Phylogenomic analysis of the family Peptostreptococcaceae (Clostridium cluster XI) and proposal for reclassification of Clostridium litorale (Fendrich et al. 1991) and Eubacterium acidaminophilum (Zindel et al. 1989) as Peptoclostridium litorale gen. nov.

abstract：:Two strains of Gram-stain-positive, strictly aerobic, motile, spore-forming, rod-shaped, moderately halotolerant bacteria, designated as HMF5848T and HME7618, were isolated from salt/brine and subjected to a polyphasic taxonomic investigation. Growth of both yellow-coloured strains occurred in the presence of 1-9 % Na...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kang H,Kang J,Cha I,Kim H,Joung Y,Jang TY,Joh K

更新日期：2020-04-01 00:00:00

abstract：:A novel obligately anaerobic, alkalithermophilic, chemo-organotrophic bacterium was isolated from a small and very shallow geothermally heated pool at Pushino (Kamchatka, Far East Russia). The bacterium, designated strain JW/VK-KS5Y(T), was a Gram staining negative, Gram type positive rod. The cells were sometimes bra...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kevbrin V,Boltyanskaya Y,Garnova E,Wiegel J

更新日期：2008-06-01 00:00:00

abstract：:Partial sequences for 16S rDNA were determined for strains of the genus Saccharothrix, including most described species, as well as strains of the described species of the related genera Kutzneria, Actinokineospora and Actinosynnema. These were aligned with published sequences for other species of these genera, as wel...

journal_title：International journal of systematic and evolutionary microbiology

authors： Labeda DP,Kroppenstedt RM

更新日期：2000-01-01 00:00:00

abstract：:A novel bacterial strain, J103T, was isolated from rhizosphere soil of the mangrove plant Kandelia in Mai Po Inner Deep Bay Ramsar Site, Hong Kong. The strain was aerobic, Gram-stain-negative, oval-shaped with folds in the middle, non-motile and non-spore-forming. It grew at temperatures of 20-30 °C (optimum, 25-30 °C...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yin Q,Liang J,Zhang L,Ma K,Hu ZL,Zhang Y,Xu Y

更新日期：2018-10-01 00:00:00

abstract：:A bacterial strain, designated an-8(T), was isolated from a freshwater shrimp culture pond in Taiwan and characterized using a polyphasic taxonomic approach. Cells of strain an-8(T) were Gram-reaction-negative, aerobic, rod-shaped and non-motile, formed yellow-pigmented colonies and grew at 15-30 °C (optimum 25 °C), p...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sheu SY,Chiu TF,Young CC,Arun AB,Chen WM

更新日期：2011-06-01 00:00:00

abstract：:Acinetobacter lactucae and Acinetobacter dijkshoorniae were recently described as novel species, and both were reported to be closely related to Acinetobacter pittii. Because they were reviewed and published almost concurrently, their descriptions did not include a specific comparison between these two novel species. ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dunlap CA,Rooney AP

更新日期：2018-01-01 00:00:00

abstract：:Genome comparisons based on average nucleotide identity (ANI) values of four strains currently classified as Polynucleobacter necessarius subsp. asymbioticus resulted in ANI values of 75.7-78.4 %, suggesting that each of those strains represents a separate species. The species P. necessarius was proposed by Heckmann a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahn MW,Schmidt J,Pitt A,Taipale SJ,Lang E

更新日期：2016-08-01 00:00:00

abstract：:The taxonomic status of four strains from several mineral water sources in Taejon, Korea, was examined. The DNA base compositions of these strains ranged from 62 to 66 mol %. All of the strains contained sphingolipids and ubiquinone 10 as the main respiratory quinone. The cellular fatty acids of these strains included...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee JS,Shin YK,Yoon JH,Takeuchi M,Pyun YR,Park YH

