Continuing Impacts of Selective Inhibition on Bacterial and Fungal Communities in an Agricultural Soil.

abstract：:Although phototrophic microbial communities are important components of soils in arid and semi-arid ecosystems around the world, the knowledge of their taxonomic composition and dependency on soil chemistry and vegetation is still fragmentary. We studied the abundance and the diversity of cyanobacteria and eukaryotic ...

journal_title：Microbial ecology

authors： Reháková K,Chlumská Z,Doležal J

更新日期：2011-08-01 00:00:00

abstract：:Rice sheath rot has been mainly associated with the bacterial pathogen Pseudomonas fuscovaginae and in some cases to the fungal pathogen Sarocladium oryzae; it is yet unclear if they are part of a complex disease. The bacterial and fungal community associated with rice sheath rot symptomatic and asymptomatic rice plan...

journal_title：Microbial ecology

authors： Musonerimana S,Bez C,Licastro D,Habarugira G,Bigirimana J,Venturi V

更新日期：2020-10-01 00:00:00

abstract：:The marine, free-living Stilbonematinae (Nematoda: Desmodorida) inhabit the oxygen sulfide chemocline in marine sands. They are characterized by an association with ectosymbiotic bacteria. According to their ultrastructure the bacteria are Gram-negative and form morphologically uniform coats that cover the entire body...

journal_title：Microbial ecology

authors： Polz MF,Felbeck H,Novak R,Nebelsick M,Ott JA

更新日期：1992-11-01 00:00:00

abstract：:Staphylococcus aureus, an opportunistic pathogen member of the nasal and skin microbiota, can also be found in human oral samples and has been linked to infectious diseases of the oral cavity. As the nasal and oral cavities are anatomically connected, it is currently unclear whether S. aureus can colonize the oral cav...

journal_title：Microbial ecology

authors： Lima BP,Hu LI,Vreeman GW,Weibel DB,Lux R

更新日期：2019-08-01 00:00:00

abstract：:The symbiotic microbes that grow in and on many organisms can play important roles in protecting their hosts from pathogen infection. While species diversity has been shown to influence community function in many other natural systems, the question of how species diversity of host-associated symbiotic microbes contrib...

journal_title：Microbial ecology

authors： Piovia-Scott J,Rejmanek D,Woodhams DC,Worth SJ,Kenny H,McKenzie V,Lawler SP,Foley JE

更新日期：2017-07-01 00:00:00

abstract：:Propionate is one of the major intermediates in anaerobic digestion of organic waste to CO2 and CH4. In methanogenic environments, propionate is degraded through a mutualistic interaction between symbiotic propionate oxidizers and methanogens. Although temperature heavily influences the microbial ecology and performan...

journal_title：Microbial ecology

authors： Chen YT,Zeng Y,Wang HZ,Zheng D,Kamagata Y,Narihiro T,Nobu MK,Tang YQ

更新日期：2020-07-01 00:00:00

abstract：:One of the major challenges in microbial ecology for the future is to establish links between structural and functional biodiversity. This is particularly difficult when one is interested in a phylogenetically diversified function such as denitrification. The data banks are very rich in functional gene sequences (nirS...

journal_title：Microbial ecology

authors： Goregues CM,Michotey VD,Bonin PC

更新日期：2005-02-01 00:00:00

abstract：:Scleractinian corals form the framework of coral reefs and host abundant and diverse microbial communities that are fundamental to their success. A very limited number of studies have examined the co-occurrence of multiple partners within the coral 'holobiont' and their pattern of specificity over different geographic...

journal_title：Microbial ecology

authors： Bernasconi R,Stat M,Koenders A,Huggett MJ

更新日期：2019-04-01 00:00:00

abstract：:Viable bacteria were found in permafrost core samples from the Kolyma-Indigirka lowland of northeast Siberia. The samples were obtained at different depths; the deepest was about 3 million years old. The average temperature of the permafrost is -10 degrees C. Twenty-nine bacterial isolates were characterized by 16S rD...

journal_title：Microbial ecology

authors： Shi T,Reeves RH,Gilichinsky DA,Friedmann EI

更新日期：1997-05-01 00:00:00

abstract：:We investigated the impact of fish farm biodeposition on benthic bacteria, thraustochytrid protists, and heterotrophic protozoa (nanoflagellates and ciliates) in an oligotrophic area of the Mediterranean Sea. The fish farm impact was investigated both on a seagrass (Posidonia oceanica) bed and on soft bottom sediments...

