Bayesian disease mapping using product partition models.

Abstract:

:Our objective is to develop a model to estimate the relative risk of disease in each area, Ai, i=1, ... , n, of a region and to identify areas of unusually high or low risk. We use a product partition model (PPM) in which we assume that the true relative risks can be partitioned into a number of components or sets of areas where the relative risks are equal. The PPM allows the data to weight those partitions likely to hold and inference about particular parameters may be made by first conditioning on the partition and then averaging over all partitions. We develop Markov chain Monte Carlo (MCMC) techniques to approximate the posterior distributions of the partitions and the parameters. We first test the method in a simulation study and then apply it to data for two separate groups of different types of cancer in the Mid-Western Health Board region in Ireland. The results are compared with those obtained using the standardized mortality ratio method, an empirical Bayes method, a spatial scan method and a nonparametric Bayesian method.

journal_name

Stat Med

journal_title

Statistics in medicine

authors

Hegarty A,Barry D

doi

10.1002/sim.3253

subject

Has Abstract

pub_date

2008-08-30 00:00:00

pages

3868-93

issue

19

eissn

0277-6715

issn

1097-0258

journal_volume

27

pub_type

杂志文章
  • Analysis of cluster randomized cross-over trial data: a comparison of methods.

    abstract::In a cluster randomized cross-over trial, all participating clusters receive both intervention and control treatments consecutively, in separate time periods. Patients recruited by each cluster within the same time period receive the same intervention, and randomization determines order of treatment within a cluster. ...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.2537

    authors: Turner RM,White IR,Croudace T,PIP Study Group.

    更新日期:2007-01-30 00:00:00

  • Spatially regularized estimation for the analysis of dynamic contrast-enhanced magnetic resonance imaging data.

    abstract::Competing compartment models of different complexities have been used for the quantitative analysis of dynamic contrast-enhanced magnetic resonance imaging data. We present a spatial elastic net approach that allows to estimate the number of compartments for each voxel such that the model complexity is not fixed a pri...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.5997

    authors: Sommer JC,Gertheiss J,Schmid VJ

    更新日期:2014-03-15 00:00:00

  • Classification using ensemble learning under weighted misclassification loss.

    abstract::Binary classification rules based on covariates typically depend on simple loss functions such as zero-one misclassification. Some cases may require more complex loss functions. For example, individual-level monitoring of HIV-infected individuals on antiretroviral therapy requires periodic assessment of treatment fail...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.8082

    authors: Xu Y,Liu T,Daniels MJ,Kantor R,Mwangi A,Hogan JW

    更新日期:2019-05-20 00:00:00

  • Using follow-up data to avoid omitted variable bias: an application to cardiovascular epidemiology.

    abstract::Omitted variable bias is discussed in the context of linear models. It is shown that the effect of omitted variables can be controlled in linear models for metric dependent variables by using data from follow-up studies. Two different models for analysing such data are proposed. In the first model the omitted variable...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.4780110906

    authors: Rehm J,Arminger G,Kohlmeier L

    更新日期:1992-06-30 00:00:00

  • Internal pilot studies I: type I error rate of the naive t-test.

    abstract::When sample size is recalculated using unblinded interim data, use of the usual t-test at the end of a study may lead to an elevated type I error rate. This paper describes a numerical quadrature investigation to calculate the true probability of rejection as a function of the time of the recalculation, the magnitude ...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0258(19991230)18:24<3481::aid-s

    authors: Wittes J,Schabenberger O,Zucker D,Brittain E,Proschan M

    更新日期:1999-12-30 00:00:00

  • Deficiencies in clinical reports for registration of drugs.

    abstract::A considerable number of the clinical reports which are presented to the Dutch Board for the Evaluation of Drugs, have deficiencies and/or shortcomings. A number of these, including loose description of the target population and sampling method, methodological flaws, incorrect treatment of withdrawals, confounding of ...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.4780020209

    authors: De Jonge H

    更新日期:1983-04-01 00:00:00

  • On design considerations and randomization-based inference for community intervention trials.

