Large changes in the CRAC segment of gp41 of HIV do not destroy fusion activity if the segment interacts with cholesterol.

Abstract:

:The membrane-proximal external region (MPER) of the gp41 fusion protein of HIV is highly conserved among isolates of this virus and is considered a target for vaccine development. This region also appears to play a role in membrane fusion as well as localization of the virus to cholesterol-rich domains in membranes. The carboxyl terminus of MPER has the sequence LWYIK and appears to have an important role in cholesterol interactions. We have tested how amino acid substitutions that would affect the conformational flexibility of this segment could alter its interaction with cholesterol. We studied a family of peptides (all peptides as N-acetyl-peptide amides) with P, G, or A substituting for W and I of the LWYIK sequence. The peptide having the greatest effect on cholesterol distribution in membranes was the most flexible one, LGYGK. The corresponding mutation in gp41 resulted in a protein retaining 72% of the fusion activity of the wild-type protein. Two other peptides were synthesized, also containing two Gly residues, GWGIK and LWGIG, and did not have the ability to sequester cholesterol as efficiently as LGYGK did. Making the corresponding mutants of gp41 showed that these other two double Gly substitutions resulted in proteins that were much less fusogenic, although they were equally well expressed at the cell surface. The study demonstrates that drastic changes can be made in the LWYIK segment with the retention of a significant fraction of the fusogenic activity, as long as the mutant proteins interact with cholesterol.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Vishwanathan SA,Thomas A,Brasseur R,Epand RF,Hunter E,Epand RM

doi

10.1021/bi8014828

subject

Has Abstract

pub_date

2008-11-11 00:00:00

pages

11869-76

issue

45

eissn

0006-2960

issn

1520-4995

journal_volume

47

pub_type

杂志文章
  • Structural and functional characterization of the inhibition of urokinase by alpha 2-macroglobulin.

    abstract::We have investigated the interaction of alpha 2-macroglobulin (alpha 2M) with the serine proteinase urokinase, an activator of plasminogen. Urokinase formed sodium dodecyl sulfate stable complexes with purified alpha 2M and with alpha 2M in plasma. These complexes could be visualized after polyacrylamide gel electroph...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00336a014

    authors: Straight DL,Hassett MA,McKee PA

    更新日期:1985-07-16 00:00:00

  • Molecular structure of WlbB, a bacterial N-acetyltransferase involved in the biosynthesis of 2,3-diacetamido-2,3-dideoxy-D-mannuronic acid .

    abstract::The pathogenic bacteria Pseudomonas aeruginosa and Bordetella pertussis contain in their outer membranes the rare sugar 2,3-diacetamido-2,3-dideoxy-d-mannuronic acid. Five enzymes are required for the biosynthesis of this sugar starting from UDP-N-acetylglucosamine. One of these, referred to as WlbB, is an N-acetyltra...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi1005738

    authors: Thoden JB,Holden HM

    更新日期:2010-06-08 00:00:00

  • Catalytically active cross-species heterodimers of thymidylate synthase.

    abstract::Thymidylate synthase (TS) is a highly conserved homodimeric enzyme with two active sites, each of which contains amino acid residues from both subunits. We show that the conservation at the subunit interface between Escherichia coli TS and Lactobacillus casei TS is sufficient to permit the formation of a cross-species...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00090a002

    authors: Greene PJ,Maley F,Pedersen-Lane J,Santi DV

    更新日期:1993-10-05 00:00:00

  • Affinity labeling and functional analysis of the primer binding domain of HIV-1 reverse transcriptase.

    abstract::Six affinity reagents containing chemically reactive groups, either on the phosphate residue at the 5'-end or on the 5'- or 3'-end internucleoside phosphate linkages of the oligothymidylate primers, were used to covalently modify the human immunodeficiency virus type 1 reverse transcriptase (HIV-1 RT). After covalent ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00065a015

    authors: Andreola ML,Tarrago-Litvak L,Levina AS,Kolocheva TI,el Dirani-Diab R,Jamkovoy VI,Khalimskaya NL,Barr PJ,Litvak S,Nevinsky GA

    更新日期:1993-04-13 00:00:00

  • Reconsidering the mechanism of polyglutamine peptide aggregation.

    abstract::There are at least nine neurodegenerative diseases associated with proteins that contain an unusually expanded polyglutamine domain, the best known of which is Huntington's disease. In all of these diseases, the mutant protein aggregates into neuronal inclusions; it is generally, although not universally, believed tha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi700806c

    authors: Lee CC,Walters RH,Murphy RM

    更新日期:2007-11-06 00:00:00

  • Catalysis of phosphoryl group transfer. The role of divalent metal ions in the hydrolysis of lactic acid O-phenyl phosphate and salicylic acid O-aryl phosphates.

