Poly(ADP-ribose) Polymerase 1 (PARP1) restrains MyoD-dependent gene expression during muscle differentiation.

Abstract:

:The myogenic factor MyoD regulates skeletal muscle differentiation by interacting with a variety of chromatin-modifying complexes. Although MyoD can induce and maintain chromatin accessibility at its target genes, its binding and trans-activation ability can be limited by some types of not fully characterized epigenetic constraints. In this work we analysed the role of PARP1 in regulating MyoD-dependent gene expression. PARP1 is a chromatin-associated enzyme, playing a well recognized role in DNA repair and that is implicated in transcriptional regulation. PARP1 affects gene expression through multiple mechanisms, often involving the Poly(ADP-ribosyl)ation of chromatin proteins. In line with PARP1 down-regulation during differentiation, we observed that PARP1 depletion boosts the up-regulation of MyoD targets, such as p57, myogenin, Mef2C and p21, while its re-expression reverts this effect. We also found that PARP1 interacts with some MyoD-binding regions and that its presence, independently of the enzymatic activity, interferes with MyoD recruitment and gene induction. We finally suggest a relationship between the binding of PARP1 and the loss of the activating histone modification H3K4me3 at MyoD-binding regions. This work highlights not only a novel player in the epigenetic control of myogenesis, but also a repressive and catalytic-independent mechanisms by which PARP1 regulates transcription.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Matteini F,Andresini O,Petrai S,Battistelli C,Rossi MN,Maione R

doi

10.1038/s41598-020-72155-8

subject

Has Abstract

pub_date

2020-09-15 00:00:00

pages

15086

issue

1

issn

2045-2322

pii

10.1038/s41598-020-72155-8

journal_volume

10

pub_type

杂志文章
  • In-situ ToF-SIMS analyses of deuterium re-distribution in austenitic steel AISI 304L under mechanical load.

    abstract::Hydrocarbons fuel our economy. Furthermore, intermediate goods and consumer products are often hydrocarbon-based. Beside all the progress they made possible, hydrogen-containing substances can have severe detrimental effects on materials exposed to them. Hydrogen-assisted failure of iron alloys has been recognised mor...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-60370-2

    authors: Röhsler A,Sobol O,Hänninen H,Böllinghaus T

    更新日期:2020-02-27 00:00:00

  • Leveraging Signatures of Plant Functional Strategies in Wood Density Profiles of African Trees to Correct Mass Estimations From Terrestrial Laser Data.

    abstract::Wood density (WD) relates to important tree functions such as stem mechanics and resistance against pathogens. This functional trait can exhibit high intraindividual variability both radially and vertically. With the rise of LiDAR-based methodologies allowing nondestructive tree volume estimations, failing to account ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-58733-w

    authors: Momo ST,Ploton P,Martin-Ducup O,Lehnebach R,Fortunel C,Sagang LBT,Boyemba F,Couteron P,Fayolle A,Libalah M,Loumeto J,Medjibe V,Ngomanda A,Obiang D,Pélissier R,Rossi V,Yongo O,PREREDD Collaborators.,Sonké B,Barbier N

    更新日期:2020-02-06 00:00:00

  • Systems approach to characterize the metabolism of liver cancer stem cells expressing CD133.

    abstract::Liver cancer stem cells (LCSCs) have attracted attention because they cause therapeutic resistance in hepatocellular carcinoma (HCC). Understanding the metabolism of LCSCs can be a key to developing therapeutic strategy, but metabolic characteristics have not yet been studied. Here, we systematically analyzed and comp...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep45557

    authors: Hur W,Ryu JY,Kim HU,Hong SW,Lee EB,Lee SY,Yoon SK

    更新日期:2017-04-03 00:00:00

  • Modes Coupling Analysis of Surface Plasmon Polaritons Based Resonance Manipulation in Infrared Metamaterial Absorber.