    abstract::This paper discusses design considerations and the role of randomization-based inference in randomized community intervention trials. We stress that longitudinal follow-up of cohorts within communities often yields useful information on the effects of intervention on individuals, whereas cross-sectional surveys can us...

    journal_title:Statistics in medicine

    pub_type: 杂志文章,评审

    doi:10.1002/(SICI)1097-0258(19960615)15:11<1069::AID-S

    authors: Gail MH,Mark SD,Carroll RJ,Green SB,Pee D

    更新日期:1996-06-15 00:00:00

  • The partial testing design: a less costly way to test equivalence for sensitivity and specificity.

    abstract::We propose a new, less costly, design to test the equivalence of digital versus analogue mammography in terms of sensitivity and specificity. Because breast cancer is a rare event among asymptomatic women, the sample size for testing equivalence of sensitivity is larger than that for testing equivalence of specificity...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0258(19981015)17:19<2219::aid-s

    authors: Baker SG,Connor RJ,Kessler LG

    更新日期:1998-10-15 00:00:00

  • Practical issues in data monitoring of clinical trials: summary of responses to a questionnaire at NIH.

    abstract::A targeted poll was undertaken to compare and contrast models of data monitoring of randomized clinical trials sponsored by the National Institutes of Health. In an attempt to represent the institutes which conduct clinical trials, twelve individuals were selected and asked to respond to a questionnaire specifically p...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.4780120520

    authors: Geller NL,Stylianou M

    更新日期:1993-03-01 00:00:00

  • Dose-interpolation of immunoassay data: uncertainties associated with curve-fitting.

    abstract::Estimates of analyte concentrations, obtained by immunoassay, have error distributions which are generally underestimated. Better estimates, which take into account the distribution of the response metameter of the calibration curve and uncertainties associated with the location of the fitted curve, have been obtained...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.4780050208

    authors: Kay C,Nix AB,Kemp KW,Rowlands RJ,Richards G,Groom GV,Griffiths K,Wilson DW

    更新日期:1986-03-01 00:00:00

  • Optimal designs for Michaelis-Menten kinetic studies.

    abstract::Many reactions in enzymology are governed by the Michaelis-Menten equation. Characterising these reactions requires the estimation of the parameters K(M) and V(max) which determine the Michaelis-Menten equation and this is done by observing rates of reactions at a set of substrate concentrations. The choice of substra...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.1612

    authors: Matthews JN,Allcock GC

    更新日期:2004-02-15 00:00:00

  • Estimating heterogeneous treatment effects for latent subgroups in observational studies.

    abstract::Individuals may vary in their responses to treatment, and identification of subgroups differentially affected by a treatment is an important issue in medical research. The risk of misleading subgroup analyses has become well known, and some exploratory analyses can be helpful in clarifying how covariates potentially i...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.7970

    authors: Kim HJ,Lu B,Nehus EJ,Kim MO

    更新日期:2019-02-10 00:00:00

  • Analysis of the ratio of marginal probabilities in a matched-pair setting.

    abstract::Statistical methods for testing and interval estimation of the ratio of marginal probabilities in the matched-pair setting are considered in this paper. We are especially interested in the situation where the null value is not one, as in one-sided equivalence trials. We propose a Fieller-type statistic based on constr...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.1017

    authors: Nam JM,Blackwelder WC

    更新日期:2002-03-15 00:00:00

  • Bayesian clinical trials in action.

    abstract::Although the frequentist paradigm has been the predominant approach to clinical trial design since the 1940s, it has several notable limitations. Advancements in computational algorithms and computer hardware have greatly enhanced the alternative Bayesian paradigm. Compared with its frequentist counterpart, the Bayesi...