    abstract::The spontaneous hydrolyses of lactic acid O-phenyl phosphate (I) and, to a lesser extent, 3-hydroxybutyric acid O-phenyl phosphate (II) have been investigated and compared with similar intramolecular and bimolecular reactions. Compared to bimolecular nucleophilic reactions, the reactivity of II is similar to other sys...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00682a025

    authors: Steffens JJ,Siewers IJ,Benkovic SJ

    更新日期:1975-06-03 00:00:00

  • Chemical modification of mitochondrial transhydrogenase: evidence for two classes of sulfhydryl groups.

    abstract::Chemical-modification studies on submitochondrial particle pyridine dinucleotide transhydrogenase (EC 1.6.1.1) demonstrate the presence of one class of sulfhydryl group in the nicotinamide adenine dinucleotide phosphate (NADP) site and another peripheral to the active site. Reaction of the peripheral sulfhydryl group ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00615a015

    authors: Earle SR,O'Neal SG,Fisher RR

    更新日期:1978-10-31 00:00:00

  • Thermodynamics and specificity of the Mbp1-DNA interaction.

    abstract::The DNA binding domain of the yeast transcription factor Mbp1 is a winged helix-turn-helix structure, with an extended DNA binding site involving C-terminal "tail" residues. The thermodynamics of the interaction of the DNA binding domain with its target DNA sequence have been determined using fluorescence anisotropy a...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi702339q

    authors: Deleeuw L,Tchernatynskaia AV,Lane AN

    更新日期:2008-06-17 00:00:00

  • Kinetics and mechanism of transitions involving the lamellar, cubic, inverted hexagonal, and fluid isotropic phases of hydrated monoacylglycerides monitored by time-resolved X-ray diffraction.

    abstract::A study of the dynamics and mechanism of the various thermotropic phase transitions undergone by the hydrated monoacylglycerides monoolein and monoelaidin, in the temperature range of 20-120 degrees C and from 0 to 5 M NaCl, has been undertaken. Measurements were made by using time-resolved X-ray diffraction at the Co...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00394a008

    authors: Caffrey M

    更新日期:1987-10-06 00:00:00

  • Analysis of the ligand binding site in Fas (CD95) by site-directed mutagenesis and comparison with TNFR and CD40.

    abstract::Fas and its ligand (FasL) are members of the tumor necrosis factor receptor (TNFR) and tumor necrosis factor (TNF) superfamilies, respectively. Fas-FasL interactions trigger controlled cell death (apoptosis) in the immune system and thus play a key role in the regulation of immune responses. Structural details of the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972959d

    authors: Starling GC,Kiener PA,Aruffo A,Bajorath J

    更新日期:1998-03-17 00:00:00

  • Using 2-aminopurine fluorescence to detect bacteriophage T4 DNA polymerase-DNA complexes that are important for primer extension and proofreading reactions.

    abstract::The fluorescence of the base analogue 2-aminopurine (2AP) was used to probe bacteriophage T4 DNA polymerase-induced conformational changes in the template strand produced during the nucleotide incorporation and proofreading reactions. 2AP fluorescence in DNA is quenched by 2AP interactions with neighboring bases, but ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi051462y

    authors: Hariharan C,Reha-Krantz LJ

    更新日期:2005-12-06 00:00:00

  • Scaffold/matrix-attached regions act upon transcription in a context-dependent manner.

    abstract::Scaffold/matrix-attached regions (S/MARs) are cis-acting elements with a function outside transcribed regions and in introns. Although they usually augment transcriptional rates, their action is highly context-dependent. We cloned an 800 bp S/MAR element from the upstream border of the human interferon-beta domain at ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi960930o

    authors: Schübeler D,Mielke C,Maass K,Bode J

    更新日期:1996-08-27 00:00:00

  • Pyruvate dehydrogenase kinase isoform 2 activity limited and further inhibited by slowing down the rate of dissociation of ADP.

    abstract::Pyruvate dehydrogenase kinase 2 (PDK2) activity is enhanced by the dihydrolipoyl acetyltransferase core (E2 60mer) that binds PDK2 and a large number of its pyruvate dehydrogenase (E1) substrate. With E2-activated PDK2, K(+) at approximately 90 mM and Cl(-) at approximately 60 mM decreased the K(m) of PDK2 for ATP and...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi049488x

    authors: Bao H,Kasten SA,Yan X,Roche TE

    更新日期:2004-10-26 00:00:00

  • Expanding the Genetic Code of a Photoautotrophic Organism.

