Autophagy is involved in assisting the replication of Bamboo mosaic virus in Nicotiana benthamiana.

Abstract:

:Autophagy plays a critical role in plants under biotic stress, including the response to pathogen infection. We investigated whether autophagy-related genes (ATGs) are involved in infection with Bamboo mosaic virus (BaMV), a single-stranded positive-sense RNA virus. Initially, we observed that BaMV infection in Nicotiana benthamiana leaves upregulated the expression of ATGs but did not trigger cell death. The induction of ATGs, which possibly triggers autophagy, increased rather than diminished BaMV accumulation in the leaves, as revealed by gene knockdown and transient expression experiments. Furthermore, the inhibitor 3-methyladenine blocked autophagosome formation and the autophagy inducer rapamycin, which negatively and positively affected BaMV accumulation, respectively. Pull-down experiments with an antibody against orange fluorescent protein (OFP)-NbATG8f, an autophagosome marker protein, showed that both plus- and minus-sense BaMV RNAs could associate with NbATG8f. Confocal microscopy revealed that ATG8f-enriched vesicles possibly derived from chloroplasts contained both the BaMV viral RNA and its replicase. Thus, BaMV infection may induce the expression of ATGs possibly via autophagy to selectively engulf a portion of viral RNA-containing chloroplast. Virus-induced vesicles enriched with ATG8f could provide an alternative site for viral RNA replication or a shelter from the host silencing mechanism.

journal_name

J Exp Bot

authors

Huang YP,Huang YW,Hsiao YJ,Li SC,Hsu YH,Tsai CH

doi

10.1093/jxb/erz244

subject

Has Abstract

pub_date

2019-09-24 00:00:00

pages

4657-4670

issue

18

eissn

0022-0957

issn

1460-2431

pii

5565017

journal_volume

70

pub_type

杂志文章
  • Apoplastic and intracellular plant sugars regulate developmental transitions in witches' broom disease of cacao.

    abstract::Witches' broom disease (WBD) of cacao differs from other typical hemibiotrophic plant diseases by its unusually long biotrophic phase. Plant carbon sources have been proposed to regulate WBD developmental transitions; however, nothing is known about their availability at the plant-fungus interface, the apoplastic flui...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eru485

    authors: Barau J,Grandis A,Carvalho VM,Teixeira GS,Zaparoli GH,do Rio MC,Rincones J,Buckeridge MS,Pereira GA

    更新日期:2015-03-01 00:00:00

  • Making sense of the metabolome using evolutionary computation: seeing the wood with the trees.

    abstract::One should perhaps start off by asking the question, 'But what wood is it we want to see?' There are so many trees that make up the wood; within a post-genomics context, genes, transcripts, proteins, and metabolites are the more tangible ones. Rather than studying these components in isolation, a more holistic approac...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/eri043

    authors: Goodacre R

    更新日期:2005-01-01 00:00:00

  • Role of early signalling events in plant-insect interactions.

    abstract::The response of plants to the stress caused by herbivores involves several different defence mechanisms. These responses begin at the plant cell plasma membrane, where insect herbivores interact physically by causing mechanical damage and chemically by introducing elicitors or by triggering plant-derived signalling mo...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/eru480

    authors: Zebelo SA,Maffei ME

    更新日期:2015-02-01 00:00:00

  • Soluble methionine enhances accumulation of a 15 kDa zein, a methionine-rich storage protein, in transgenic alfalfa but not in transgenic tobacco plants.

    abstract::With the general aim of elevating the content of the essential amino acid methionine in vegetative tissues of plants, alfalfa (Medicago sativa L.) and tobacco plants, as well as BY2 tobacco suspension cells, were transformed with a beta-zein::3HA gene under the 35S promoter of cauliflower mosaic virus encoding a rumen...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eri237

    authors: Amira G,Ifat M,Tal A,Hana B,Shmuel G,Rachel A

    更新日期:2005-09-01 00:00:00

  • Mechanical properties of cuticles and their primary determinants.

    abstract::Cuticles envelope primary surfaces of the above-ground portion of plants. They function as barriers to water movement and to gas exchange, and in pathogen defense. To serve as a barrier on growing organs, cuticles must remain intact but at the same time must accommodate ongoing growth. Minimizing cuticle failure has s...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/erx265

    authors: Khanal BP,Knoche M

    更新日期:2017-11-09 00:00:00

  • Two key polymorphisms in a newly discovered allele of the Vitis vinifera TPS24 gene are responsible for the production of the rotundone precursor α-guaiene.

