles such as high concentrations of alcohols and toxic compounds. Lactic acid bacteria, especially lactobacilli, have high innate alcoh...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-016-1797-8

    authors: Vinay-Lara E,Wang S,Bai L,Phrommao E,Broadbent JR,Steele JL

    更新日期:2016-09-01 00:00:00

  • Natural products from anaerobes.

    abstract::Natural product discovery in the microbial world has historically been biased toward aerobes. Recent in silico analysis demonstrates that genomes of anaerobes encode unexpected biosynthetic potential for natural products, however, chemical data on natural products from the anaerobic world are extremely limited. Here, ...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章,评审

    doi:10.1007/s10295-018-2086-5

    authors: Li JS,Barber CC,Zhang W

    更新日期:2019-03-01 00:00:00

  • Effect of dissolved oxygen on L-methionine production from glycerol by Escherichia coli W3110BL using metabolic flux analysis method.

    abstract::L-Methionine is an essential amino acid in humans, which plays an important role in the synthesis of some important amino acids and proteins. In this work, metabolic flux of batch fermentation of L-methionine with recombinant Escherichia coli W3110BL was analyzed using the flux balance analysis method, which estimated...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-020-02264-w

    authors: Niu K,Xu YY,Wu WJ,Zhou HY,Liu ZQ,Zheng YG

    更新日期:2020-03-01 00:00:00

  • Construction of the astaxanthin biosynthetic pathway in a methanotrophic bacterium Methylomonas sp. strain 16a.

    abstract::Methylomonas sp. strain 16a is an obligate methanotrophic bacterium that uses methane or methanol as the sole carbon source. An effort was made to engineer this organism for astaxanthin production. Upon expressing the canthaxanthin gene cluster under the control of the native hps promoter in the chromosome, canthaxant...

    journal_title:Journal of industrial microbiology & biotechnology

    pub_type: 杂志文章

    doi:10.1007/s10295-006-0197-x

    authors: Ye RW,Yao H,Stead K,Wang T,Tao L,Cheng Q,Sharpe PL,Suh W,Nagel E,Arcilla D,Dragotta D,Miller ES

    更新日期:2007-04-01 00:00:00