Conserved phosphoprotein interaction motif is functionally interchangeable between ataxin-7 and arrestins.

Abstract:

:Olivopontocerebellar atrophy with retinal degeneration is a hereditary neurodegenerative disorder that belongs to the subtype II of the autosomal dominant cerebellar ataxias and is characterized by early-onset cerebellar and macular degeneration preceded by diagnostically useful tritan colorblindness. The gene mutated in the disease (SCA7) has been mapped to chromosome 3p12-13.5, and positional cloning identified the cause of the disease as CAG repeat expansion in this gene. The SCA7 gene product, ataxin-7, is an 897 amino acid protein with an expandable polyglutamine tract close to its N-terminus. No clues to ataxin-7 function have been obtained from sequence database searches. Here we report that ataxin-7 has a motif of ca. 50 amino acids, related to the phosphate-binding site of arrestins. To test the relevance of this sequence similarity, we introduced the putative ataxin-7 phosphate-binding site into visual arrestin and beta-arrestin. Both chimeric arrestins retain receptor-binding affinity and show characteristic high selectivity for phosphorylated activated forms of rhodopsin and beta-adrenergic receptor, respectively. Although the insertion of a Gly residue (absent in arrestins but present in the putative phosphate-binding site of ataxin-7) disrupts the function of visual arrestin-ataxin-7 chimera, it enhances the function of beta-arrestin-ataxin-7 chimera. Taken together, our data suggest that the arrestin-like site in the ataxin-7 sequence is a functional phosphate-binding site. The presence of the phosphate-binding site in ataxin-7 suggests that this protein may be involved in phosphorylation-dependent binding to its protein partner(s) in the cell.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Mushegian AR,Vishnivetskiy SA,Gurevich VV

doi

10.1021/bi992694y

subject

Has Abstract

pub_date

2000-06-13 00:00:00

pages

6809-13

issue

23

eissn

0006-2960

issn

1520-4995

pii

bi992694y

journal_volume

39

pub_type

杂志文章
  • Solution structure and dynamics of the functional domain of Paracoccus denitrificans cytochrome c(552) in both redox states.

    abstract::A soluble and fully functional 10.5 kDa fragment of the 18.2 kDa membrane-bound cytochrome c(552) from Paracoccus denitrificans has been heterologously expressed and (13)C/(15)N-labeled to study the structural features of this protein in both redox states. Well-resolved solution structures of both the reduced and oxid...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi010615o

    authors: Reincke B,Pérez C,Pristovsek P,Lücke C,Ludwig C,Löhr F,Rogov VV,Ludwig B,Rüterjans H

    更新日期:2001-10-16 00:00:00

  • Identification of the catalytic residue of Thermococcus litoralis 4-alpha-glucanotransferase through mechanism-based labeling.

    abstract::Thermococcus litoralis 4-alpha-glucanotransferase (TLGT) belongs to family 57 of glycoside hydrolases and catalyzes the disproportionation and cycloamylose synthesis reactions. Family 57 glycoside hydrolases have not been well investigated, and even the catalytic mechanism involving the active site residues has not be...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011017c

    authors: Imamura H,Fushinobu S,Jeon BS,Wakagi T,Matsuzawa H

    更新日期:2001-10-16 00:00:00

  • Identification of topaquinone and its consensus sequence in copper amine oxidases.

    abstract::The nature of the active site cofactor and the amino acid sequence flanking this structure have been determined in a range of copper amine oxidases. For enzymes from porcine plasma, porcine kidney, and pea seedlings, proteolytic digestion was performed on phenylhydrazone or p-nitrophenylhydrazone derivatives. Thermoly...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00163a025

    authors: Janes SM,Palcic MM,Scaman CH,Smith AJ,Brown DE,Dooley DM,Mure M,Klinman JP

    更新日期:1992-12-08 00:00:00

  • Crystal structures of thrombin complexed to a novel series of synthetic inhibitors containing a 5,5-trans-lactone template.

