Structural analysis of sterol distributions in the plasma membrane of living cells.

Abstract:

:Although plasma membrane (PM) cholesterol-rich and -poor domains have been isolated by subcellular fractionation, the real-time arrangement of cholesterol in such domains in living cells is still unclear. Therefore, dehydroergosterol (DHE), a naturally occurring fluorescent sterol, was incorporated into cultured L-cell fibroblasts. Two PM markers, the enhanced cyan fluorescent protein (ECFP-Mem) and 3'-dioctadecyloxacarbocyanine perchlorate [DiOC(18)(3)], were used to distinguish DHE localized at the PM of living cells. Spatial enrichment of DHE in the PM of living cells was visualized in real time by multiphoton laser scanning microscopy (MPLSM). Quantitative models and image-processing techniques were developed for statistical analysis of the distribution of DHE within the PM. The PM was resolved from the cytoplasm in a two-step process, and a smooth trajectory reference of the PM was refined by statistical regression and moments-based techniques. Thus, DHE intensities over the PM were measured following the major DHE intensity distributions. Spatial distributions of DHE within the PM were examined by a statistical inference technique, complete spatial randomness (CSR). For PM regions densely populated with DHE, the distributions of DHE exhibited statistical arrangements that were not spatial random (i.e., homogeneous Poisson process) or regular but, instead, exhibited strong cluster patterns. In effect, real-time MPLSM imaging data for the first time demonstrated that sterol enrichment occurred in clustered regions in the PM, consistent with the existence of cholesterol-rich domains in the plasma membrane of living cells.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Zhang W,McIntosh AL,Xu H,Wu D,Gruninger T,Atshaves B,Liu JC,Schroeder F

doi

10.1021/bi048172m

subject

Has Abstract

pub_date

2005-03-01 00:00:00

pages

2864-84

issue

8

eissn

0006-2960

issn

1520-4995

journal_volume

44

pub_type

杂志文章
  • Influence of lipid composition on physical properties and peg-mediated fusion of curved and uncurved model membrane vesicles: "nature's own" fusogenic lipid bilayer.

    abstract::Poly(ethylene glycol) (PEG)-mediated fusion of phosphatidylcholine model membranes has been shown to mimic the protein-mediated biomembrane process [Lee, J., and Lentz, B. R. (1998) Proc. Natl. Acad. Sci. U.S.A. 95, 9274-9279]. Unlike the simple model membranes used in this earlier study, the lipid composition of fuso...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi002030k

    authors: Haque ME,McIntosh TJ,Lentz BR

    更新日期:2001-04-10 00:00:00

  • Groups with polar characteristics can locate at both shallow and deep locations in membranes: the behavior of dansyl and related probes.

    abstract::To understand the relationship between the chemical structure of polar molecules and their membrane location, the behavior of dansyl (dimethylaminonaphthalenesulfonyl) and related polar fluorescent probes was examined. The depth of these probes in lipid bilayers was determined by parallax analysis of fluorescence quen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9726234

    authors: Asuncion-Punzalan E,Kachel K,London E

    更新日期:1998-03-31 00:00:00

  • Electron spin echo modulation and nuclear relaxation studies of staphylococcal nuclease and its metal-coordinating mutants.

    abstract::Electron spin echo envelope modulation (ESEEM) spectroscopy has been applied to the determination of the number of water molecules coordinated to the metal in the binary complex of staphylococcal nuclease with Mn2+, to the ternary enzyme-Mn2+-3',5'-pdTp complex, and to ternary complexes of a number of mutant enzymes i...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00421a010

    authors: Serpersu EH,McCracken J,Peisach J,Mildvan AS

    更新日期:1988-10-18 00:00:00

  • Studies on the cooperative binding of the Escherichia coli DNA unwinding protein to single-stranded DNA.

    abstract::The cooperative binding of the Escherichia coli DNA unwinding protein to single-stranded DNA has been studied by electron microscopy. Analysis of the electron microscopic data by means of a simple statistical mechanical model has yielded a value of 3.8-7.6 X 10(10) l./mol for the cooperative binding constant in 0.15 M...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00696a023

    authors: Ruyechan WT,Wetmur JG

    更新日期:1975-12-16 00:00:00

  • Deglycosylated human follitropin: characterization and effects on adenosine cyclic 3',5'-phosphate production in porcine granulosa cells.

    abstract::Chemical deglycosylation of gonadotropins with hydrogen fluoride (HF) has facilitated the investigation of the structure-function relationship of the individual peptide and oligosaccharide moieties in the mechanism of hormone action. These studies have dealt almost exclusively with lutropin or human choriogonadotropin...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00361a030

    authors: Calvo FO,Keutmann HT,Bergert ER,Ryan RJ

    更新日期:1986-07-01 00:00:00

  • Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).