    abstract::The photoautotrophic freshwater cyanobacterium Synechococcus elongatus is widely used as a chassis for biotechnological applications as well as a photosynthetic bacterial model. In this study, a method for expanding the genetic code of this cyanobacterium has been established, thereby allowing the incorporation of unn...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00131

    authors: Chemla Y,Friedman M,Heltberg M,Bakhrat A,Nagar E,Schwarz R,Jensen MH,Alfonta L

    更新日期:2017-04-25 00:00:00

  • Activation of the leu-500 promoter: a topological domain generated by divergent transcription in a plasmid.

    abstract::The Salmonella typhimurium leu-500 promoter is active only in topA strains. In an earlier study (Chen, D., Bowater, R., Dorman, C., & Lilley, D. M. J. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 8784-8788), we showed that the activity of this promoter on a circular plasmid is a function of the transcription and translati...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00211a027

    authors: Chen D,Bowater RP,Lilley DM

    更新日期:1993-12-07 00:00:00

  • Cross-linked electron transfer complex between cytochrome c2 and the photosynthetic reaction center of Rhodobacter sphaeroides.

    abstract::Electron donation from the soluble cytochrome (cyt) c2 to the photooxidized primary donor, P+, of reaction centers isolated from Rhodobacter sphaeroides was studied by using chemical zero-length cross-linking. This cross-linking stabilizes a 1:1 covalent complex between subunit M of the reaction center and cyt c2. In ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi961350u

    authors: Drepper F,Dorlet P,Mathis P

    更新日期:1997-02-11 00:00:00

  • Localization of a reactive exofacial sulfhydryl on the glucose carrier of human erythrocytes.

    abstract::Tryptic digestion studies of the human erythrocyte glucose carrier have shown that a reactive and transport-sensitive exofacial sulfhydryl is located in the carboxy-terminal half of the molecule, corresponding to Cys347, Cys421, or Cys429. In the present studies, the erythrocyte glucose carrier labeled on the exofacia...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00497a014

    authors: May JM,Buchs A,Carter-Su C

    更新日期:1990-11-13 00:00:00

  • A single amino acid substitution in ribonucleolytic toxin restrictocin abolishes its specific substrate recognition activity.

    abstract::Restrictocin is a small basic protein produced by the fungus Aspergillus restrictus. It potently inhibits protein synthesis in eukaryotic cells by specifically cleaving a single phosphodiester bond in 28S rRNA. A histidine residue at position 49 in restrictocin has been implicated in its active site. A mutant of restr...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi971177h

    authors: Nayak SK,Batra JK

    更新日期:1997-11-04 00:00:00

  • Coherent dynamics during the primary electron-transfer reaction in membrane-bound reaction centers of Rhodobacter sphaeroides.

    abstract::The temporal evolution of the near-infrared stimulated emission band of the special pair excited state (P*) in the reaction center of Rhodobacter sphaeroides has been studied in intracytoplasmic membranes of the antenna-deficient RCO1 mutant at 10 K with a resolution of 30 fs. On the 100-fs time scale the emission ban...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00188a002

    authors: Vos MH,Jones MR,Hunter CN,Breton J,Lambry JC,Martin JL

    更新日期:1994-06-07 00:00:00

  • Hypoxanthine in deoxyribonucleic acid: generation by heat-induced hydrolysis of adenine residues and release in free form by a deoxyribonucleic acid glycosylase from calf thymus.

    abstract::A slow conversion of adenine residues to hypoxanthine occurs in single-stranded DNA when heated in neutral aqueous buffers. The rate of this reaction at pH 7.6 and 110 degrees C is k = 4 x 10(-8) s-1, as determined by base analysis of heat-treated DNA that contains radioactively labeled adenine residues. It is propose...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00567a010

    authors: Karran P,Lindahl T

    更新日期:1980-12-23 00:00:00

  • In silico mutation of cysteine residues in the ligand-binding domain of an N-methyl-D-aspartate receptor.

    abstract::The precise nature of redox modulation of N-methyl-d-aspartate (NMDA) receptors is still unclear, although it is thought to be related to the formation and breaking of disulfide bonds. Recent structural data demonstrated the way in which disulfide bonds in the ligand-binding core of the NR1 subunit are arranged. Howev...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi061462d

    authors: Kaye SL,Sansom MS,Biggin PC

    更新日期:2007-02-27 00:00:00

  • Three-dimensional structure of the apo form of the N-terminal EGF-like module of blood coagulation factor X as determined by NMR spectroscopy and simulated folding.

