A perspective on crassulacean acid metabolism photosynthesis evolution of orchids on different continents: Dendrobium as a case study.

Abstract:

:Members of the Orchidaceae, one of the largest families of flowering plants, evolved the crassulacean acid metabolism (CAM) photosynthesis strategy. It is thought that CAM triggers adaptive radiation into new niche spaces, yet very little is known about its origin and diversification on different continents. Here, we assess the prevalence of CAM in Dendrobium, which is one of the largest genera of flowering plants and found in a wide range of environments, from the high altitudes of the Himalayas to relatively arid habitats in Australia. Based on phylogenetic time trees, we estimated that CAM, as determined by δ 13C values less negative than -20.0‰, evolved independently at least eight times in Dendrobium. The oldest lineage appeared in the Asian clade during the middle Miocene, indicating the origin of CAM was associated with a pronounced climatic cooling that followed a period of aridity. Divergence of the four CAM lineages in the Asian clade appeared to be earlier than divergence of those in the Australasian clade. However, CAM species in the Asian clade are much less diverse (25.6%) than those in the Australasian clade (57.9%). These findings shed new light on CAM evolutionary history and the aridity levels of the paleoclimate on different continents.

journal_name

J Exp Bot

authors

Li MH,Liu DK,Zhang GQ,Deng H,Tu XD,Wang Y,Lan SR,Liu ZJ

doi

10.1093/jxb/erz461

subject

Has Abstract

pub_date

2019-11-29 00:00:00

pages

6611-6619

issue

22

eissn

0022-0957

issn

1460-2431

pii

5592895

journal_volume

70

pub_type

杂志文章
  • Plasma membrane of Beta vulgaris storage root shows high water channel activity regulated by cytoplasmic pH and a dual range of calcium concentrations.

    abstract::Plasma membrane vesicles isolated by two-phase partitioning from the storage root of Beta vulgaris show atypically high water permeability that is equivalent only to those reported for active aquaporins in tonoplast or animal red cells (Pf=542 microm s(-1)). The values were determined from the shrinking kinetics measu...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erj046

    authors: Alleva K,Niemietz CM,Sutka M,Maurel C,Parisi M,Tyerman SD,Amodeo G

    更新日期:2006-01-01 00:00:00

  • The role of auxin and gibberellin in tomato fruit set.

    abstract::The initiation of tomato fruit growth, fruit set, is very sensitive to environmental conditions. Therefore, an understanding of the mechanisms that regulate this process can facilitate the production of this agriculturally valuable fruit crop. Over the years, it has been well established that tomato fruit set depends ...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/erp094

    authors: de Jong M,Mariani C,Vriezen WH

    更新日期:2009-01-01 00:00:00

  • Drought stress modulates cuticular wax composition of the grape berry.

    abstract::Drought events are a major challenge for many horticultural crops, including grapes, which are often cultivated in dry and warm climates. It is not understood how the cuticle contributes to the grape berry response to water deficit (WD); furthermore, the cuticular waxes and the related biosynthetic pathways are poorly...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eraa046

    authors: Dimopoulos N,Tindjau R,Wong DCJ,Matzat T,Haslam T,Song C,Gambetta GA,Kunst L,Castellarin SD

    更新日期:2020-05-30 00:00:00

  • How agro-ecological research helps to address food security issues under new IPM and pesticide reduction policies for global crop production systems.

    abstract::Drivers behind food security and crop protection issues are discussed in relation to food losses caused by pests. Pests globally consume food estimated to feed an additional one billion people. Key drivers include rapid human population increase, climate change, loss of beneficial on-farm biodiversity, reduction in pe...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/err064

    authors: E Birch AN,Begg GS,Squire GR

    更新日期:2011-06-01 00:00:00

  • Ion transport in seminal and adventitious roots of cereals during O2 deficiency.

    abstract::O(2) deficiency during soil waterlogging inhibits respiration in roots, resulting in severe energy deficits. Decreased root-to-shoot ratio and suboptimal functioning of the roots, result in nutrient deficiencies in the shoots. In N(2)-flushed nutrient solutions, wheat seminal roots cease growth, while newly formed adv...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/erq271

    authors: Colmer TD,Greenway H

    更新日期:2011-01-01 00:00:00

  • Molecular characterization and expression analysis of the Rab GTPase family in Vitis vinifera reveal the specific expression of a VvRabA protein.

    abstract::As a first step to investigate whether Rab GTPases are involved in grape berry development, the Vitis vinifera EST and gene databases were searched for members of the VvRab family. The grapevine genome was found to contain 26 VvRabs that could be distributed into all of the eight groups described in the literature for...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ern132

    authors: Abbal P,Pradal M,Muniz L,Sauvage FX,Chatelet P,Ueda T,Tesniere C

    更新日期:2008-01-01 00:00:00

  • Antisense inhibition of a pectate lyase gene supports a role for pectin depolymerization in strawberry fruit softening.

