Detecting cognitive impairment by eye movement analysis using automatic classification algorithms.

Abstract:

:The Visual Paired Comparison (VPC) task is a recognition memory test that has shown promise for the detection of memory impairments associated with mild cognitive impairment (MCI). Because patients with MCI often progress to Alzheimer's Disease (AD), the VPC may be useful in predicting the onset of AD. VPC uses noninvasive eye tracking to identify how subjects view novel and repeated visual stimuli. Healthy control subjects demonstrate memory for the repeated stimuli by spending more time looking at the novel images, i.e., novelty preference. Here, we report an application of machine learning methods from computer science to improve the accuracy of detecting MCI by modeling eye movement characteristics such as fixations, saccades, and re-fixations during the VPC task. These characteristics are represented as features provided to automatic classification algorithms such as Support Vector Machines (SVMs). Using the SVM classification algorithm, in tandem with modeling the patterns of fixations, saccade orientation, and regression patterns, our algorithm was able to automatically distinguish age-matched normal control subjects from MCI subjects with 87% accuracy, 97% sensitivity and 77% specificity, compared to the best available classification performance of 67% accuracy, 60% sensitivity, and 73% specificity when using only the novelty preference information. These results demonstrate the effectiveness of applying machine-learning techniques to the detection of MCI, and suggest a promising approach for detection of cognitive impairments associated with other disorders.

journal_name

J Neurosci Methods

authors

Lagun D,Manzanares C,Zola SM,Buffalo EA,Agichtein E

doi

10.1016/j.jneumeth.2011.06.027

subject

Has Abstract

pub_date

2011-09-30 00:00:00

pages

196-203

issue

1

eissn

0165-0270

issn

1872-678X

pii

S0165-0270(11)00362-1

journal_volume

201

pub_type

杂志文章,随机对照试验
  • PLDT (planarian light/dark test): an invertebrate assay to quantify defensive responding and study anxiety-like effects.

    abstract:BACKGROUND:Planarians, like rodents, instinctively spend more time in dark versus light environments when given a choice. This behavioral phenomenon is called negative phototaxis, which may reflect defensive responding related to an anxiety-like phenotype. NEW METHOD:We propose a planarian light/dark test, designated ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2017.10.010

    authors: Zewde AM,Yu F,Nayak S,Tallarida C,Reitz AB,Kirby LG,Rawls SM

    更新日期:2018-01-01 00:00:00

  • A microfluidic chip for axonal isolation and electrophysiological measurements.

    abstract::A microfluidic chip for culturing neurons and spatially isolating axons from somas is presented for use with visually guided whole-cell electrophysiological measurements. A modular design consisting of detachable and re-sealable layers is used to satisfy the requirements of both long-term neuron culturing as well as e...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2012.10.013

    authors: Jokinen V,Sakha P,Suvanto P,Rivera C,Franssila S,Lauri SE,Huttunen HJ

    更新日期:2013-01-30 00:00:00

  • Interactive 3-dimensional segmentation of MRI data in personal computer environment.

    abstract::We describe a method of interactive three-dimensional segmentation and visualization for anatomical magnetic resonance imaging (MRI) data in a personal computer environment. The visual feedback necessary during 3-D segmentation was provided by a ray casting algorithm, which was designed to allow users to interactively...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(01)00470-8

    authors: Yoo SS,Lee CU,Choi BG,Saiviroonporn P

    更新日期:2001-11-15 00:00:00

  • Direct interaction with no correlation: an experimental pitfall in neural systems.

    abstract::Neural systems continuously optimize how organisms process their environment and are highly dynamic. Building predictive models of these systems is challenging due to the large number of their elements. Therefore, in experimental and descriptive neurobiology the researcher typically does not seek to catalogue all vari...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2012.02.012

    authors: Janušonis S

    更新日期:2012-01-01 00:00:00

  • In vivo imaging of murine retinal ganglion cells.

    abstract::Current methods for in vivo retinal ganglion cells (RGCs) imaging involve either retrograde or intravitreal injection of chemical or biological tracers, which are invasive and may require repeated injection for serial long-term assessment. We have developed a confocal scanning laser ophthalmoscope technique (blue-ligh...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2007.10.018

    authors: Leung CK,Lindsey JD,Crowston JG,Ju WK,Liu Q,Bartsch DU,Weinreb RN

    更新日期:2008-03-15 00:00:00

  • Vertex analysis of neural tree structures containing trichotomous nodes.