    journal_title:Statistics in medicine

    pub_type: 杂志文章,评审

    doi:10.1002/sim.5404

    authors: Lee JJ,Chu CT

    更新日期:2012-11-10 00:00:00

  • Proportional hazards models and age-period-cohort analysis of cancer rates.

    abstract::Age-period-cohort (APC) analysis is widely used in cancer epidemiology to model trends in cancer rates. We develop methods for comparative APC analysis of two independent cause-specific hazard rates assuming that an APC model holds for each one. We construct linear hypothesis tests to determine whether the two hazards...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.3865

    authors: Rosenberg PS,Anderson WF

    更新日期:2010-05-20 00:00:00

  • A Naive Bayes machine learning approach to risk prediction using censored, time-to-event data.

    abstract::Predicting an individual's risk of experiencing a future clinical outcome is a statistical task with important consequences for both practicing clinicians and public health experts. Modern observational databases such as electronic health records provide an alternative to the longitudinal cohort studies traditionally ...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.6526

    authors: Wolfson J,Bandyopadhyay S,Elidrisi M,Vazquez-Benitez G,Vock DM,Musgrove D,Adomavicius G,Johnson PE,O'Connor PJ

    更新日期:2015-09-20 00:00:00

  • Methodological pitfalls in the analysis of contraceptive failure.

    abstract::Although the literature on contraceptive failure is vast and is expanding rapidly, our understanding of the relative efficacy of methods is quite limited because of defects in the research design and in the analytical tools used by investigators. Errors in the literature range from simple arithmetical mistakes to outr...

    journal_title:Statistics in medicine

    pub_type: 杂志文章,评审

    doi:10.1002/sim.4780100206

    authors: Trussell J

    更新日期:1991-02-01 00:00:00

  • The probability of a cancer cluster due to chance alone.

    abstract::We propose to use a very simple model to test whether a cancer cluster is due to chance alone. We focus on the acute childhood leukaemia cluster in Columbus, Ohio. In 1975, 12 leukaemia cases were observed in Columbus while the expected number is 6 cases per year. According to our simple model, the probability of such...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/1097-0258(20000830)19:16<2195::aid-sim522>

    authors: Schinazi RB

    更新日期:2000-08-30 00:00:00

  • Easy and accurate variance estimation of the nonparametric estimator of the partial area under the ROC curve and its application.

    abstract::The receiver operating characteristic (ROC) curve is a popular technique with applications, for example, investigating an accuracy of a biomarker to delineate between disease and non-disease groups. A common measure of accuracy of a given diagnostic marker is the area under the ROC curve (AUC). In contrast with the AU...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.6863

    authors: Yu J,Yang L,Vexler A,Hutson AD

    更新日期:2016-06-15 00:00:00

  • Evaluating the cost-effectiveness of vaccination programmes: a dynamic perspective.

    abstract::Although there are many models which are used to calculate the health benefits (and thus the cost-effectiveness) of vaccination programmes, they can be divided into two groups: those which assume a constant force of infection, that is a constant per-susceptible rate of infection; and those which assume that the force ...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0258(19991215)18:23<3263::aid-s

    authors: Edmunds WJ,Medley GF,Nokes DJ

    更新日期:1999-12-15 00:00:00

  • Doubly robust generalized estimating equations for longitudinal data.

    abstract::A popular method for analysing repeated-measures data is generalized estimating equations (GEE). When response data are missing at random (MAR), two modifications of GEE use inverse-probability weighting and imputation. The weighted GEE (WGEE) method involves weighting observations by their inverse probability of bein...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.3520

    authors: Seaman S,Copas A

    更新日期:2009-03-15 00:00:00

  • A general statistical principle for changing a design any time during the course of a trial.

    abstract::A general method is presented that allows the researcher to change statistical design elements such as the residual sample size during the course of an experiment, to include an interim analysis for early stopping when no formal rule for early stopping was foreseen, to increase or reduce the number of planned interim ...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.1852

    authors: Müller HH,Schäfer H

    更新日期:2004-08-30 00:00:00

  • Incorporating data from various trial designs into a mixed treatment comparison model.