journal_title：Microbial ecology

authors： Bongiorni L,Mirto S,Pusceddu A,Danovaro R

更新日期：2005-08-01 00:00:00

abstract：:Bacterial symbionts are increasingly recognised as mediators of ecologically important traits of their animal hosts, with acquisition of new traits possible by uptake of novel symbionts. The entomopathogenic nematode Heterorhabditis downesi associates with two bacterial symbionts, Photorhabdus temperata subsp. tempera...

journal_title：Microbial ecology

authors： Maher AMD,Asaiyah MAM,Brophy C,Griffin CT

更新日期：2017-01-01 00:00:00

abstract：:Assimilatory nitrate reductase gene fragments were isolated from epiphytes and plankton associated with seagrass blades collected from Tampa Bay, Florida, USA. Nitrate reductase genes from diatoms (NR) and heterotrophic bacteria (nasA) were amplified by polymerase chain reaction (PCR) using two sets of degenerate prim...

journal_title：Microbial ecology

authors： Adhitya A,Thomas FI,Ward BB

更新日期：2007-11-01 00:00:00

abstract：:In recent years, several episodes of mass mortality of sessile epibenthic invertebrates, including sponges, have been recorded worldwide. In the present study, we report a disease event on Ircinia variabilis recorded in September 2009 along the southern Adriatic and Ionian seas (Apulian coast), with the aim to quantif...

journal_title：Microbial ecology

authors： Stabili L,Cardone F,Alifano P,Tredici SM,Piraino S,Corriero G,Gaino E

更新日期：2012-10-01 00:00:00

abstract：:To elucidate the degree of microdiversity within the genus Prochlorococcus, novel Prochlorococcus-specific polymerase chain reaction (PCR) primers were developed for the rpoC1 gene, which encodes the ribonucleic acid (RNA) polymerase core subunit. The size of the PCR fragment (925 bp) coupled with high sequence variat...

journal_title：Microbial ecology

authors： Jameson E,Joint I,Mann NH,Mühling M

更新日期：2008-01-01 00:00:00

abstract：:The main current methods for controlling American Foulbrood (AFB) in honeybees, caused by the bacterial pathogen Paenibacillus larvae, are enforced incineration or prophylactic antibiotic treatment, neither of which is fully satisfactory. This has led to an increased interest in the natural relationships between the p...

journal_title：Microbial ecology

authors： Lamei S,Stephan JG,Nilson B,Sieuwerts S,Riesbeck K,de Miranda JR,Forsgren E

更新日期：2020-04-01 00:00:00

abstract：:Aeromonas species were recovered from over 27% of 183 chlorinated drinking water samples collected during an 18-month period. Sixteen of 20 isolates tested elicited a cytotoxic response by Y-1 mouse adrenal cells. None of the strains was either enterotoxigenic by the rabbit ligated ileal loop assay, exhibited piliatio...

journal_title：Microbial ecology

authors： Lechevallier MW,Evans TM,Seidler RJ,Daily OP,Merrell BR,Rollins DM,Joseph SW

更新日期：1982-12-01 00:00:00

abstract：:Selective isolation, molecular identification and AFLP were used to investigate the distribution of the various species of endophytic and epiphytic Trichoderma associated with banana roots and to compare and contrast their genetic structure. Three specific groups of Trichoderma were observed in the roots of banana. Gr...

journal_title：Microbial ecology

authors： Xia X,Lie TK,Qian X,Zheng Z,Huang Y,Shen Y

更新日期：2011-04-01 00:00:00

abstract：:Lichens host highly diverse microbial communities, with bacteria being one of the most explored groups in terms of their diversity and functioning. These bacteria could partly originate from symbiotic propagules developed by many lichens and, perhaps more commonly and depending on environmental conditions, from differ...

journal_title：Microbial ecology

authors： Leiva D,Fernández-Mendoza F,Acevedo J,Carú M,Grube M,Orlando J

更新日期：2021-01-06 00:00:00

abstract：:Rice root-associated microbial community play an important role in plant nutrient acquisition, biomass production, and stress tolerance. Herein, root-associated community assembly was investigated under different phosphate input levels in phosphorus (P)-deficient paddy soil. Rice was grown in a long-term P-depleted pa...

journal_title：Microbial ecology

authors： Long XE,Yao H

更新日期：2020-02-01 00:00:00

abstract：:Interactions between bacteria and protozoa in soil were studied over 2-week periods in the field and in a pot experiment. Under natural conditions the total biological activity was temporarily synchronized by a large rainfall, and in the laboratory by the addition of water to dried-out soil, with or without plants. In...