    abstract::The binding modes of four active site-directed, acylating inhibitors of human alpha-thrombin have been determined using X-ray crystallography. These inhibitors (GR157368, GR166081, GR167088, and GR179849) are representatives of a series utilizing a novel 5, 5-trans-lactone template to specifically acylate Ser195 of th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9830359

    authors: Jhoti H,Cleasby A,Reid S,Thomas PJ,Weir M,Wonacott A

    更新日期:1999-06-22 00:00:00

  • Formation of a trypsin-borate-4-aminobutanol ternary complex.

    abstract::The formation of ternary complexes involving serine proteases, borate, and an alcohol has important implications for understanding the physiological actions of borate and for the development of tight binding inhibitors for this class of enzymes. Recent studies of a related enzyme, gamma-glutamyl transpeptidase, which ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi025583z

    authors: London RE,Gabel SA

    更新日期:2002-05-14 00:00:00

  • Structure of the cytoplasmic loop between putative helices II and III of the mannitol permease of Escherichia coli: a tryptophan and 5-fluorotryptophan spectroscopy study.

    abstract::In this work, four single tryptophan (Trp) mutants of the dimeric mannitol transporter of Escherichia coli, EII(mtl), are characterized using Trp and 5-fluoroTrp (5-FTrp) fluorescence spectroscopy. The four positions, 97, 114, 126, and 133, are located in a region shown by recent studies to be involved in the mannitol...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi8020668

    authors: Vos EP,Bokhove M,Hesp BH,Broos J

    更新日期:2009-06-16 00:00:00

  • Growth factor receptor-bound protein 14 undergoes light-dependent intracellular translocation in rod photoreceptors: functional role in retinal insulin receptor activation.

    abstract::Growth factor receptor-bound protein 14 (Grb14) is involved in growth factor receptor tyrosine kinase signaling. Here we report that light causes a major redistribution of Grb14 among the individual subcellular compartments of the retinal rod photoreceptor. Grb14 is localized predominantly to the inner segment, nuclea...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9000062

    authors: Rajala A,Daly RJ,Tanito M,Allen DT,Holt LJ,Lobanova ES,Arshavsky VY,Rajala RV

    更新日期:2009-06-23 00:00:00

  • Molecular basis of reduced albumin synthesis in Morris hepatoma 7777.

    abstract::The level of albumin mRNA in the normal Buffalo rat liver and Morris hepatoma 7777 was compared by molecular hybridization with albumin complementary DNA (cDNA) and translational assays. Albumin mRNA was found to be 10% of the total rat liver poly(A)-containing RNA population but reduced approximately fourfold in the ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00608a028

    authors: Tse TP,Morris HP,Taylor JM

    更新日期:1978-07-25 00:00:00

  • Differences in the unfolding of procerain induced by pH, guanidine hydrochloride, urea, and temperature.

    abstract::The structural and functional aspects along with equilibrium unfolding of procerain, a cysteine protease from Calotropis procera, were studied in solution. The energetic parameters and conformational stability of procerain in different states were also estimated and interpreted. Procerain belongs to the alpha + beta c...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035047m

    authors: Dubey VK,Jagannadham MV

    更新日期:2003-10-28 00:00:00

  • Probing the dark state tertiary structure in the cytoplasmic domain of rhodopsin: proximities between amino acids deduced from spontaneous disulfide bond formation between Cys316 and engineered cysteines in cytoplasmic loop 1.

    abstract::A dark state tertiary structure in the cytoplasmic domain of rhodopsin is presumed to be the key to the restriction of binding of transducin and rhodopsin kinase to rhodopsin. Upon light-activation, this tertiary structure undergoes a conformational change to form a new structure, which is recognized by the above prot...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi010746p

    authors: Klein-Seetharaman J,Hwa J,Cai K,Altenbach C,Hubbell WL,Khorana HG

    更新日期:2001-10-23 00:00:00

  • Hemagglutinins from two influenza virus variants bind to sialic acid derivatives with millimolar dissociation constants: a 500-MHz proton nuclear magnetic resonance study.

