DNA modification of a maize transposable element correlates with loss of activity.

Abstract:

:An unstable allele of the bronze 2 (bz2) locus was isolated from a Robertson's Mutator Zea mays line containing a family of active transposable Mu elements. This mutation is somatically unstable, resulting in numerous revertant purple sectors on a bronze kernel. By following the variegated kernel phenotype through two generations, several lineages have been identified that have a distorted transmission of the mutant phenotype (fewer variegated kernels are produced than expected). Southern blot analysis of Mu elements in these plants demonstrates a correlation between an inhibition of digestion of Mu elements by certain restriction enzymes and the loss of somatic reversion at the mutant allele. The DNA modification can occur in all the Mu elements in a plant within one generation; however, plants have been identified that contain both modified and unmodified elements, suggesting that the modification can occur in a progressive manner. We hypothesize that the DNA modification results in nonfunctional elements.

authors

Chandler VL,Walbot V

doi

10.1073/pnas.83.6.1767

subject

Has Abstract

pub_date

1986-03-01 00:00:00

pages

1767-71

issue

6

eissn

0027-8424

issn

1091-6490

journal_volume

83

pub_type

杂志文章
  • Gas-phase water-mediated equilibrium between methylglyoxal and its geminal diol.

    abstract::In aqueous solution, aldehydes, and to a lesser extent ketones, hydrate to form geminal diols. We investigate the hydration of methylglyoxal (MG) in the gas phase, a process not previously considered to occur in water-restricted environments. In this study, we spectroscopically identified methylglyoxal diol (MGD) and ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0912121107

    authors: Axson JL,Takahashi K,De Haan DO,Vaida V

    更新日期:2010-04-13 00:00:00

  • Wnt5a inhibits canonical Wnt signaling in hematopoietic stem cells and enhances repopulation.

    abstract::The mechanisms that regulate hematopoietic stem cell (HSC) fate decisions between proliferation and multilineage differentiation are unclear. Members of the Wnt family of ligands that activate the canonical Wnt signaling pathway, which utilizes beta-catenin to relay the signal, have been demonstrated to regulate HSC f...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0704747104

    authors: Nemeth MJ,Topol L,Anderson SM,Yang Y,Bodine DM

    更新日期:2007-09-25 00:00:00

  • Isolation and characterization of a T-lymphocyte somatic mutant with altered signal transduction by the antigen receptor.

    abstract::We have developed an approach for deriving and characterizing antigen-receptor (CD3/Ti) signal-transduction mutants. This strategy combines receptor-mediated growth inhibition and fluorescence-activated cell sorting with the Ca2+-indicator indo-1. Despite the expression of structurally normal CD3/Ti complexes, one suc...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.19.6879

    authors: Goldsmith MA,Weiss A

    更新日期:1987-10-01 00:00:00

  • A long noncoding RNA, LncMyoD, modulates chromatin accessibility to regulate muscle stem cell myogenic lineage progression.

    abstract::Epigenetics regulation plays a critical role in determining cell identity by controlling the accessibility of lineage-specific regulatory regions. In muscle stem cells, epigenetic mechanisms of how chromatin accessibility is modulated during cell fate determination are not fully understood. Here, we identified a long ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2005868117

    authors: Dong A,Preusch CB,So WK,Lin K,Luan S,Yi R,Wong JW,Wu Z,Cheung TH

    更新日期:2020-12-22 00:00:00

  • The role of industry-specific, occupation-specific, and location-specific knowledge in the growth and survival of new firms.

    abstract::How do regions acquire the knowledge they need to diversify their economic activities? How does the migration of workers among firms and industries contribute to the diffusion of that knowledge? Here we measure the industry-, occupation-, and location-specific knowledge carried by workers from one establishment to the...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1800475115

    authors: Jara-Figueroa C,Jun B,Glaeser EL,Hidalgo CA

    更新日期:2018-12-11 00:00:00

  • The Great Recession, genetic sensitivity, and maternal harsh parenting.

    abstract::Using data from the Fragile Families and Child Wellbeing Study, this study examined the effects of the Great Recession on maternal harsh parenting. We found that changes in macroeconomic conditions, rather than current conditions, affected harsh parenting, that declines in macroeconomic conditions had a stronger impac...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 历史文章,杂志文章

    doi:10.1073/pnas.1312398110

    authors: Lee D,Brooks-Gunn J,McLanahan SS,Notterman D,Garfinkel I

    更新日期:2013-08-20 00:00:00

  • Exploiting the synthetic lethality between terminal respiratory oxidases to kill Mycobacterium tuberculosis and clear host infection.