    abstract::Surface plasmon polaritons (SPPs) and standing wave modes provide interesting and exotic properties for infrared metamaterial absorbers. Coupling of these modes promises further development in this field but restricted by the complexity of modes analysis. In this work, we investigate the general phenomenon of modes co...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep46093

    authors: Zhen G,Zhou P,Luo X,Xie J,Deng L

    更新日期:2017-04-11 00:00:00

  • Wild chimpanzees (Pan troglodytes troglodytes) exploit tortoises (Kinixys erosa) via percussive technology.

    abstract::Chimpanzees (Pan troglodytes), one of humankinds' closest living relatives, are known to hunt and consume the meat of various animal taxa. Although some researchers have presented indirect evidence that chimpanzees may also prey on tortoises, until now, direct observations of this behaviour did not exist. Here, we pro...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-43301-8

    authors: Pika S,Klein H,Bunel S,Baas P,Théleste E,Deschner T

    更新日期:2019-05-23 00:00:00

  • Lamina Cribrosa Morphology Predicts Progressive Retinal Nerve Fiber Layer Loss In Eyes with Suspected Glaucoma.

    abstract::Although early diagnosis and treatment reduce the risk of blindness from glaucoma, the decision on whether or not to begin treatment in patients with suspected glaucoma is often a dilemma because the majority of patients never develop definite glaucoma. A growing body of evidences suggests that posterior bowing of the...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-17843-8

    authors: Kim JA,Kim TW,Weinreb RN,Lee EJ,Girard MJA,Mari JM

    更新日期:2018-01-15 00:00:00

  • Cofilin dysregulation alters actin turnover in frataxin-deficient neurons.

    abstract::Abnormalities in actin cytoskeleton have been linked to Friedreich's ataxia (FRDA), an inherited peripheral neuropathy characterised by an early loss of neurons in dorsal root ganglia (DRG) among other clinical symptoms. Despite all efforts to date, we still do not fully understand the molecular events that contribute...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-62050-7

    authors: Muñoz-Lasso DC,Mollá B,Calap-Quintana P,García-Giménez JL,Pallardo FV,Palau F,Gonzalez-Cabo P

    更新日期:2020-03-23 00:00:00

  • Sporadic colon cancer murine models demonstrate the value of autoantibody detection for preclinical cancer diagnosis.

    abstract::Although autoantibody detection has been proposed for diagnosis of colorectal cancer, little is known about their initial production and development correlation with cancer progression. Azoxymethane/dextran sodium sulfate (AOM/DSS)-treated mice developed colon adenocarcinoma in the distal colon similar to human sporad...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep02938

    authors: Barderas R,Villar-Vázquez R,Fernández-Aceñero MJ,Babel I,Peláez-García A,Torres S,Casal JI

    更新日期:2013-10-15 00:00:00

  • Wide-field imaging and flow cytometric analysis of cancer cells in blood by fluorescent nanodiamond labeling and time gating.

    abstract::Nanodiamonds containing high density ensembles of negatively charged nitrogen-vacancy (NV(-)) centers are promising fluorescent biomarkers due to their excellent photostability and biocompatibility. The NV(-) centers in the particles have a fluorescence lifetime of up to 20 ns, which distinctly differs from those (<10...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep05574

    authors: Hui YY,Su LJ,Chen OY,Chen YT,Liu TM,Chang HC

    更新日期:2014-07-04 00:00:00

  • Nanoparticle architecture preserves magnetic properties during coating to enable robust multi-modal functionality.

    abstract::Magnetic iron oxide nanoparticles (MIONs) have established a niche as a nanomedicine platform for diagnosis and therapy, but they present a challenging surface for ligand functionalization which limits their applications. On the other hand, coating MIONs with another material such as gold to enhance these attachments ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-29711-0

    authors: Woodard LE,Dennis CL,Borchers JA,Attaluri A,Velarde E,Dawidczyk C,Searson PC,Pomper MG,Ivkov R

    更新日期:2018-08-23 00:00:00

  • HCV RNA Activates APCs via TLR7/TLR8 While Virus Selectively Stimulates Macrophages Without Inducing Antiviral Responses.