    abstract::Cell wall disassembly in softening fruits is a complex process involving the cumulative action of many families of wall-modifying proteins on interconnected polysaccharide matrices. One strategy to elucidate the in vivo substrates of specific enzymes and their relative importance and contribution to wall modification ...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ern142

    authors: Santiago-Doménech N,Jiménez-Bemúdez S,Matas AJ,Rose JK,Muñoz-Blanco J,Mercado JA,Quesada MA

    更新日期:2008-01-01 00:00:00

  • Cotton GhMKK5 affects disease resistance, induces HR-like cell death, and reduces the tolerance to salt and drought stress in transgenic Nicotiana benthamiana.

    abstract::Mitogen-activated protein kinase (MAPK) cascades are involved in various processes from plant growth and development to biotic and abiotic stress responses. MAPK kinases (MAPKKs), which link MAPKs and MAPKK kinases (MAPKKKs), play crucial roles in MAPK cascades to mediate a variety of stress responses in plants. Howev...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ers086

    authors: Zhang L,Li Y,Lu W,Meng F,Wu CA,Guo X

    更新日期:2012-06-01 00:00:00

  • Genetic association mapping identifies single nucleotide polymorphisms in genes that affect abscisic acid levels in maize floral tissues during drought.

    abstract::In maize, water stress at flowering causes loss of kernel set and productivity. While changes in the levels of sugars and abscisic acid (ABA) are thought to play a role in this stress response, the mechanistic basis and genes involved are not known. A candidate gene approach was used with association mapping to identi...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erq308

    authors: Setter TL,Yan J,Warburton M,Ribaut JM,Xu Y,Sawkins M,Buckler ES,Zhang Z,Gore MA

    更新日期:2011-01-01 00:00:00

  • Contrast in chloride exclusion between two grapevine genotypes and its variation in their hybrid progeny.

    abstract::Potted grapevines of 140 Ruggeri (Vitis berlandieri × Vitis rupestris), a good Cl(-) excluder, and K 51-40 (Vitis champinii × Vitis riparia 'Gloire'), a poor Cl(-) excluder, and of a family obtained by crossing the two genotypes, were used to examine the inheritance of Cl(-) exclusion. Rooted leaves were then used to ...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erq326

    authors: Gong H,Blackmore D,Clingeleffer P,Sykes S,Jha D,Tester M,Walker R

    更新日期:2011-01-01 00:00:00

  • Functions of two genes in aluminium (Al) stress resistance: repression of oxidative damage by the AtBCB gene and promotion of efflux of Al ions by the NtGDI1gene.

    abstract::The functions of two genes whose expression provides tolerance to aluminium (Al) stress were investigated using plants and Saccharomyces cerevisiae (yeast): the Arabidopsis thaliana blue copper binding gene (AtBCB) and Nicotiana tabacum guanosine diphosphate (GDP) dissociation inhibitor gene (NtGDI1). To determine the...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eri259

    authors: Ezaki B,Sasaki K,Matsumoto H,Nakashima S

    更新日期:2005-10-01 00:00:00

  • The actin cytoskeleton is a target of the self-incompatibility response in Papaver rhoeas.

    abstract::The integration of signals received by a cell, and their transduction to targets, is essential for all cellular responses. The cytoskeleton has been identified as a major target of signalling cascades in both animal and plant cells. Self-incompatibility (SI) in Papaver rhoeas involves an allele-specific recognition be...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/erg003

    authors: Staiger CJ,Franklin-Tong VE

    更新日期:2003-01-01 00:00:00

  • A transcriptomic study of grapevine (Vitis vinifera cv. Cabernet-Sauvignon) interaction with the vascular ascomycete fungus Eutypa lata.

    abstract::Eutypa dieback is a vascular disease that may severely affect vineyards throughout the world. In the present work, microarrays were made in order (i) to improve our knowledge of grapevine (Vitis vinifera cv. Cabernet-Sauvignon) responses to Eutypa lata, the causal agent of Eutypa dieback; and (ii) to identify genes th...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erq040

    authors: Camps C,Kappel C,Lecomte P,Léon C,Gomès E,Coutos-Thévenot P,Delrot S

    更新日期:2010-06-01 00:00:00

  • Maize transcription factor ZmBES1/BZR1-5 positively regulates kernel size.