    abstract::The equilibrium binding of influenza virus hemagglutinin to derivatives of its cell-surface ligand, sialic acid, was measured by nuclear magnetic resonance (NMR) spectroscopy. Binding was quantified by observing perturbations of sialic acid resonances in the presence of protein. The major perturbation observed was a c...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00447a018

    authors: Sauter NK,Bednarski MD,Wurzburg BA,Hanson JE,Whitesides GM,Skehel JJ,Wiley DC

    更新日期:1989-10-17 00:00:00

  • Quantitative analysis of lipid-lipid and lipid-protein interactions in membranes by use of pyrene-labeled phosphoinositides.

    abstract::The lateral and rotational dynamics of phosphoinositides and their interactions with proteins were characterized using pyrene-labeled lipid analogues. In these systems, the collision frequency of pyrene-labeled lipids was studied by monitoring the monomeric pyrene fluorescence yield as a function of their mole fractio...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00028a022

    authors: Pap EH,Hanicak A,van Hoek A,Wirtz KW,Visser AJ

    更新日期:1995-07-18 00:00:00

  • Water in the active site of ketosteroid isomerase.

    abstract::Classical molecular dynamics simulations were utilized to investigate the structural and dynamical properties of water in the active site of ketosteroid isomerase (KSI) to provide insight into the role of these water molecules in the enzyme-catalyzed reaction. This reaction is thought to proceed via a dienolate interm...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi200703y

    authors: Hanoian P,Hammes-Schiffer S

    更新日期:2011-08-09 00:00:00

  • Exchange of histidine spacing between Sp1 and GLI zinc fingers: distinct effect of histidine spacing-linker region on DNA binding.

    abstract::In the DNA recognition mode of C(2)H(2)-type zinc fingers, the finger-finger connection region, consisting of the histidine spacing (HX(3-5)H) and linker, would be important for determining the orientation of the zinc finger domains. To clarify the influence of spacing between two ligand histidines in the DNA binding,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035999s

    authors: Shiraishi Y,Imanishi M,Sugiura Y

    更新日期:2004-05-25 00:00:00

  • Interdomain Linker Determines Primarily the Structural Stability of Dystrophin and Utrophin Tandem Calponin-Homology Domains Rather than Their Actin-Binding Affinity.

    abstract::Tandem calponin-homology (CH) domains are the most common actin-binding domains in proteins. However, structural principles underlying their function are poorly understood. These tandem domains exist in multiple conformations with varying degrees of inter-CH-domain interactions. Dystrophin and utrophin tandem CH domai...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.5b00741

    authors: Bandi S,Singh SM,Mallela KM

    更新日期:2015-09-08 00:00:00

  • Human sterol carrier protein x/sterol carrier protein 2 gene has two promoters.

    abstract::The human sterol carrier protein x (SCPx)/sterol carrier protein 2 (SCP2) gene gives rise to two mRNAs: a 2.8 kb mRNA encoding SCPx, a peroxisome-associated thiolase, and a 1.5 kb mRNA encoding SCP2, which is thought to be an intracellular lipid transfer protein. The SCPx/SCP2 gene is highly expressed in organs involv...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00033a042

    authors: Ohba T,Holt JA,Billheimer JT,Strauss JF 3rd

    更新日期:1995-08-22 00:00:00

  • Single-amino acid substitutions alter the specificity and affinity of PDZ domains for their ligands.