    abstract::The recent discovery of small molecules targeting the cytochrome bc 1 :aa 3 in Mycobacterium tuberculosis triggered interest in the terminal respiratory oxidases for antituberculosis drug development. The mycobacterial cytochrome...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1706139114

    authors: Kalia NP,Hasenoehrl EJ,Ab Rahman NB,Koh VH,Ang MLT,Sajorda DR,Hards K,Grüber G,Alonso S,Cook GM,Berney M,Pethe K

    更新日期:2017-07-11 00:00:00

  • A link between the assembly of flagella and lipooligosaccharide of the Gram-negative bacterium Campylobacter jejuni.

    abstract::Campylobacter jejuni is the leading cause of acute bacterial diarrhea worldwide and is implicated in development of Guillain-Barré syndrome. Two major surface features, the outer membrane lipooligosaccharide and flagella, are highly variable and are often targets for modification. Presumably, these modifications provi...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0913451107

    authors: Cullen TW,Trent MS

    更新日期:2010-03-16 00:00:00

  • Phosphorylation and inactivation of glycogen synthase kinase 3 by protein kinase A.

    abstract::Glycogen synthase kinase 3 (GSK-3) is implicated in multiple biological processes including metabolism, gene expression, cell fate determination, proliferation, and survival. GSK-3 activity is inhibited through phosphorylation of serine 21 in GSK-3 alpha and serine 9 in GSK-3 beta. These serine residues of GSK-3 have ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.220413597

    authors: Fang X,Yu SX,Lu Y,Bast RC Jr,Woodgett JR,Mills GB

    更新日期:2000-10-24 00:00:00

  • Extrachromosomal copies of transposon Tc1 in the nematode Caenorhabditis elegans.

    abstract::Extrachromosomal copies of the 1.6-kilobase transposable element Tc1 are present at the level of between 0.1 and 1.0 copy per cell in Caenorhabditis elegans strain Bergerac. Extrachromosomal elements were detected and studied using Southern hybridizations employing a Tc1-specific probe. The amount of extrachromosomal ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.81.13.4018

    authors: Ruan K,Emmons SW

    更新日期:1984-07-01 00:00:00

  • Chiral plasmons without magnetic field.

    abstract::Plasmons, the collective oscillations of interacting electrons, possess emergent properties that dramatically alter the optical response of metals. We predict the existence of a new class of plasmons-chiral Berry plasmons (CBPs)-for a wide range of 2D metallic systems including gapped Dirac materials. As we show, in t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1519086113

    authors: Song JC,Rudner MS

    更新日期:2016-04-26 00:00:00

  • Actin-dependent rapid recruitment of reluctant synaptic vesicles into a fast-releasing vesicle pool.

    abstract::Glutamatergic synaptic terminals harbor reluctant synaptic vesicles (SVs) that contribute little to synchronous release during action potentials but are release competent when stimulated by sucrose or by direct intracellular application of calcium. It has been noted that the proximity of a release-competent SV to the ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1114072109

    authors: Lee JS,Ho WK,Lee SH

    更新日期:2012-03-27 00:00:00

  • Genome complexity reduction for SNP genotyping analysis.

    abstract::Efficient single nucleotide polymorphism (SNP) genotyping methods are necessary to accomplish many current gene discovery goals. A crucial element in large-scale SNP genotyping is the number of individual biochemical reactions that must be performed. An efficient method that can be used to simultaneously amplify a set...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.261710699

    authors: Jordan B,Charest A,Dowd JF,Blumenstiel JP,Yeh Rf RF,Osman A,Housman DE,Landers JE

    更新日期:2002-03-05 00:00:00

  • Climate change and physical disturbance cause similar community shifts in biological soil crusts.

    abstract::Biological soil crusts (biocrusts)—communities of mosses, lichens, cyanobacteria, and heterotrophs living at the soil surface—are fundamental components of drylands worldwide, and destruction of biocrusts dramatically alters biogeochemical processes, hydrology, surface energy balance, and vegetation cover. Although th...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1509150112

    authors: Ferrenberg S,Reed SC,Belnap J

    更新日期:2015-09-29 00:00:00

  • The editing enzyme ADAR1 and the mRNA surveillance protein hUpf1 interact in the cell nucleus.