    abstract::Vertex analysis defines dichotomous networks in terms of the relative frequencies of pendant (Vp) and nodal (Vd) vertices. Va, Vb and Vc comprise the 3 classes of Vd which connect 2, 1 and 0 Vp respectively. The vertex ratio (VR) of Va/Vb may be used to define topology since Va and Vc approach equality in large networ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(86)90118-4

    authors: Berry M,Sadler M,Flinn R

    更新日期:1986-10-01 00:00:00

  • Targeted knock-down of neuronal nitric oxide synthase expression in basal forebrain with RNA interference.

    abstract::Nitric oxide (NO) is a gas messenger with diverse physiological roles in the nervous system, from modulation of synaptic plasticity and neurogenesis to the mediation of neuronal death. NO production in the brain is catalyzed by three isoforms of NO synthase (NOS) including neuronal NOS (nNOS), inducible NOS and endoth...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2009.02.006

    authors: Mahairaki V,Xu L,Farah MH,Hatfield G,Kizana E,Marbán E,Koliatsos VE

    更新日期:2009-05-15 00:00:00

  • Comparison of extraction methods for peptidomics analysis of mouse brain tissue.

    abstract::The peptidome encompasses all the peptides present in a particular cell, tissue or organism at a particular point in time. Neuropeptidomics studies the peptidome of the nervous system and will become increasingly important in neuroscience research. Novel peptides can be discovered and, when applied to disease models, ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2011.02.023

    authors: Van Dijck A,Hayakawa E,Landuyt B,Baggerman G,Van Dam D,Luyten W,Schoofs L,De Deyn PP

    更新日期:2011-04-30 00:00:00

  • A note on the use of biocytin in anterograde tracing studies in the central nervous system: application at both light and electron microscopic level.

    abstract::A new neuroanatomical method based on the anterograde transport of biocytin has recently been reported. The validity of this method is examined closely on a number of well established pathways in the central nervous system, as well as the experimental parameters necessary for its effective use. iontophoretic applicati...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(91)90041-w

    authors: Izzo PN

    更新日期:1991-02-01 00:00:00

  • Variation of the choline signal intensity in the dorsolateral prefrontal cortex of rats exposed to the forced swimming test as detected by in vivo 1H MR spectroscopy.

    abstract:BACKGROUND:(1)H magnetic resonance spectroscopy (MRS) has documented an increased Cho/Cr ratio in the dorsolateral prefrontal cortex (DLPFC) in major depressive disorder (MDD). The aim of this study was to investigate neurochemical alterations in the left DLPFC, considered a main area of pathogenesis in depression, usi...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2007.05.022

    authors: Hong ST,Choi CB,Park C,Hong KS,Cheong C,Jeon YW,Choe BY

    更新日期:2007-09-15 00:00:00

  • Sensitivity of surface EMG-based conduction velocity estimates to local tissue in-homogeneities--influence of the number of channels and inter-channel distance.

    abstract::The aim of this simulation study was to investigate the influence of local tissue in-homogeneities on the estimates of muscle fiber conduction velocity (CV) from surface EMG signals. A recently developed analytical surface EMG model was used to generate simulated surface EMG signals from a planar layered volume conduc...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2004.07.011

    authors: Farina D,Mesin L

    更新日期:2005-03-15 00:00:00

  • Neurophysiology of neocortical slices resected from children undergoing surgical treatment for epilepsy.

    abstract::The recent emergence of surgical treatment of childhood epilepsy has led to the accessibility of young human cerebral tissue for electrophysiological studies of the mechanisms involved in epileptogenesis. Intracellular recordings were obtained from neurons in slices prepared from neocortical tissue resected from child...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(94)00193-k

    authors: Dudek FE,Wuarin JP,Tasker JG,Kim YI,Peacock WJ

    更新日期:1995-06-01 00:00:00

  • Convolution of mini distributions for fitting evoked synaptic amplitude histograms.

    abstract::According to a basic formulation of the quantal model, evoked synaptic currents are made up of a linear summation of uniquantal synaptic currents, which in turn are equivalent to the spontaneous miniature synaptic currents ('minis') that often persist when evoked neurotransmitter release is blocked. Here I describe a ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2003.09.018

    authors: Bekkers JM

    更新日期:2003-12-15 00:00:00

  • A horizontal slice preparation for examining the functional connectivity of dorsal column fibres in mouse spinal cord.