    abstract::PDZ domains are modular protein-protein interaction domains that bind to specific C-terminal sequences of membrane proteins and/or to other PDZ domains. Certain PDZ domains in PSD-95 and syntrophins interact with C-terminal peptide ligands and heterodimerize with the extended nNOS PDZ domain. The capacity to interact ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi001633t

    authors: Gee SH,Quenneville S,Lombardo CR,Chabot J

    更新日期:2000-11-28 00:00:00

  • Conformational changes in human hepatitis C virus NS3 protease upon binding of product-based inhibitors.

    abstract::One of the most promising approaches to anti-hepatitis C virus drug discovery is the development of inhibitors of the virally encoded protease NS3. This chymotrypsin-like serine protease is essential for the maturation of the viral polyprotein, and processing requires complex formation between NS3 and its cofactor NS4...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi991220w

    authors: Bianchi E,Orrù S,Dal Piaz F,Ingenito R,Casbarra A,Biasiol G,Koch U,Pucci P,Pessi A

    更新日期:1999-10-19 00:00:00

  • Insight into the mechanism of phosphoenolpyruvate mutase catalysis derived from site-directed mutagenesis studies of active site residues.

    abstract::PEP mutase catalyzes the conversion of phosphoenolpyruvate (PEP) to phosphonopyruvate in biosynthetic pathways leading to phosphonate secondary metabolites. A recent X-ray structure [Huang, K., Li, Z., Jia, Y., Dunaway-Mariano, D., and Herzberg, O. (1999) Structure (in press)] of the Mytilus edulis enzyme complexed wi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi990771j

    authors: Jia Y,Lu Z,Huang K,Herzberg O,Dunaway-Mariano D

    更新日期:1999-10-26 00:00:00

  • Inhibition of gene expression and cell proliferation by triple helix-forming oligonucleotides directed to the c-myc gene.

    abstract::Triple helix-forming oligonucleotides (TFOs) bind with high affinity and specificity to homopurine-homopyrimidine sequences in DNA and have been shown to inhibit transcription of target genes in various experimental systems. In the present study, we evaluated the ability of 3'-amino-modified phosphodiester TFOs direct...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992185w

    authors: Catapano CV,McGuffie EM,Pacheco D,Carbone GM

    更新日期:2000-05-02 00:00:00

  • Iterative optimization of high-affinity protease inhibitors using phage display. 2. Plasma kallikrein and thrombin.

    abstract::As discussed in the accompanying paper [Markland, W., Ley, A. C., & Ladner, R. C. (1996) Biochemistry 35, 8045-8057], we generated libraries from the first Kunitz domain of human lipoprotein-associated coagulation inhibitor (LACI-D1) using multivalent M13 III display and derived potent inhibitors of human plasmin (PLA...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952629y

    authors: Markland W,Ley AC,Ladner RC

    更新日期:1996-06-18 00:00:00

  • General peroxidase activity of G-quadruplex-hemin complexes and its application in ligand screening.

    abstract::DNA sequences with repetitive G-rich structural motifs, which form special structures called G-quadruplexes, widely exist in the human genome. Here we report the general peroxidase activity of G-quadruplex-hemin complexes and discuss the connection between peroxidase activity and G-quadruplex structures. The high pero...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9006786

    authors: Cheng X,Liu X,Bing T,Cao Z,Shangguan D

    更新日期:2009-08-25 00:00:00

  • Influence of monovalent cation identity on parvalbumin divalent ion-binding properties.

    abstract::Rat alpha- and beta-parvalbumins have distinct monovalent cation-binding properties [Henzl et al. (2000) Biochemistry 39, 5859-5867]. Beta binds two Na(+) or one K(+), and alpha binds one Na(+) and no K(+). Ca(2+) abolishes these binding events, suggesting that the monovalent ions occupy the EF-hand motifs. This study...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi035890k

    authors: Henzl MT,Larson JD,Agah S

    更新日期:2004-03-16 00:00:00

  • Influence of an extrinsic cross-link on the folding pathway of ribonuclease A. Kinetics of folding-unfolding.