    abstract::Posttranscriptional regulation is an important step in the regulation of gene expression. In this article, we show an unexpected connection between two proteins that participate in different processes of posttranscriptional regulation that ensures the production of functional mRNA molecules. Specifically, we show that...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0710576105

    authors: Agranat L,Raitskin O,Sperling J,Sperling R

    更新日期:2008-04-01 00:00:00

  • Unsymmetrical and concerted examples of the effect of enzyme--enzyme interactions on steady-state enzyme kinetics.

    abstract::In previous papers of this series, emphasis has been placed on the steady-state phase transition and critical properties of large lattices of interacting, symmetrical, and identical enzyme molecules. The present paper is concerned with a number of examples of enzyme--enzyme interactions that do not belong to the class...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.75.3.1101

    authors: Hill TL

    更新日期:1978-03-01 00:00:00

  • A metabolic network in the evolutionary context: multiscale structure and modularity.

    abstract::The enormous complexity of biological networks has led to the suggestion that networks are built of modules that perform particular functions and are "reused" in evolution in a manner similar to reusable domains in protein structures or modules of electronic circuits. Analysis of known biological networks has revealed...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0510258103

    authors: Spirin V,Gelfand MS,Mironov AA,Mirny LA

    更新日期:2006-06-06 00:00:00

  • A common variant in the 3'UTR of the GRIK4 glutamate receptor gene affects transcript abundance and protects against bipolar disorder.

    abstract::Underactivity of the glutamatergic system is an attractive model for the pathophysiology of several major mental illnesses. We previously described a chromosome abnormality disrupting the kainate class ionotropic glutamate receptor gene, GRIK4/KA1, in an individual with schizophrenia and learning disability (mental re...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0800643105

    authors: Pickard BS,Knight HM,Hamilton RS,Soares DC,Walker R,Boyd JK,Machell J,Maclean A,McGhee KA,Condie A,Porteous DJ,St Clair D,Davis I,Blackwood DH,Muir WJ

    更新日期:2008-09-30 00:00:00

  • Differentiation of 3T3-L2 fibroblasts into adipose cells in bromodeoxyuridine-suppressed cultures.

    abstract::Growth of 3T3-L2 fibroblasts in medium containing 5-bromo-2'-deoxyuridine prevents the spontaneous cytodifferentiation of these cells into adipose cells. Treatment of bromodeoxyuridine-suppressed cultures at confluence with 1-methyl-3-isobutylxanthine, a promoter of the adipose conversion, results in differentiation o...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.76.9.4451

    authors: Russell TR

    更新日期:1979-09-01 00:00:00

  • Transcriptionally repressed genes become aberrantly methylated and distinguish tumors of different lineages in breast cancer.

    abstract::Aberrant promoter hypermethylation is frequently observed in cancer. The potential for this mechanism to contribute to tumor development depends on whether the genes affected are repressed because of their methylation. Many aberrantly methylated genes play important roles in development and are bivalently marked in ES...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1013224108

    authors: Sproul D,Nestor C,Culley J,Dickson JH,Dixon JM,Harrison DJ,Meehan RR,Sims AH,Ramsahoye BH

    更新日期:2011-03-15 00:00:00

  • Cloning of the alpha chain of human platelet glycoprotein Ib: a transmembrane protein with homology to leucine-rich alpha 2-glycoprotein.

    abstract::Glycoprotein Ib is a surface membrane glycoprotein of platelets that functions as a receptor for von Willebrand factor. It is a heterodimer composed of an alpha and a beta chain linked by a disulfide bond(s). A phage lambda gt11 cDNA expression library prepared from mRNA from a human erythroleukemia cell line, HEL, wa...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.16.5615

    authors: Lopez JA,Chung DW,Fujikawa K,Hagen FS,Papayannopoulou T,Roth GJ

    更新日期:1987-08-01 00:00:00

  • Cellular epigenetics: topochronology of progressive "spontaneous" transformation of cells under growth constraint.

    abstract::Early passages of NIH 3T3 cells yield about 10 transformed foci for every 10(5) cells seeded after the cells multiply to confluence in a standardized 2-week assay. The question arose whether more cells would give rise to foci if given more time for their development. This question could not be answered simply by exten...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.91.2.599

    authors: Chow M,Yao A,Rubin H

    更新日期:1994-01-18 00:00:00

  • Visualization of opiate receptor upregulation by light microscopy autoradiography.