    abstract::In spinal cord injury (SCI) research, axon regeneration across spinal lesions is most often assessed using anatomical methods. It would be extremely advantageous, however, to examine the functional synaptic connectivity of regenerating fibres, using high-resolution electrophysiological methods. We have therefore devel...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2011.06.017

    authors: Flynn JR,Brichta AM,Galea MP,Callister RJ,Graham BA

    更新日期:2011-09-15 00:00:00

  • Chemical reduction of silver chromate: a procedure for electron microscopical analysis of Golgi-impregnated neurons.

    abstract::A procedure is described by which the solid silver chromate precipitate present in Golgi-impregnated neurons is reduced by a photographic developer into metallic silver grains or particles. The remaining silver chromate is subsequently removed, and the fine structure and synaptic relationships of the impregnated neuro...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(83)90023-7

    authors: Wouterlood FG,Nederlof J,Paniry S

    更新日期:1983-04-01 00:00:00

  • Development of BMP7-producing human cells, using a third generation lentiviral gene delivery system.

    abstract::Bone morphogenetic protein 7 (BMP7), a member of the transforming growth factor β (TGF-β) superfamily, plays important roles in the development of various tissues and organs in mouse and human. In particular, BMP7 is critical for the formation of the nervous system and it is considered to have therapeutic potential in...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2011.12.007

    authors: Chitty DW,Tremblay RG,Ribecco-Lutkiewicz M,Haukenfrers J,Zurakowski B,Massie B,Sikorska M,Bani-Yaghoub M

    更新日期:2012-03-30 00:00:00

  • Spike sorting with hidden Markov models.

    abstract::The ability to detect and sort overlapping spike waveforms in extracellular recordings is key to studies of neural coding at high spatial and temporal resolution. Most spike-sorting algorithms are based on initial spike detection (e.g. by a voltage threshold) and subsequent waveform classification. Much effort has bee...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2008.06.011

    authors: Herbst JA,Gammeter S,Ferrero D,Hahnloser RH

    更新日期:2008-09-15 00:00:00

  • Semantic-hierarchical model improves classification of spoken-word evoked electrocorticography.

    abstract::Classification of spoken word-evoked potentials is useful for both neuroscientific and clinical applications including brain-computer interfaces (BCIs). By evaluating whether adopting a biology-based structure improves a classifier's accuracy, we can investigate the importance of such structure in human brain circuitr...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2018.10.034

    authors: Na Y,Choi I,Jang DP,Kang JK,Woo J

    更新日期:2019-01-01 00:00:00

  • The amplitude of Mmax in human wrist flexors varies during different muscle contractions despite constant posture.

    abstract::The amplitude of the maximal direct motor response (Mmax) elicited by supramaximal peripheral nerve stimulation can vary with time and with changes in muscle length. We sought to investigate the variability in the amplitude of Mmax in the human wrist flexors (flexor carpi radialis, FCR) at a constant joint position du...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2005.03.016

    authors: Lee M,Carroll TJ

    更新日期:2005-12-15 00:00:00

  • Design of a fused phantom for quantitative evaluation of brain metabolites and enhanced quality assurance testing for magnetic resonance imaging and spectroscopy.

    abstract:BACKGROUND:Magnetic resonance imaging and spectroscopy (MRI-MRS) is a useful tool for the identification and evaluation of chemical changes in anatomical regions. Quality assurance (QA) is performed in either images or spectra using QA phantom. Therefore, consistent and uniform technical MRI-MRS QA is crucial. NEW MET...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2015.08.005

    authors: Song KH,Kim SY,Lee DW,Jung JY,Lee JH,Baek HM,Choe BY

    更新日期:2015-11-30 00:00:00

  • A simple circuit for producing vertical arrays of analogue signals and dot raster displays of nerve and muscle action potentials.

    abstract::It is often helpful to display analogue signals such as electromyograms, electroencephalograms, nerve action potentials, etc., in a regular vertical array. A special case of this display is the widely-used dot raster. This paper describes a simple circuit which enables up to 31 analogue signals to be thus displayed on...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(86)90009-9

    authors: Miles TS,Woodland MJ

    更新日期:1986-03-01 00:00:00

  • Realistic simulation of extracellular recordings.