    abstract::The three-dimensional structure of a 42-residue fragment containing the N-terminal EGF-like module of blood coagulation factor X was determined by means of 2D NMR spectroscopy and computer simulation. The spectroscopic data consisted of 370 NOE distances and 27 dihedral angle constraints. These were used to generate p...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00141a004

    authors: Ullner M,Selander M,Persson E,Stenflo J,Drakenberg T,Teleman O

    更新日期:1992-07-07 00:00:00

  • Properties of the high-affinity single-stranded DNA binding state of the Escherichia coli recA protein.

    abstract::The properties of the high-affinity single-stranded DNA (ssDNA) binding state of Escherichia coli recA protein have been studied. We find that all of the nucleoside triphosphates that are hydrolyzed by recA protein induce a high-affinity ssDNA binding state. The effect of ATP binding to recA protein was partially sepa...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00404a021

    authors: Menetski JP,Varghese A,Kowalczykowski SC

    更新日期:1988-02-23 00:00:00

  • Nonphotochemical quenching of excitation energy in photosystem II. A picosecond time-resolved study of the low yield of chlorophyll a fluorescence induced by single-turnover flash in isolated spinach thylakoids.

    abstract::Chlorophyll a fluorescence emission is widely used as a noninvasive measure of a number of parameters related to photosynthetic efficiency in oxygenic photosynthetic organisms. The most important component for the estimation of photochemistry is the relative increase in fluorescence yield between dark-adapted samples ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9806854

    authors: Vasil'ev S,Bruce D

    更新日期:1998-08-04 00:00:00

  • Membrane fusion and inverted phases.

    abstract::We have found a correlation between liposome fusion kinetics and lipid phase behavior for several inverted phase forming lipids. N-Methylated dioleoylphosphatidylethanolamine (DOPE-Me), or mixtures of dioleoylphosphatidylethanolamine (DOPE) and dioleoylphosphatidylcholine (DOPC), will form an inverted hexagonal phase ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00435a011

    authors: Ellens H,Siegel DP,Alford D,Yeagle PL,Boni L,Lis LJ,Quinn PJ,Bentz J

    更新日期:1989-05-02 00:00:00

  • Investigation of phosphatidylethanolamine bilayers by deuterium and phosphorus-31 nuclear magnetic resonance.

    abstract::The motion of the ethanolamine head group in unsonicated lipid bilayers above and below the phase transition is studied by means of deuterium and phosphorus magnetic resonance. For this purpose, dipalmitoyl-3-sn-phosphatidylethanolamine is selectively deuterated at the two ethanolamine carbon atoms. The deuterium quad...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00669a001

    authors: Seelig J,Gally H

    更新日期:1976-11-30 00:00:00

  • Distortion of the active site of chymotrypsin complexed with a serpin.

    abstract::There is no complete understanding of how serine protease inhibitors of the serpin family inhibit their target enzymes. Structural and biochemical studies have suggested that serpins utilize a mechanism that is distinct from the standard mechanism of inhibition proposed for most small protein protease inhibitors. Prot...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi960233w

    authors: Plotnick MI,Mayne L,Schechter NM,Rubin H

    更新日期:1996-06-11 00:00:00

  • Beta-elimination of indole from L-tryptophan catalyzed by bacterial tryptophan synthase: a comparison between reactions catalyzed by tryptophanase and tryptophan synthase.

    abstract::Although tryptophan synthase catalyzes a number of pyridoxal phosphate dependent beta-elimination and beta-replacement reactions that are also catalyzed by tryptophanase, a principal and puzzling difference between the two enzymes lies in the apparent inability of tryptophan synthase to catalyze beta-elimination of in...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00363a010

    authors: Ahmed SA,Martin B,Miles EW

    更新日期:1986-07-29 00:00:00

  • Mycoplasma gallisepticum produces a histone-like protein that recognizes base mismatches in DNA.

    abstract::Mycoplasmas are the smallest known microorganisms, with drastically reduced genome sizes. One of the essential biochemical pathways lost in mycoplasmas is methylation-mediated DNA repair (MMR), which is responsible for correction of base substitutions, insertions, and deletions in both bacteria and higher organisms. W...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi2009097

    authors: Kamashev D,Oberto J,Serebryakova M,Gorbachev A,Zhukova Y,Levitskii S,Mazur AK,Govorun V

    更新日期:2011-10-11 00:00:00

  • Thermodynamic analysis of unfolding and dissociation in lactose repressor protein.

    abstract::Lactose repressor protein, regulator of lac enzyme expression in Escherichia coli, maintains its structure and function at extremely low protein concentrations (<10(-)12 M). To examine the unfolding and dissociation of this tetrameric protein, structural transitions in the presence of varying concentrations of urea we...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9900727

    authors: Barry JK,Matthews KS

    更新日期:1999-05-18 00:00:00