    abstract::Rotundone was initially identified as a grape-derived compound responsible for the peppery aroma of Shiraz wine varieties. It has subsequently been found in black and white pepper and several other spices. Because of its potent aroma, the molecular basis for rotundone formation is of particular relevance to grape and ...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erv491

    authors: Drew DP,Andersen TB,Sweetman C,Møller BL,Ford C,Simonsen HT

    更新日期:2016-02-01 00:00:00

  • Heat stress increases the use of cytosolic pyruvate for isoprene biosynthesis.

    abstract::The increasing occurrence of heatwaves has intensified temperature stress on terrestrial vegetation. Here, we investigate how two contrasting isoprene-emitting tropical species, Ficus benjamina and Pachira aquatica, cope with heat stress and assess the role of internal plant carbon sources for isoprene biosynthesis in...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erz353

    authors: Yáñez-Serrano AM,Mahlau L,Fasbender L,Byron J,Williams J,Kreuzwieser J,Werner C

    更新日期:2019-10-24 00:00:00

  • Foxtail mosaic virus-induced flowering assays in monocot crops.

    abstract::Virus-induced flowering (VIF) exploits RNA or DNA viruses to express flowering time genes to induce flowering in plants. Such plant virus-based tools have recently attracted widespread attention for their fundamental and applied uses in flowering physiology and in accelerating breeding in dicotyledonous crops and wood...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eraa080

    authors: Yuan C,Li H,Qin C,Zhang X,Chen Q,Zhang P,Xu X,He M,Zhang X,Tör M,Xue D,Wang H,Jackson S,He Y,Liu Y,Shi N,Hong Y

    更新日期:2020-05-30 00:00:00

  • Effects of photo and thermo cycles on flowering time in barley: a genetical phenomics approach.

    abstract::The effects of synchronous photo (16 h daylength) and thermo (2 degrees C daily fluctuation) cycles on flowering time were compared with constant light and temperature treatments using two barley mapping populations derived from the facultative cultivar 'Dicktoo'. The 'Dicktoo'x'Morex' (spring) population (DM) segrega...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ern131

    authors: Karsai I,Szucs P,Koszegi B,Hayes PM,Casas A,Bedo Z,Veisz O

    更新日期:2008-01-01 00:00:00

  • Direct in vivo evidence of immense stem water exploitation in irrigated date palms.

    abstract::During the summer, evaporative demand at midday often exceeds the transport capacity of most desert plants. However, date palms maintain their ecological dominance with sustained and uniquely high rates of transpiration. This high rate of flow cannot be attributed to soil water supply alone. In order to quantify intra...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eru421

    authors: Sperling O,Shapira O,Schwartz A,Lazarovitch N

    更新日期:2015-01-01 00:00:00

  • Metabolic routes affecting rubber biosynthesis in Hevea brasiliensis latex.

    abstract::The cytosolic mevalonate (MVA) pathway in Hevea brasiliensis latex is the conventionally accepted pathway which provides isopentenyl diphosphate (IPP) for cis-polyisoprene (rubber) biosynthesis. However, the plastidic 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway may be an alternative source of IPP since its more ...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/err363

    authors: Chow KS,Mat-Isa MN,Bahari A,Ghazali AK,Alias H,Mohd-Zainuddin Z,Hoh CC,Wan KL

    更新日期:2012-03-01 00:00:00

  • Soybean cultivars 'Williams 82' and 'Maple Arrow' produce both urea and ammonia during ureide degradation.

    abstract::The ability of two soybean (Glycine max L. [Merrill]) cultivars, 'Williams 82' and 'Maple Arrow', which were reported to use different ureide degradation pathways, to degrade the ureides allantoin and allantoate was investigated. Protein fractions and total leaf homogenates from the fourth trifoliate leaves of both cu...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erh100

    authors: Todd CD,Polacco JC

    更新日期:2004-04-01 00:00:00

  • Low copy number gene transfer and stable expression in a commercial wheat cultivar via particle bombardment.

    abstract::Two groups of linear gene constructs (gus and bar, and 1Ax1 and bar) lacking vector backbone sequences were independently transferred into the elite wheat (Triticum aestivum L.) variety EM12, and genetically stable transgenic plants with low copy number transgene integration were recovered. Co-transformation experimen...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erl145

    authors: Yao Q,Cong L,Chang JL,Li KX,Yang GX,He GY

    更新日期:2006-01-01 00:00:00

  • Diel patterns of leaf and root growth: endogenous rhythmicity or environmental response?

    abstract::Plants are sessile organisms forced to adjust to their surrounding environment. In a single plant the photoautotrophic shoot is exposed to pronounced environmental variations recurring in a day-night 24 h (diel) cycle, whereas the heterotrophic root grows in a temporally less fluctuating environment. The contrasting h...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/err334

    authors: Ruts T,Matsubara S,Wiese-Klinkenberg A,Walter A

    更新日期:2012-05-01 00:00:00

  • Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.