    abstract::The BES1/BZR1 transcription factors regulate the expression of brassinosteroid responsive genes and play pivotal roles in plant development. However, the function of BES1/BZR1 regulating kernel development remains unclear. In this study, maize ZmBES1/BZR1-5 is found to positively regulate kernel size. Candidate-gene a...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eraa544

    authors: Sun F,Ding L,Feng W,Cao Y,Lu F,Yang Q,Li W,Lu Y,Shabek N,Fu F,Yu H

    更新日期:2020-11-18 00:00:00

  • An Arabidopsis gene encoding a C2H2-domain protein with alternatively spliced transcripts is essential for endosperm development.

    abstract::The endosperm is an essential part of the seed which sustains embryo development and contains storage reserves. Endosperm development involves a series of nuclear divisions in the absence of cytokinesis. In this study, it is shown that a mutant Arabidopsis plant carrying the disrupted At4g24900 gene exhibits severe de...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ers243

    authors: Lu X,Li Y,Su Y,Liang Q,Meng H,Li S,Shen S,Fan Y,Zhang C

    更新日期:2012-10-01 00:00:00

  • Overexpression of mitochondrial uncoupling protein 1 (UCP1) induces a hypoxic response in Nicotiana tabacum leaves.

    abstract::Mitochondrial uncoupling protein 1 (UCP1) decreases reactive oxygen species production under stress conditions by uncoupling the electrochemical gradient from ATP synthesis. This study combined transcriptome profiling with experimentally induced hypoxia to mechanistically dissect the impact of Arabidopsis thaliana UCP...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erv460

    authors: Barreto P,Okura V,Pena IA,Maia R,Maia IG,Arruda P

    更新日期:2016-01-01 00:00:00

  • Different ethylene receptors show an increased expression during the ripening of strawberries: does such an increment imply a role for ethylene in the ripening of these non-climacteric fruits?

    abstract::Notwithstanding the economic importance of non-climacteric fruits like grape and strawberry, little is known about the mechanisms that regulate their ripening. Up to now no growth regulator has emerged with a primary role similar to that played by ethylene in the ripening of the climacteric fruits. Strawberries can pr...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eri202

    authors: Trainotti L,Pavanello A,Casadoro G

    更新日期:2005-08-01 00:00:00

  • Functional characterization of the Arabidopsis thaliana orthologue of Tsc13p, the enoyl reductase of the yeast microsomal fatty acid elongating system.

    abstract::The protein encoded by the Arabidopsis At3g55360 gene was selected as a candidate for the enoyl reductase of the microsomal elongase system based on its homology to the Tsc13p protein of S. cerevisiae. The studies presented here demonstrate that heterologous expression of At3g55360 functionally complements the tempera...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erh061

    authors: Gable K,Garton S,Napier JA,Dunn TM

    更新日期:2004-02-01 00:00:00

  • A biophysical model of kiwifruit (Actinidia deliciosa) berry development.

    abstract::A model of kiwifruit berry development is presented, building on the model of Fishman and Génard used for peach fruit. That model has been extended to incorporate a number of important features of kiwifruit growth. First, the kiwifruit berry is attached to the stem through a pedicel/receptacle complex which contribute...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ert317

    authors: Hall AJ,Minchin PE,Clearwater MJ,Génard M

    更新日期:2013-12-01 00:00:00

  • Nitrate, NO and haemoglobin in plant adaptation to hypoxia: an alternative to classic fermentation pathways.

    abstract::The role of nitrate reduction to produce nitric oxide (NO) and its subsequent oxidation by oxyhaemoglobin as a mechanism to maintain plant cell energetics during hypoxia is examined. Nitrate reduction in hypoxic conditions can be considered as an alternative respiratory pathway, with nitrate as an intermediate electro...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/erh272

    authors: Igamberdiev AU,Hill RD

    更新日期:2004-12-01 00:00:00

  • The cyclic nucleotide cGMP is involved in plant hormone signalling and alters phosphorylation of Arabidopsis thaliana root proteins.

    abstract::The cyclic nucleotide cGMP has been shown to play important roles in plant development and responses to abiotic and biotic stress. Yet much controversy remains regarding the exact role of this second messenger. Progress in unravelling cGMP function in plants was hampered by laborious and time-consuming methodology to ...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ers045

    authors: Isner JC,Nühse T,Maathuis FJ

    更新日期:2012-05-01 00:00:00

  • Changes in fatty acid composition during development of tissues of coconut (Cocos nucifera L.) embryos in the intact nut and in vitro.

    abstract::Intact coconuts were germinated in situ and compared with excised zygotic embryos germinated in vitro. The growth of the embryonic tissue and their fatty acid compositions were measured. Haustoria, plumules and radicles of coconuts germinated in situ grew continuously and proportionately throughout the 120 d experimen...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jexbot/52.358.933

    authors: López-Villalobos A,Dodds PF,Hornung R

    更新日期:2001-05-01 00:00:00

  • Soluble methionine enhances accumulation of a 15 kDa zein, a methionine-rich storage protein, in transgenic alfalfa but not in transgenic tobacco plants.