    abstract::In this paper we present an efficient method to generate realistic simulations of extracellular recordings. The method uses a hybrid and computationally simple approach, where the features of the background noise arise naturally from its biophysical process of generation. The generated data resemble the characteristic...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2009.08.017

    authors: Martinez J,Pedreira C,Ison MJ,Quian Quiroga R

    更新日期:2009-11-15 00:00:00

  • A symmetrical Waxholm canonical mouse brain for NeuroMaps.

    abstract::NeuroMaps (2010) is a Web-based application that enables investigators to map data from macaque studies to a canonical atlas of the macaque brain. It currently serves as an image processor enabling them to create figures suitable for publication, presentation and archival purposes. Eventually it will enable investigat...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2010.11.028

    authors: Bowden DM,Johnson GA,Zaborsky L,Green WD,Moore E,Badea A,Dubach MF,Bookstein FL

    更新日期:2011-02-15 00:00:00

  • Flavopiridol reduces the impedance of neural prostheses in vivo without affecting recording quality.

    abstract::We hypothesized that re-entry into the cell cycle may be associated with reactive gliosis surrounding neural prostheses, and that administration of a cell cycle inhibitor (flavopiridol) at the time of surgery would reduce this effect. We investigated the effects of flavopiridol on recording quality and impedance over ...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/j.jneumeth.2009.06.026

    authors: Purcell EK,Thompson DE,Ludwig KA,Kipke DR

    更新日期:2009-10-15 00:00:00

  • Recording eye movements with video-oculography and scleral search coils: a direct comparison of two methods.

    abstract::A video-based 2D eye-tracking system (EyeLink version 2.04, SR Research Ltd/SMI) was compared with the scleral search coil technique for its performance on recording the properties of fixations and saccadic eye movements. Fixation positions and saccadic properties (amplitude, duration, and peak velocity) were calculat...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(01)00527-1

    authors: van der Geest JN,Frens MA

    更新日期:2002-03-15 00:00:00

  • Expansion of adult Schwann cells from mouse predegenerated peripheral nerves.

    abstract::We present an effective technique for culture and expansion of Schwann cells (SC) from adult peripheral nerves. Cultures from adult mouse sciatic nerves (one to six nerves per culture) in defined medium showed markedly higher purity and density of SC when the nerve was predegenerated in vivo for 7 days than when it wa...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(00)00221-1

    authors: Verdú E,Rodríguez FJ,Gudiño-Cabrera G,Nieto-Sampedro M,Navarro X

    更新日期:2000-06-30 00:00:00

  • Purification of peptides derived from proenkephalin A on Bio-Rex 70.

    abstract::The weakly acidic, cation-exchange resin Bio-Rex 70 was used at a low pH for chromatography of enkephalins and other peptides containing enkephalin sequences. Recoveries of various peptide standards and peptides in adrenal chromaffin cell extracts were greater than 85%. Catecholamines and other substances such as dens...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(85)90052-4

    authors: Wilson SP

    更新日期:1985-10-01 00:00:00

  • Neurochemical identification of fos-positive neurons using two-colour immunoperoxidase staining.

    abstract::The discovery of immediate early genes (IEG) has provided neuroscientists with a new functional mapping technique. Labelling of neural tissue for the protein product of IEG provides an activity map with single-cell resolution. When combined with labelling for the chemical identity of the neuron, this provides a powerf...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(93)90023-k

    authors: Smith DW,Day TA

    更新日期:1993-04-01 00:00:00

  • Recording of electroneurograms from the nerves innervating the pancreas of a dog.

    abstract::Electroneurograms (ENGs) from the vagus, splanchnic and pancreatic nerves innervating the pancreas of a dog, were recorded with chronically implanted silicone multi-electrode circular cuffs in an intact pancreas and in a pancreas partly disabled with alloxan. The cuffs contained 33 platinum electrodes (0.6x1.5 mm) arr...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/s0165-0270(01)00462-9

    authors: Rozman J,Zorko B,Bunc M

    更新日期:2001-12-15 00:00:00

  • Sampling variation caused by A/D cards due to external trigger.

    abstract::In electrophysiological recording, a microcomputer-based analog-to-digital (A/D) card is an indispensable instrument for signal acquisition and analysis. In our studies, evoked responses sampled by our A/D card showed variation among different cycles. If several cycles had been averaged, the resultant waveform would h...

    journal_title:Journal of neuroscience methods

    pub_type: 杂志文章

    doi:10.1016/0165-0270(95)00059-3

    authors: Jaw FS,Lin CW,Wang CY

    更新日期:1995-11-01 00:00:00