    abstract::In globular proteins, there are intermolecular hydrogen bonds between protein and water molecules, and between water molecules, which are bound with the proteins, in addition to intramolecular hydrogen bonds. To estimate the contribution of these hydrogen bonds to the conformational stability of a protein, the thermod...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9910169

    authors: Takano K,Yamagata Y,Funahashi J,Hioki Y,Kuramitsu S,Yutani K

    更新日期:1999-09-28 00:00:00

  • Dramatic differences in the roles in lipid metabolism of two isoforms of diacylglycerol kinase.

    abstract::Lipid species changes for SV40-transformed fibroblasts from wild-type or from diacylglycerol kinase-epsilon (DGKepsilon) or diacylglycerol kinase-alpha (DGKalpha) knockout mice were determined for glycerophospholipids, polyphosphatidylinositides (GPInsP n ) and diacylglycerol (DAG) using direct infusion mass spectrome...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi800492c

    authors: Milne SB,Ivanova PT,Armstrong MD,Myers DS,Lubarda J,Shulga YV,Topham MK,Brown HA,Epand RM

    更新日期:2008-09-09 00:00:00

  • Orientation of type VI collagen monomers in molecular aggregates.

    abstract::Type VI collagen, prepared from guanidine extracts of human amnion, contains very little monomeric material, the major forms being dimers and tetramers. In order to study the orientation of the molecules in these aggregates, they were digested with pepsin followed by bacterial collagenase. Two fragments were isolated,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00435a020

    authors: Kuo HJ,Keene DR,Glanville RW

    更新日期:1989-05-02 00:00:00

  • Soybean lipoxygenase-1 oxygenates synthetic polyenoic fatty acids with an altered positional specificity: evidence for inverse substrate alignment.

    abstract::The positional specificity is the decisive enzyme property for classification of lipoxygenases and for the currently used lipoxygenase nomenclature. It has been reported before that soybean lipoxygenase-1, which oxygenates polyenoic fatty acids at alkaline pH to the corresponding n - 6 hydroperoxy derivative, exhibits...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi010700w

    authors: Ivanov I,Rathmann J,Myagkova G,Kuhn H

    更新日期:2001-08-28 00:00:00

  • Structural and guanosine triphosphate/diphosphate requirements for transit peptide recognition by the cytosolic domain of the chloroplast outer envelope receptor, Toc34.

    abstract::Toc34 is a transmembrane protein located in the outer envelope membrane of chloroplasts and involved in transit peptide recognition. The cytosolic region of Toc34 reveals 34% alpha-helical and 26% beta-strand structure and is stabilized by intramolecular electrostatic interaction. Toc34 binds both chloroplast preprote...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011361+

    authors: Schleiff E,Soll J,Sveshnikova N,Tien R,Wright S,Dabney-Smith C,Subramanian C,Bruce BD

    更新日期:2002-02-12 00:00:00

  • Competition between Fibrillation and Induction of Vesicle Fusion for the Membrane-Associated 40-Residue β-Amyloid Peptides.

    abstract::Disruption of the cell membrane by the β-amyloid (Aβ) peptides has been considered as a main mechanism of Alzheimer's disease. The peptide-to-lipid molar ratio (P:L) varies over a broad range biologically. We report here that two of the previously observed Aβ evolution pathways, fibrillation and induction of vesicle f...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.5b00321

    authors: Akinlolu RD,Nam M,Qiang W

    更新日期:2015-06-09 00:00:00

  • NMR structure of the cathelin-like domain of the protegrin-3 precursor.

    abstract::In mammals, numerous precursors of antibacterial peptides with unrelated sequences share a similar prosequence of 94-114 residues, termed the cathelin-like domain. The cathelin-like domain of protegrin-3 (ProS) was overexpressed in Escherichia coli and uniformly labeled with (15)N or (15)N and (13)C, and its three-dim...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi027133c

    authors: Yang Y,Sanchez JF,Strub MP,Brutscher B,Aumelas A

    更新日期:2003-04-29 00:00:00

  • Synchronization of the three reaction centers within carbamoyl phosphate synthetase.

    abstract::Carbamoyl phosphate synthetase from E. coli catalyzes the synthesis of carbamoyl phosphate through a series of four reactions occurring at three active sites connected by a molecular tunnel of 100 A. To understand the mechanism for coordination and synchronization among the active sites, the pre-steady-state time cour...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992772h

    authors: Miles BW,Raushel FM

    更新日期:2000-05-02 00:00:00

  • Inactivation of soybean lipoxygenase 1 by 12-iodo-cis-9-octadecenoic acid.