    abstract::Estimates of relative efficacy between alternative treatments are crucial for decision making in health care. Bayesian mixed treatment comparison models provide a powerful methodology to obtain such estimates when head-to-head evidence is not available or insufficient. In recent years, this methodology has become wide...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.5764

    authors: Schmitz S,Adams R,Walsh C

    更新日期:2013-07-30 00:00:00

  • Approximate multinormal probabilities applied to correlated multiple endpoints in clinical trials.

    abstract::Clinical trials with multiple endpoints incur increased familywise type I errors. The Bonferroni correction is a common method used to modify the p-values to account for multiple significance testing. For independent endpoints the Bonferroni method is slightly conservative whereas with high correlation the conservatis...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.4780100712

    authors: James S

    更新日期:1991-07-01 00:00:00

  • Parametric randomization-based methods for correcting for treatment changes in the assessment of the causal effect of treatment.

    abstract::We develop parametric maximum likelihood methods to adjust for treatment changes during follow-up in order to assess the causal effect of treatment in clinical trials with time-to-event outcomes. The accelerated failure time model of Robins and Tsiatis relates each observed event time to the underlying event time that...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.1618

    authors: Walker AS,White IR,Babiker AG

    更新日期:2004-02-28 00:00:00

  • Inconsistencies with formulas for the standard error of the standardized mean difference of repeated measures experiments.

    abstract::There are inconsistencies between the formulas for the variance of standardized mean difference (SMD) in the Cochrane Handbook for Systematic Reviews and the variance reported in other sources. Instead of the variance appropriate for the SMD of a crossover experiment, the Cochrane Handbook uses the variance appropriat...

    journal_title:Statistics in medicine

    pub_type: 信件

    doi:10.1002/sim.8669

    authors: Kitchenham B,Madeyski L

    更新日期:2020-11-30 00:00:00

  • A comparison of propensity score methods: a case-study estimating the effectiveness of post-AMI statin use.

    abstract::There is an increasing interest in the use of propensity score methods to estimate causal effects in observational studies. However, recent systematic reviews have demonstrated that propensity score methods are inconsistently used and frequently poorly applied in the medical literature. In this study, we compared the ...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.2328

    authors: Austin PC,Mamdani MM

    更新日期:2006-06-30 00:00:00

  • Linear regression for bivariate censored data via multiple imputation.

    abstract::Bivariate survival data arise, for example, in twin studies and studies of both eyes or ears of the same individual. Often it is of interest to regress the survival times on a set of predictors. In this paper we extend Wei and Tanner's multiple imputation approach for linear regression with univariate censored data to...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/(sici)1097-0258(19991130)18:22<3111::aid-s

    authors: Pan W,Kooperberg C

    更新日期:1999-11-30 00:00:00

  • Stochastically curtailed phase II clinical trials.

    abstract::Phase II trials often test the null hypothesis H(0): p or=p(1), where p is the true unknown proportion responding to the new treatment, p(0) is the greatest response proportion which is deemed clinically ineffective, and p(1) is the smallest response proportion which is deemed clinically effe...

    journal_title:Statistics in medicine

    pub_type: 杂志文章

    doi:10.1002/sim.2653

    authors: Ayanlowo AO,Redden DT

    更新日期:2007-03-30 00:00:00

  • Methods for dose finding studies in cancer clinical trials: a review and results of a Monte Carlo study.

    abstract::We discuss some of the statistical approaches to the design and analysis of phase I clinical trials in cancer. An attempt is made to identify the issues, particular to this type of trial, that should be addressed by an appropriate methodology. A brief review of schemes currently in use is provided together with our vi...

    journal_title:Statistics in medicine

    pub_type: 杂志文章,评审

    doi:10.1002/sim.4780101104

    authors: O'Quigley J,Chevret S

    更新日期:1991-11-01 00:00:00