    abstract::With the general aim of elevating the content of the essential amino acid methionine in vegetative tissues of plants, alfalfa (Medicago sativa L.) and tobacco plants, as well as BY2 tobacco suspension cells, were transformed with a beta-zein::3HA gene under the 35S promoter of cauliflower mosaic virus encoding a rumen...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eri237

    authors: Amira G,Ifat M,Tal A,Hana B,Shmuel G,Rachel A

    更新日期:2005-09-01 00:00:00

  • Long-distance signalling from roots to shoots assessed: the flooding story.

    abstract::Several kinds of signal may be generated when roots are exposed to an environmental stress. Some, but not all, are conveyed to shoots in the transpiration stream. Principles are summarized that may help establish experimentally the presence or intensity of root signals transported by transpiration. In many dryland spe...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jexbot/53.367.175

    authors: Jackson MB

    更新日期:2002-02-01 00:00:00

  • Differential feedback regulation of ethylene biosynthesis in pulp and peel tissues of banana fruit.

    abstract::The feedback regulation of ethylene biosynthesis in banana [Musa sp. (AAA group, Cavendish subgroup) cv. Grand Nain] fruit was investigated in an attempt to clarify the opposite effect of 1-methylcyclopropene (1-MCP), an ethylene action inhibitor, before and after the onset of ripening. 1-MCP pre-treatment completely ...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erl265

    authors: Inaba A,Liu X,Yokotani N,Yamane M,Lu WJ,Nakano R,Kubo Y

    更新日期:2007-01-01 00:00:00

  • Mathematical principles and models of plant growth mechanics: from cell wall dynamics to tissue morphogenesis.

    abstract::Plant growth research produces a catalogue of complex open questions. We argue that plant growth is a highly mechanical process, and that mathematics gives an underlying framework with which to probe its fundamental unrevealed mechanisms. This review serves to illustrate the biological insights afforded by mathematica...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/erz253

    authors: Smithers ET,Luo J,Dyson RJ

    更新日期:2019-07-23 00:00:00

  • The IDA-LIKE peptides IDL6 and IDL7 are negative modulators of stress responses in Arabidopsis thaliana.

    abstract::Small signalling peptides have emerged as important cell to cell messengers in plant development and stress responses. However, only a few of the predicted peptides have been functionally characterized. Here, we present functional characterization of two members of the IDA-LIKE (IDL) peptide family in Arabidopsis thal...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erx168

    authors: Vie AK,Najafi J,Winge P,Cattan E,Wrzaczek M,Kangasjärvi J,Miller G,Brembu T,Bones AM

    更新日期:2017-06-15 00:00:00

  • Characterization of ADP-glucose transport across the cereal endosperm amyloplast envelope.

    abstract::Most of the carbon used for starch biosynthesis in cereal endosperms is derived from ADP-glucose (ADP-Glc) synthesized by extra-plastidial AGPase activity, and imported directly across the amyloplast envelope. The properties of the wheat endosperm amyloplast ADP-Glc transporter were analysed with respect to substrate ...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erl297

    authors: Bowsher CG,Scrase-Field EF,Esposito S,Emes MJ,Tetlow IJ

    更新日期:2007-01-01 00:00:00

  • Hemoglobin LjGlb1-1 is involved in nodulation and regulates the level of nitric oxide in the Lotus japonicus-Mesorhizobium loti symbiosis.

    abstract::Leghemoglobins transport and deliver O2 to the symbiosomes inside legume nodules and are essential for nitrogen fixation. However, the roles of other hemoglobins (Hbs) in the rhizobia-legume symbiosis are unclear. Several Lotus japonicus mutants affecting LjGlb1-1, a non-symbiotic class 1 Hb, have been used to study t...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erw290

    authors: Fukudome M,Calvo-Begueria L,Kado T,Osuki K,Rubio MC,Murakami E,Nagata M,Kucho K,Sandal N,Stougaard J,Becana M,Uchiumi T

    更新日期:2016-09-01 00:00:00

  • Duplicate maize 13-lipoxygenase genes are differentially regulated by circadian rhythm, cold stress, wounding, pathogen infection, and hormonal treatments.

    abstract::Most plant oxylipins, a large class of diverse oxygenated polyunsaturated fatty acids and their derivatives, are produced through the lipoxygenase (LOX) pathway. Recent progress in dicots has highlighted the biological roles of oxylipins in plant defence responses to pathogens and pests. By contrast, the physiological...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erl137

    authors: Nemchenko A,Kunze S,Feussner I,Kolomiets M

    更新日期:2006-01-01 00:00:00