    abstract::12-Iodo-cis-9-octadecenoic acid (12-IODE) is a time-dependent, irreversible inactivator of soybean lipoxygenase 1. The rate of inactivation is independent of 12-IODE concentration above 20 microM and is half-maximal at about 4 microM. Inactivation by 12-IODE requires lipid hydroperoxide, which must be present even aft...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00424a019

    authors: Rotenberg SA,Grandizio AM,Selzer AT,Clapp CH

    更新日期:1988-11-29 00:00:00

  • FTIR spectroscopy of synechocystis 6803 mutants affected on the hydrogen bonds to the carbonyl groups of the PsaA chlorophyll of P700 supports an extensive delocalization of the charge in P700+.

    abstract::P700, the primary electron donor of photosystem I is an asymmetric dimer made of one molecule of chlorophyll a' (P(A)) and one of chlorophyll a (P(B)). While the carbonyl groups of P(A) are involved in hydrogen-bonding interactions with several surrounding amino acid side chains and a water molecule, P(B) does not eng...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi049515j

    authors: Pantelidou M,Chitnis PR,Breton J

    更新日期:2004-07-06 00:00:00

  • Cloning of a complementary deoxyribonucleic acid encoding a portion of rat intestinal preapolipoprotein AIV messenger ribonucleic acid.

    abstract::Apolipoprotein AIV is one of the principal apolipoproteins synthesized by the rat small intestine. We have cloned a cDNA encoding a portion of preapolipoprotein AIV mRNA. A kinetically fractionated cDNA probe highly enriched for the abundant intestinal mucosal mRNA sequences was used to screen a library of recombinant...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00265a007

    authors: Gordon JI,Smith DP,Alpers DH,Strauss AW

    更新日期:1982-10-26 00:00:00

  • Evidence that the adaptation region of the aspartate receptor is a dynamic four-helix bundle: cysteine and disulfide scanning studies.

    abstract::The aspartate receptor is one of the ligand-specific, homodimeric chemoreceptors that detects extracellular attractants and triggers the chemotaxis pathway of Escherichia coli and Salmonella typhimurium. This receptor regulates the activity of the histidine kinase CheA, which forms a kinetically stable complex with th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0507884

    authors: Winston SE,Mehan R,Falke JJ

    更新日期:2005-09-27 00:00:00

  • Anthracycline-DNA interactions studied with linear dichroism and fluorescence spectroscopy.

    abstract::DNA-binding geometry and dynamics of a number of anthracyclines, including adriamycin and 4-demethoxydaunorubicin, interacting with DNA have been studied by means of linear dichroism and fluorescence techniques. The anthracycline chromophore is found to be approximately parallel to the plane of the DNA bases and to ha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00421a024

    authors: Eriksson M,Nordén B,Eriksson S

    更新日期:1988-10-18 00:00:00

  • Inhibition of InhA, the enoyl reductase from Mycobacterium tuberculosis, by triclosan and isoniazid.

    abstract::Structural and genetic studies indicate that the antibacterial compound triclosan, an additive in many personal care products, is an inhibitor of EnvM, the enoyl reductase from Escherichia coli. Here we show that triclosan specifically inhibits InhA, the enoyl reductase from Mycobacterium tuberculosis and a target for...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0008940

    authors: Parikh SL,Xiao G,Tonge PJ

    更新日期:2000-07-04 00:00:00

  • Role of glycine 81 in (S)-mandelate dehydrogenase from Pseudomonas putida in substrate specificity and oxidase activity.

    abstract::(S)-Mandelate dehydrogenase from Pseudomonas putida belongs to a FMN-dependent enzyme family that oxidizes (S)-alpha-hydroxyacids. Despite a high degree of sequence and structural similarity, this family can be divided into three subgroups based on the different oxidants utilized in the second oxidative half-reaction....

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi049005p

    authors: Dewanti AR,Xu Y,Mitra B

    更新日期:2004-08-24 00:00:00

  • Inhibition of protein interactions with the beta 2 sliding clamp of Escherichia coli DNA polymerase III by peptides from beta 2-binding proteins.

    abstract::The sliding clamp of the Escherichia coli replisome is now understood to interact with many proteins involved in DNA synthesis and repair. A universal interaction motif is proposed to be one mechanism by which those proteins bind the E. coli sliding clamp, a homodimer of the beta subunit, at a single site on the dimer...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi036229j

    authors: Wijffels G,Dalrymple BP,Prosselkov P,Kongsuwan K,Epa VC,Lilley PE,Jergic S,Buchardt J,Brown SE,Alewood PF,Jennings PA,Dixon NE

    更新日期:2004-05-18 00:00:00

  • Differences in rearrangements of H1 and H5 in chicken erythrocyte chromatin.

    abstract::H1 can rearrange in chicken erythrocyte polynucleosomes in 80 mM NaCl buffers. These rearrangements have been studied by sedimentation analysis. H1 redistributes between polynucleosomes as well as between polynucleosomes and monosomes. In these rearrangements H1 molecules move to free DNA sites. In contrast to H1, the...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00508a010

    authors: Lasters I,Muyldermans S,Wyns L,Hamers R

    更新日期:1981-03-03 00:00:00

  • Arginine 177 is involved in Mn(II) binding by manganese peroxidase.