journal_title：Microbial ecology

authors： Clarholm M

更新日期：1981-12-01 00:00:00

abstract：:Saltmarshes are typically dominated by perennial grasses with large underground rhizome systems that can change local sediment conditions and be important in shaping the sediment microbial community. Factors such as salinity that control plant zonation in saltmarshes are also likely to influence the microbial communit...

journal_title：Microbial ecology

authors： Rietl AJ,Overlander ME,Nyman AJ,Jackson CR

更新日期：2016-02-01 00:00:00

abstract：:Foliar chemistry influences leaf decomposition, but little is known about how litter chemistry affects the assemblage of bacterial communities during decomposition. Here we examined relationships between initial litter chemistry and the composition of the bacterial community in a stream ecosystem. We incubated replica...

journal_title：Microbial ecology

authors： Wymore AS,Liu CM,Hungate BA,Schwartz E,Price LB,Whitham TG,Marks JC

更新日期：2016-05-01 00:00:00

abstract：:Two annual Baltic Sea phytoplankton blooms occur in spring and summer. The bloom intensity is determined by nutrient concentrations in the water, while the period depends on weather conditions. During the course of the bloom, dead cells sink to the sediment where their degradation consumes oxygen to create hypoxic zon...

journal_title：Microbial ecology

authors： Broman E,Li L,Fridlund J,Svensson F,Legrand C,Dopson M

更新日期：2019-02-01 00:00:00

abstract：:Animal manure from modern animal agriculture constitutes the single largest source of antibiotic resistance (AR) owing to the use of large quantities of antibiotics. After animal manure enters the environment, the AR disseminates into the environment and can pose a potentially serious threat to the health and well-bei...

journal_title：Microbial ecology

authors： Chen J,Michel FC Jr,Sreevatsan S,Morrison M,Yu Z

更新日期：2010-10-01 00:00:00

abstract：:Large areas of rainforest in Asia have been converted to plantations, with uncertain effects on soil biodiversity. Using standard metagenetic methods, we compared the soil biota of bacteria, fungi, and nematodes at three rainforest sites in Malaysia with two rubber plantation sites with similar soils and geology. We p...

journal_title：Microbial ecology

authors： Kerfahi D,Tripathi BM,Dong K,Go R,Adams JM

更新日期：2016-08-01 00:00:00

abstract：:Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous pollutants of the environment. But is their microbial degradation equally wide in distribution? We estimated the PAH degradation capacity of 13 soils ranging from pristine locations (total PAHs approximately 0.1 mg kg(-1)) to heavily polluted industrial sites (tot...

journal_title：Microbial ecology

authors： Johnsen AR,Karlson U

更新日期：2005-11-01 00:00:00

abstract：:Conjugal transfer of a derivative of the RP4 plasmid between Pseudomonas fluorescens AS12 and Serratia plymuthica RF7 was compared in the rhizosphere of pea, wheat, and barley and related to the metabolic activity of the bacteria. To obtain a reliable measure of transfer, which allowed comparison of results between ex...

journal_title：Microbial ecology

authors： Schwaner NE,Kroer N

更新日期：2001-10-01 00:00:00

abstract：:A growing body of evidence now supports the isolation of microorganisms from ancient materials. However, questions about the stringency of extraction methods and the genetic relatedness of isolated organisms to their closest living relatives continue to challenge the authenticity of these ancient life forms. Previous ...

journal_title：Microbial ecology

authors： Greenblatt CL,Baum J,Klein BY,Nachshon S,Koltunov V,Cano RJ

更新日期：2004-07-01 00:00:00

abstract：:Bacterioplankton community composition was studied in 12 lakes in three different geographic regions in Scandinavia using denaturing gradient gel electrophoresis (DGGE) and sequencing of 16S rDNA. Area-specific abundant taxa were found in the lakes in two of the regions. In the region of Uppland the lakes had an alpha...

journal_title：Microbial ecology

authors： Lindström ES,Leskinen E

更新日期：2002-07-01 00:00:00

abstract：:The genus Prochlorococcus is globally abundant and dominates the total phytoplankton biomass and production in the oligotrophic ocean. The single species, Prochlorococcus marinus, comprises six named ecotypes. Our aim was to analyze the taxonomic structure of the genus Prochlorococcus. We analyzed the complete genomes...

journal_title：Microbial ecology

authors： Thompson CC,Silva GG,Vieira NM,Edwards R,Vicente AC,Thompson FL

更新日期：2013-11-01 00:00:00