    abstract::The innate and adaptive immune systems fail to control HCV infection in the majority of infected individuals. HCV is an ssRNA virus, which suggests a role for Toll-like receptors (TLRs) 7 and 8 in initiating the anti-viral response. Here we demonstrate that HCV genomic RNA harbours specific sequences that initiate an ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29447

    authors: Zhang Y,El-Far M,Dupuy FP,Abdel-Hakeem MS,He Z,Procopio FA,Shi Y,Haddad EK,Ancuta P,Sekaly RP,Said EA

    更新日期:2016-07-07 00:00:00

  • Trivalent soluble TNF Receptor, a potent TNF-α antagonist for the treatment collagen-induced arthritis.

    abstract::Tumor necrosis factor is a major pro-inflammatory cytokine which triggers various physiological consequences by binding to and trimerizing its receptors, and has been the single most sought-after drug target for intervening autoimmune diseases such as rheumatoid arthritis and psoriasis. However, current TNF-α blockers...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-25652-w

    authors: Cui X,Chang L,Li Y,Lv Q,Wang F,Lin Y,Li W,Meade JD,Walden JC,Liang P

    更新日期:2018-05-09 00:00:00

  • Fracturing in coals with different fluids: an experimental comparison between water, liquid CO2, and supercritical CO2.

    abstract::The present work conducted laboratory experiments of fracturing in fat coals, anthracites, and mudstones. Three different fluids were selected as the fracturing fluids, including water, liquid CO2 (L-CO2), and supercritical CO2 (Sc-CO2). The resulting fracture morphologies and fracture apertures of the coal specimens ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-75787-y

    authors: Yang J,Lian H,Li L

    更新日期:2020-10-29 00:00:00

  • Caveolae-mediated albumin transcytosis is enhanced in dengue-infected human endothelial cells: A model of vascular leakage in dengue hemorrhagic fever.

    abstract::Vascular leakage is a life-threatening complication of dengue virus (DENV) infection. Previously, association between "paracellular" endothelial hyperpermeability and plasma leakage had been extensively investigated. However, whether "transcellular" endothelial leakage is involved in dengue hemorrhagic fever (DHF) and...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep31855

    authors: Chanthick C,Kanlaya R,Kiatbumrung R,Pattanakitsakul SN,Thongboonkerd V

    更新日期:2016-08-22 00:00:00

  • Convolutional Neural Networks enable efficient, accurate and fine-grained segmentation of plant species and communities from high-resolution UAV imagery.

    abstract::Recent technological advances in remote sensing sensors and platforms, such as high-resolution satellite imagers or unmanned aerial vehicles (UAV), facilitate the availability of fine-grained earth observation data. Such data reveal vegetation canopies in high spatial detail. Efficient methods are needed to fully harn...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-53797-9

    authors: Kattenborn T,Eichel J,Fassnacht FE

    更新日期:2019-11-27 00:00:00

  • Observation of magnetic skyrmions in unpatterned symmetric multilayers at room temperature and zero magnetic field.

    abstract::Magnetic skyrmions are promising candidates for the next generation of spintronic devices due to their small size and topologically protected structure. One challenge for using these magnetic states in applications lies on controlling the nucleation process and stabilization that usually requires an external force. He...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-40705-4

    authors: Brandão J,Dugato DA,Seeger RL,Denardin JC,Mori TJA,Cezar JC

    更新日期:2019-03-11 00:00:00

  • Engineering the hinge region of human IgG1 Fc-fused bispecific antibodies to improve fragmentation resistance.

    abstract::Fc domain fusion can improve the therapeutic effects of relatively small biological molecules such as peptides, cytokines, and antibody fragments. Fc fusion proteins can also be used to enhance the cytotoxic effects of small bispecific antibodies (bsAbs). However, fragmentation of Fc fusion proteins, which mainly occu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-35489-y

    authors: Suzuki S,Annaka H,Konno S,Kumagai I,Asano R

    更新日期:2018-11-22 00:00:00

  • Health effect of agricultural pesticide use in China: implications for the development of GM crops.