    abstract::Light microscopy autoradiography has been used to visualize neuroanatomical patterns of brain opiate receptor upregulation in response to chronic naltrexone administration. Slide-mounted brain sections of frozen rat brain were labeled in vitro with dihydro[3H]morphine, a relatively selective mu opioid ligand. The grea...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.81.12.3893

    authors: Tempel A,Gardner EL,Zukin RS

    更新日期:1984-06-01 00:00:00

  • A unifying framework for the transient parasite dynamics of migratory hosts.

    abstract::Migrations allow animals to track seasonal changes in resources, find mates, and avoid harsh climates, but these regular, long-distance movements also have implications for parasite dynamics and animal health. Migratory animals have been dubbed "superspreaders" of infection, but migration can also reduce parasite burd...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1908777117

    authors: Peacock SJ,Krkošek M,Lewis MA,Molnár PK

    更新日期:2020-05-19 00:00:00

  • Nitrofurans, a group of synthetic antibiotics, with a new mode of action: discrimination of specific messenger RNA classes.

    abstract::Nitrofurans, a class of antibacterial drugs in extensive use, interferes with gene expression in a highly specific manner. While in the low dose range (0.5-25 mug/ml), 5-nitro-2-furfurylidene-1-aminohydantoin has no effect on transcription, it inhibits specifically the expression of one class of genes in translation. ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.73.10.3386

    authors: Herrlich P,Schweiger M

    更新日期:1976-10-01 00:00:00

  • Effects of ethanol on alanine metabolism in perfused mouse liver studied by 13C NMR.

    abstract::Time courses of 13C labeling from alanine and ethanol in perfused mouse livers have been followed by NMR. The enrichment at specific carbons of glucose, glutamate, glutamine, aspartate, acetate, acetoacetate, beta-hydroxybutyrate, and lactate has been measured. The specific labeling of glutamate in the presence of lab...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.76.10.4808

    authors: Cohen SM,Shulman RG,McLaughlin AC

    更新日期:1979-10-01 00:00:00

  • Binding of host-cell factors to DNA sequences in the long terminal repeat of human T-cell leukemia virus type I: implications for viral gene expression.

    abstract::Efficient expression of human T-cell leukemia virus type I (HTLV-I) genes requires both host and viral proteins and is dependent on DNA sequences in the proviral long terminal repeats (LTRs). We have used DNase I-protection assays (footprinting) to construct a map of protein-DNA interactions over a 250-nucleotide regi...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.85.5.1457

    authors: Nyborg JK,Dynan WS,Chen IS,Wachsman W

    更新日期:1988-03-01 00:00:00

  • Sulfated glycosaminoglycans mediate prion-like behavior of p53 aggregates.

    abstract::Sulfated glycosaminoglycans (GAGs) such as heparan sulfate (HS) are heteropolysaccharides implicated in the pathology of protein aggregation diseases including localized and systemic forms of amyloidosis. Among subdomains of sulfated GAGs, highly sulfated domains of HS, called HS S-domains, have been highlighted as be...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2009931117

    authors: Iwahashi N,Ikezaki M,Nishikawa T,Namba N,Ohgita T,Saito H,Ihara Y,Shimanouchi T,Ino K,Uchimura K,Nishitsuji K

    更新日期:2020-12-29 00:00:00

  • Evidence that an amoeba acquired a chloroplast by retaining part of an engulfed eukaryotic alga.

    abstract::Chlorarachniophytes are amoeboid algae with unusual chloroplasts. Instead of the usual two membranes that surround the chloroplasts of plants, green algae, and red algae, the chloroplasts of chlorarachniophytes have four bounding membranes. The extra membranes may reflect an unusual origin of chlorarachniophyte chloro...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.91.9.3690

    authors: McFadden GI,Gilson PR,Hofmann CJ,Adcock GJ,Maier UG

    更新日期:1994-04-26 00:00:00

  • Stress impairs cognitive flexibility in infants.

    abstract::In human adults, learning and memory under acute stress are characterized by an increased use of rigid habitual response strategies at the cost of flexible cognitive strategies. The immediate effects of stress on cognitive functioning early in life are not well understood. Here we show experimentally that acute stress...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 临床试验,杂志文章

    doi:10.1073/pnas.1508345112

    authors: Seehagen S,Schneider S,Rudolph J,Ernst S,Zmyj N

    更新日期:2015-10-13 00:00:00