    abstract::Transcription factors of the NAC family are known to be involved in various developmental processes and in response to environmental stresses. Whereas NAC genes have been widely studied in response to abiotic stresses, little is known about their role in response to biotic stresses, especially in crops. Here, the firs...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ert277

    authors: Le Hénanff G,Profizi C,Courteaux B,Rabenoelina F,Gérard C,Clément C,Baillieul F,Cordelier S,Dhondt-Cordelier S

    更新日期:2013-11-01 00:00:00

  • Differential expression of putative floral genes in Pharbitis nil shoot apices cultured on glucose compared with sucrose.

    abstract::If, following an inductive treatment of 2 d of continuous darkness, shoot apices of Pharbitis nil are cultured 1 d later on White's medium supplemented with 2% sucrose, they cannot form carpels, but they can if they are cultured on 2% glucose. It was hypothesized that the differential effect of these sugars was becaus...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erh234

    authors: Parfitt D,Herbert RJ,Rogers HJ,Francis D

    更新日期:2004-10-01 00:00:00

  • Comprehensive QTL mapping survey dissects the complex fruit texture physiology in apple (Malus x domestica Borkh.).

    abstract::Fruit ripening is a complex physiological process in plants whereby cell wall programmed changes occur mainly to promote seed dispersal. Cell wall modification also directly regulates the textural properties, a fundamental aspect of fruit quality. In this study, two full-sib populations of apple, with 'Fuji' as the co...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/err326

    authors: Longhi S,Moretto M,Viola R,Velasco R,Costa F

    更新日期:2012-02-01 00:00:00

  • β-Carboxysome bioinformatics: identification and evolution of new bacterial microcompartment protein gene classes and core locus constraints.

    abstract::Carboxysomes are bacterial microcompartments (BMCs) that enhance CO2 fixation in all cyanobacteria. Structurally, carboxysome shell proteins are classified according to the type of oligomer formed: hexameric (BMC-H), trimeric (BMC-T) and pentameric (BMC-P) proteins. To understand the forces driving the evolution of th...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erx115

    authors: Sommer M,Cai F,Melnicki M,Kerfeld CA

    更新日期:2017-06-01 00:00:00

  • Progress and challenges of engineering a biophysical CO2-concentrating mechanism into higher plants.

    abstract::Growth and productivity in important crop plants is limited by the inefficiencies of the C3 photosynthetic pathway. Introducing CO2-concentrating mechanisms (CCMs) into C3 plants could overcome these limitations and lead to increased yields. Many unicellular microautotrophs, such as cyanobacteria and green algae, poss...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/erx133

    authors: Rae BD,Long BM,Förster B,Nguyen ND,Velanis CN,Atkinson N,Hee WY,Mukherjee B,Price GD,McCormick AJ

    更新日期:2017-06-01 00:00:00

  • Ureide degradation pathways in intact soybean leaves.

    abstract::Ureides dramatically accumulate in shoots of N(2)-fixing soybean (Glycine max L. Merr.) under water deficit and this accumulation is higher in cultivars that have N(2) fixation that is sensitive to water deficit. One possible explanation is that ureide accumulation is associated with a feedback inhibition of nitrogena...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:

    authors: Vadez V,Sinclair TR

    更新日期:2000-08-01 00:00:00

  • Characterization of ion channel modulator effects on ABA- and malate-induced stomatal movements: strong regulation by kinase and phosphatase inhibitors, and relative insensitivity to mastoparans.

    abstract::In the present study abscisic acid-induced stomatal closing, and malate effects on stomatal apertures were analysed in the presence of guard cell ion channel regulators. A recent study has suggested that abscisic acid (ABA) activation of protein kinases and/or inhibition of protein phosphatases may be central to activ...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/48.Special_Issue.539

    authors: Esser JE,Liao YJ,Schroeder JI

    更新日期:1997-03-01 00:00:00

  • Transcriptome profiling of cytokinin and auxin regulation in tomato root.

    abstract::Tomato is a model and economically important crop plant with little information available about gene expression in roots. Currently, there have only been a few studies that examine hormonal responses in tomato roots and none at a genome-wide level. This study examined the transcriptome atlas of tomato root regions (ro...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ers365

    authors: Gupta S,Shi X,Lindquist IE,Devitt N,Mudge J,Rashotte AM

    更新日期:2013-01-01 00:00:00

  • Multifaceted roles of nitric oxide in tomato fruit ripening: NO-induced metabolic rewiring and consequences for fruit quality traits.