    abstract::It is notable that the adoption of GM glyphosate-tolerant crops increases glyphosate use but reduces non-glyphosate herbicide use; and adoption of GM insect-resistant crops significantly reduces insecticide use. While the health hazard of pesticide use has been well documented, little literature evaluates the health e...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34918

    authors: Zhang C,Hu R,Huang J,Huang X,Shi G,Li Y,Yin Y,Chen Z

    更新日期:2016-10-10 00:00:00

  • CO2 sorption and regeneration properties of fly ash zeolites synthesized with the use of differentiated methods.

    abstract::Production of fly ash zeolites may be an attractive method for the utilization of solid wastes from the energy sector. Different methods of synthesis often yield a variety of zeolite types, thereby affecting the properties of the resulting materials. The attention paid to carbon dioxide emission reduction technologies...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-58591-6

    authors: Czuma N,Casanova I,Baran P,Szczurowski J,Zarębska K

    更新日期:2020-02-04 00:00:00

  • Updating the genomic taxonomy and epidemiology of Campylobacter hyointestinalis.

    abstract::Campylobacter hyointestinalis is a member of an emerging group of zoonotic Campylobacter spp. that are increasingly identified in both gastric and non-gastric disease in humans. Here, we discovered C. hyointestinalis in three separate classes of New Zealand ruminant livestock; cattle, sheep and deer. To investigate th...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-20889-x

    authors: Wilkinson DA,O'Donnell AJ,Akhter RN,Fayaz A,Mack HJ,Rogers LE,Biggs PJ,French NP,Midwinter AC

    更新日期:2018-02-05 00:00:00

  • Cisplatin bioconjugated enzymatic GNPs amplify the effect of cisplatin with acquiescence.

    abstract::Enzymatic gold nanoparticles (B-GNPs) have been synthesized using a natural anticancer agent bromelain (a cysteine protease) and these nanoparticles were used to bioconjugate Cisplatin (highly effective against osteosarcoma and lung cancer). Cisplatin bioconjugated bromelain encapsulated gold nanoparticles (B-C-GNPs) ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-50215-y

    authors: Iram S,Zahera M,Wahid I,Baker A,Raish M,Khan A,Ali N,Ahmad S,Khan MS

    更新日期:2019-09-25 00:00:00

  • Growth of high quality and uniformity AlGaN/GaN heterostructures on Si substrates using a single AlGaN layer with low Al composition.

    abstract::By employing a single AlGaN layer with low Al composition, high quality and uniformity AlGaN/GaN heterostructures have been successfully grown on Si substrates by metal-organic chemical vapor deposition (MOCVD). The heterostructures exhibit a high electron mobility of 2150 cm(2)/Vs with an electron density of 9.3 × 10...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep23020

    authors: Cheng J,Yang X,Sang L,Guo L,Zhang J,Wang J,He C,Zhang L,Wang M,Xu F,Tang N,Qin Z,Wang X,Shen B

    更新日期:2016-03-10 00:00:00

  • Anti-HERV-WEnv antibodies are correlated with seroreactivity against Mycobacterium avium subsp. paratuberculosis in children and youths at T1D risk.

    abstract::Recent evidence points at the role that human endogenous retroviruses (HERVs) may play through the activation of genes integrated across the human genome. Although a variety of genetic/epigenetic mechanisms maintain most HERVs silenced, independent environmental stimuli including infections may transactivate endogenou...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-42788-5

    authors: Niegowska M,Wajda-Cuszlag M,Stępień-Ptak G,Trojanek J,Michałkiewicz J,Szalecki M,Sechi LA

    更新日期:2019-04-18 00:00:00

  • Machine Learning and Network Analyses Reveal Disease Subtypes of Pancreatic Cancer and their Molecular Characteristics.

    abstract::Given that the biological processes governing the oncogenesis of pancreatic cancers could present useful therapeutic targets, there is a pressing need to molecularly distinguish between different clinically relevant pancreatic cancer subtypes. To address this challenge, we used targeted proteomics and other molecular ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-58290-2

    authors: Sinkala M,Mulder N,Martin D

    更新日期:2020-01-27 00:00:00

  • Aberrant SSEA-4 upregulation mediates myofibroblast activity to promote pre-cancerous oral submucous fibrosis.