    abstract::The kinetics of folding/unfolding of cross-linked Lys7-dinitrophenylene-Lys41-ribonuclease A were studied and compared to those of unmodified ribonuclease A (RNase A) at various concentrations of guanidine hydrochloride. The folding of the denatured cross-linked protein involved one fast-folding species (22 +/- 4%) an...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00332a013

    authors: Lin SH,Konishi Y,Nall BT,Scheraga HA

    更新日期:1985-05-21 00:00:00

  • Secondary binding sites for triplex-forming oligonucleotides containing bulges, loops, and mismatches in the third strand.

    abstract::We have used DNase I footprinting to examine the binding of five different 17-mer oligonucleotides to a 53-base oligopurine tract containing four pyrimidine interruptions. Although all the expected triplexes formed with high affinity (K(d) approximately 10-50 nM), one oligonucleotide produced a footprint at a second s...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi992773+

    authors: Fox KR,Flashman E,Gowers D

    更新日期:2000-06-06 00:00:00

  • Importance of the region around glycine-338 for the activity of enzyme I of the Escherichia coli phosphoenolpyruvate:sugar phosphotransferase system.

    abstract::The gene encoding enzyme I of the phosphoenolpyruvate:sugar phosphotransferase system from an Escherichia coli enzyme I mutant was cloned and sequenced. The mutation was shown to be a guanine to adenine transition resulting in an altered protein in which glycine-338 was replaced by aspartic acid. The enzyme I structur...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi952052k

    authors: Seok YJ,Lee BR,Gazdar C,Svenson I,Yadla N,Peterkofsky A

    更新日期:1996-01-09 00:00:00

  • Energy-transfer dynamics in three light-harvesting mutants of Rhodobacter sphaeroides: a picosecond spectroscopy study.

    abstract::Picosecond absorption spectroscopy has been used to investigate energy-transfer dynamics within the LH1 and LH2 light-harvesting complexes of three mutants of Rhodobacter sphaeroides. We demonstrate that both complexes are inhomogeneous; each contains a specialized pigment pool which absorbs maximally at a longer wave...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00465a008

    authors: Hunter CN,Bergström H,van Grondelle R,Sundström V

    更新日期:1990-04-03 00:00:00

  • Aggregation-induced activation of the epidermal growth factor receptor protein tyrosine kinase.

    abstract::Various agents are able to stimulate the EGF receptor protein tyrosine kinase in the absence of ligand binding. To characterize their mechanism of action, we investigated their effects on the kinase activity of the intracellular domain of the EGF receptor (EGFR-IC). EGFR-IC (67 kDa) lacking the extracellular domain an...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00085a004

    authors: Mohammadi M,Honegger A,Sorokin A,Ullrich A,Schlessinger J,Hurwitz DR

    更新日期:1993-08-31 00:00:00

  • Distribution of shape-changing compounds across the red cell membrane.

    abstract::The effects of two oppositely charged pyrene derivatives, 1-pyrenebutyrylcholine (PBC) and 1-pyrenebutyric acid (PBA), on red blood cell shape have been examined. Both compounds convert normal biconcave erythrocytes into echinocytes. However, with extended incubation time at elevated temperature, the morphology of PBC...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00556a002

    authors: Matayoshi ED

    更新日期:1980-07-22 00:00:00

  • Hydrogen-deuterium substitution and solvent effects on the nitrogen-15 nuclear magnetic resonance of gramicidin S: evaluation of secondary structure.

    abstract::Complete assignments of nitrogen-15 resonances of gramicidin S have been made in dimethyl sulfoxide, trifluoroethanol, and in a solvent mixture of dimethyl sulfoxide (50%) and methanol (50%). The assignments are achieved by utilizing the secondary structure of gramicidin S, by comparing the nitrogen-15 spectrum of gra...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00606a005

    authors: Khaled MA,Urry DW,Sugano H,Miyoshi M,Izumiya N

    更新日期:1978-06-27 00:00:00