    abstract::Site-directed mutations R177A and R177K in the gene encoding manganese peroxidase isozyme 1 (mnp1) from Phanerochaete chrysosporium were generated. The mutant enzymes were expressed in P. chrysosporium during primary metabolic growth under the control of the glyceraldehyde-3-phosphate dehydrogenase gene promoter, puri...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990943c

    authors: Sollewijn Gelpke MD,Moënne-Loccoz P,Gold MH

    更新日期:1999-08-31 00:00:00

  • 1H nuclear magnetic resonance double resonance study of oxytocin in aqueous solution.

    abstract::Peptide NH resonances in the 250 MHZ 1H nuclear magnetic resonance (NMR) spectrum of oxytocin in H2O were assigned to specific amino acid residues by the "underwater decoupling" technique (i.e., decoupling from corresponding CalphaH resonances, which are buried beneath the intense water peak). These experiments confir...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00650a025

    authors: Glickson JD,Rowan R,Pitner TP,Dadok J,Bothner-By AA,Walter R

    更新日期:1976-03-09 00:00:00

  • Postulated role of calsequestrin in the regulation of calcium release from sarcoplasmic reticulum.

    abstract::Ca2+ release from heavy sarcoplasmic reticulum (SR) vesicles was induced by 2 mM caffeine, and the amount (A) and the rate constant (k) of Ca2+ release were investigated as a function of the extent of Ca2+ loading. Under both passive and active loading conditions, the A value increased monotonically in parallel to Ca2...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00442a033

    authors: Ikemoto N,Ronjat M,Mészáros LG,Koshita M

    更新日期:1989-08-08 00:00:00

  • Molten globule formation in apomyoglobin monitored by the fluorescent probe Nile Red.

    abstract::The interaction of nile red (NR) with apomyoglobin (ApoMb) in the native (pH 7) and molten globule (pH 4) states was investigated using experimental and computational methods. NR binds to hydrophobic locations in ApoMb with higher affinity (K(d) = 25 +/- 5 microM) in the native state than in the molten globule state (...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi051905y

    authors: Polverini E,Cugini G,Annoni F,Abbruzzetti S,Viappiani C,Gensch T

    更新日期:2006-04-25 00:00:00

  • Acid-base properties of ionophore A23187 in methanol-water solutions and bound to unilamellar vesicles of dimyristoylphosphatidylcholine.

    abstract::The acid-base properties of ionophore A23187 in methanol-water solutions (0--95% w/w) and bound to unilamellar vesicles of dimyristoylphosphatidylcholine were examined by ultraviolet and fluorescence spectroscopy, and the spectral properties for the acidic and basic forms were defined under these conditions. Standard ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00539a023

    authors: Kauffman RF,Taylor RW,Pfeiffer DR

    更新日期:1982-05-11 00:00:00

  • Interaction of fusogenic synthetic peptide with phospholipid bilayers: orientation of the peptide alpha-helix and binding isotherm.

    abstract::We studied the binding characteristics of a synthetic 20-residue peptide to supported single planar bilayers of phosphatidylcholine, and the orientation of the peptide by Fourier-transform infrared spectroscopy with an attenuated total reflection method. This peptide, designed to resemble a putative fusion peptide of ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952547+

    authors: Ishiguro R,Matsumoto M,Takahashi S

    更新日期:1996-04-16 00:00:00

  • Effect of pressure on deuterium isotope effects of yeast alcohol dehydrogenase: evidence for mechanical models of catalysis.

    abstract::Moderate pressure accelerates hydride transfer catalyzed by yeast alcohol dehydrogenase, indicative of a large negative volume of activation [Cho and Northrop (1999) Biochemistry 38, 7470-7475]. A comparison of the effects of pressure on the oxidation of normal versus dideuteriobenzyl alcohol generates a monophasic de...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992537z

    authors: Northrop DB,Cho YK

    更新日期:2000-03-07 00:00:00

  • Surface-enhanced resonance raman scattering spectroscopy of bacterial photosynthetic membranes: orientation of the carotenoids of Rhodobacter sphaeroides 2.4.1.

    abstract::Surface-enhanced resonance Raman scattering (SERRS) spectra were obtained from carotenoids, in the all-trans configuration, located on the antenna complexes of Rhodobacter sphaeroides 2.4.1 membranes. Since resonance Raman (RR) spectra are barely detectable at the concentration that SERRS signals saturate, SERRS repre...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00455a017

    authors: Picorel R,Lu T,Holt RE,Cotton TM,Seibert M

    更新日期:1990-01-23 00:00:00