    abstract::Oral submucous fibrosis (OSF), regarded as a precancerous condition, is characterized by juxta-epithelial inflammatory reaction followed by fibro-elastic change in the lamina properia and epithelial atrophy. The pathologic mechanisms of OSF still need to be further clarified. In the study, we investigated the function...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep37004

    authors: Yu CC,Yu CH,Chang YC

    更新日期:2016-11-15 00:00:00

  • Lipoprotein-associated Phospholipase A2 Is Associated with Risk of Mild Cognitive Impairment in Chinese Patients with Type 2 Diabetes.

    abstract::Type 2 diabetes mellitus (T2DM) is a low-grade chronic inflammatory diseases, which have been implicated in the pathogenesis of cognitive decline. We aim to evaluate associations between inflammatory markers and the risk of mild cognitive impairment (MCI) in T2DM. This study of 140 diabetic patients involved 71 with M...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-12515-z

    authors: Cai R,Huang R,Han J,Sun H,Sun J,Xia W,Tian S,Dong X,Shen Y,Wang S

    更新日期:2017-09-26 00:00:00

  • Relationship between dental and periodontal health status and the salivary microbiome: bacterial diversity, co-occurrence networks and predictive models.

    abstract::The present study used 16S rRNA gene amplicon sequencing to assess the impact on salivary microbiome of different grades of dental and periodontal disease and the combination of both (hereinafter referred to as oral disease), in terms of bacterial diversity, co-occurrence network patterns and predictive models. Our sc...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-79875-x

    authors: Relvas M,Regueira-Iglesias A,Balsa-Castro C,Salazar F,Pacheco JJ,Cabral C,Henriques C,Tomás I

    更新日期:2021-01-13 00:00:00

  • Structural and functional characterization of M. tuberculosis sedoheptulose- 7-phosphate isomerase, a critical enzyme involved in lipopolysaccharide biosynthetic pathway.

    abstract::M. tuberculosis GmhA enzyme catalyzes the isomerization of D-sedoheptulose 7-phosphate into D-glycero-D-α-manno-heptose-7-phosphate in GDP-D-glycero-α-D-manno-heptose biosynthetic pathway. The D-glycero-α-D-manno-heptose is a major constituent of lipopolysaccharide and contributes to virulence and antibiotic resistanc...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-77230-8

    authors: Karan S,Pratap B,Yadav SP,Ashish F,Saxena AK

    更新日期:2020-11-30 00:00:00

  • Magnetic Nanoparticle-Reduced Graphene Oxide Nanocomposite as a Novel Bioelectrode for Mediatorless-Membraneless Glucose Enzymatic Biofuel Cells.

    abstract::In this work, an enzymatic biofuel cell (EBC) based on a membraneless and mediatorless glucose enzymatic fuel cell system was constructed for operation in physiological conditions (pH 7.0 and temperature 37 °C). The new platform EBC made of nanocomposite, including magnetic nanoparticles (Fe3O4 NPs) and reduced graphe...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-12417-0

    authors: Pakapongpan S,Tuantranont A,Poo-Arporn RP

    更新日期:2017-10-10 00:00:00

  • Molecular characterization of woodchuck IFI16 and AIM2 and their expression in woodchucks infected with woodchuck hepatitis virus (WHV).

    abstract::IFI16 and AIM2 are important DNA sensors in antiviral immunity. To characterize these two molecules in a woodchuck model, which is widely used to study hepatitis B virus (HBV) infection, we cloned and analyzed the complete coding sequences (CDSs) of woodchuck IFI16 and AIM2, and found that AIM2 was highly conserved in...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep28776

    authors: Yan Q,Li M,Liu Q,Li F,Zhu B,Wang J,Lu Y,Liu J,Wu J,Zheng X,Lu M,Wang B,Yang D

    更新日期:2016-06-29 00:00:00