    abstract::Nitric oxide (NO) has been increasingly implicated as part of the ripening regulatory networks in fleshy fruits. However, very little is known about the simultaneous action of NO on the intertwined web of regulatory events and metabolic reactions behind the ripening-related changes in fruit color, taste, aroma and nut...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/eraa526

    authors: Zuccarelli R,Rodríguez-Ruiz M,Lopes-Oliveira PJ,Pascoal GB,Andrade SCS,Furlan CM,Purgatto E,Palma JM,Corpas FJ,Rossi M,Freschi L

    更新日期:2020-11-09 00:00:00

  • Root architecture simulation improves the inference from seedling root phenotyping towards mature root systems.

    abstract::Root phenotyping provides trait information for plant breeding. A shortcoming of high-throughput root phenotyping is the limitation to seedling plants and failure to make inferences on mature root systems. We suggest root system architecture (RSA) models to predict mature root traits and overcome the inference problem...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erw494

    authors: Zhao J,Bodner G,Rewald B,Leitner D,Nagel KA,Nakhforoosh A

    更新日期:2017-02-01 00:00:00

  • Sulfate transport systems in plants: functional diversity and molecular mechanisms underlying regulatory coordination.

    abstract::Sulfate transporters are integral membrane proteins controlling the flux of sulfate (SO42-) entering the cells and subcellular compartments across the membrane lipid bilayers. Sulfate uptake is a dynamic biological process that occurs in multiple cell layers and organs in plants. In vascular plants, sulfate ions are t...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章,评审

    doi:10.1093/jxb/erz132

    authors: Takahashi H

    更新日期:2019-08-19 00:00:00

  • Comparative transcriptome analysis in Arabidopsis ein2/ore3 and ahk3/ore12 mutants during dark-induced leaf senescence.

    abstract::Leaf senescence involves degenerative but active biological processes that require balanced regulation of pro- and anti-senescing activities. Ethylene and cytokinin are major antagonistic regulatory hormones that control the timing and progression rate of leaf senescence. To identify the roles of these hormones in the...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/ery137

    authors: Kim J,Park SJ,Lee IH,Chu H,Penfold CA,Kim JH,Buchanan-Wollaston V,Nam HG,Woo HR,Lim PO

    更新日期:2018-05-25 00:00:00

  • Characterization of expression, and cloning, of beta-D-xylosidase and alpha-L-arabinofuranosidase in developing and ripening tomato (Lycopersicon esculentum Mill.) fruit.

    abstract::Modifications to the cell wall of developing and ripening tomato fruit are mediated by cell wall-degrading enzymes, including a beta-d-xylosidase or alpha-l-arabinofuranosidase, which participate in the breakdown of xylans and/or arabinoxylans. The activity of both enzymes was highest during early fruit growth, before...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erg291

    authors: Itai A,Ishihara K,Bewley JD

    更新日期:2003-12-01 00:00:00

  • A transcriptomic study of grapevine (Vitis vinifera cv. Cabernet-Sauvignon) interaction with the vascular ascomycete fungus Eutypa lata.

    abstract::Eutypa dieback is a vascular disease that may severely affect vineyards throughout the world. In the present work, microarrays were made in order (i) to improve our knowledge of grapevine (Vitis vinifera cv. Cabernet-Sauvignon) responses to Eutypa lata, the causal agent of Eutypa dieback; and (ii) to identify genes th...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erq040

    authors: Camps C,Kappel C,Lecomte P,Léon C,Gomès E,Coutos-Thévenot P,Delrot S

    更新日期:2010-06-01 00:00:00

  • Evolving gene banks: improving diverse populations of crop and exotic germplasm with optimal contribution selection.

    abstract::We simulated pre-breeding in evolving gene banks - populations of exotic and crop types undergoing optimal contribution selection for long-term genetic gain and management of population genetic diversity. The founder population was based on crosses between elite crop varieties and exotic lines of field pea (Pisum sati...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erw406

    authors: Cowling WA,Li L,Siddique KHM,Henryon M,Berg P,Banks RG,Kinghorn BP

    更新日期:2017-04-01 00:00:00

  • Sub-zero cold tolerance of Spartina pectinata (prairie cordgrass) and Miscanthus × giganteus: candidate bioenergy crops for cool temperate climates.

    abstract::Miscanthus × giganteus grown in cool temperate regions of North America and Europe can exhibit severe mortality in the year after planting, and poor frost tolerance of leaves. Spartina pectinata (prairie cordgrass), a productive C4 perennial grass native to North America, has been suggested as an alternative biofuel f...

    journal_title:Journal of experimental botany

    pub_type: 杂志文章

    doi:10.1093/jxb/erv085

    authors: Friesen PC,Peixoto Mde M,Lee DK,Sage RF

    更新日期:2015-07-01 00:00:00