更新日期：2001-07-01 00:00:00

abstract：:An isolate of purple non-sulfur bacteria was obtained from an acidic Sphagnum peat bog and designated strain RS(T). The colour of cell suspensions of this bacterium growing in the light under anaerobic conditions is purplish red. Cells of strain RS(T) are rod-shaped, 0.8-1.0 microm wide and 2.0-6.0 microm long, motile...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kulichevskaya IS,Guzev VS,Gorlenko VM,Liesack W,Dedysh SN

更新日期：2006-06-01 00:00:00

abstract：:A novel Gram-stain-negative, translucent-white, aerobic, motile and rod-shaped strain, designated N18T, was isolated from a coastal sediment sample collected in Zhoushan, Zhejiang Province, China. 16S rRNA gene similarity analysis revealed that strain N18T demonstrated highest similarity to the genus Kordiimonas(95.3-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ju Z,Zhang R,Hou XJ,Han SB,Li Y,Sun C,Wu M,Xu L

更新日期：2018-05-01 00:00:00

abstract：:Data currently available on members of the genera Haloterrigena and Natrinema suggest that some strains of the species Haloterrigena turkmenica that have been shown by DNA-DNA hybridization to belong to this species show a high degree of 16S rDNA sequence similarity to members of the genus NATRINEMA: However, closer e...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tindall BJ

更新日期：2003-09-01 00:00:00

abstract：:Two Gram-stain-negative, facultative anaerobic, chemoheterotrophic, pink-coloured, rod-shaped and non-motile bacterial strains, PAMC 26568 and PAMC 26569T, were isolated from an Antarctic lichen. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strains PAMC 26568 and PAMC 26569T belong to the famil...

journal_title：International journal of systematic and evolutionary microbiology

authors： Noh HJ,Shin SC,Park Y,Choi A,Baek K,Hong SG,Cho YJ,Lee H,Lee YM

更新日期：2020-11-01 00:00:00

abstract：:Thirteen novel, obligately anaerobic, thermoacidophilic bacteria were isolated from deep-sea hydrothermal vent sites. Four of the strains, designated EP5-r(T), KM1, Mar08-272r(T) and Mar08-368r, were selected for metabolic and physiological characterization. With the exception of strain EP5-r(T), all strains were shor...

journal_title：International journal of systematic and evolutionary microbiology

authors： Flores GE,Hunter RC,Liu Y,Mets A,Schouten S,Reysenbach AL

更新日期：2012-06-01 00:00:00

abstract：:Three strains of lactic acid bacteria (LAB) were isolated from the faeces of apparently healthy wild Canada geese (Branta canadensis) in 2010 by cultivating faecal LAB on Rogosa SL agar under aerobic conditions. These three isolates were found to share 99.9 % gene sequence similarity of their 16S rRNA, their 16S-23S i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Volokhov DV,Amselle M,Beck BJ,Popham DL,Whittaker P,Wang H,Kerrigan E,Chizhikov VE

更新日期：2012-09-01 00:00:00

abstract：:Two bacterial strains, Fuji 18-1(T) and Fuji 23-1(T), were isolated from the blood of the small Japanese field mouse (Apodemus argenteus) and the large Japanese field mouse (Apodemus speciosus), respectively, specimens of which were captured in the forest of Mount Fuji, Japan. Phenotypic characterization (growth condi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Inoue K,Kabeya H,Shiratori H,Ueda K,Kosoy MY,Chomel BB,Boulouis HJ,Maruyama S

更新日期：2010-04-01 00:00:00

abstract：:Strain D-14T, a brown-coloured, Gram-stain-negative, non-motile and rod-shaped bacterium, was isolated from oil-contaminated soil. It was able to grow at 20-40 °C, at pH 6.0-10.0 and at 0-1 % (w/v) NaCl concentration. Based on the 16S rRNA gene sequence analysis, strain D-14T belonged to the genus Lysobacter and was c...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chaudhary DK,Lee SD,Kim J

更新日期：2017-11-01 00:00:00

abstract：:Two strains of Gram-negative, aerobic, non-pigmented, non-motile, rod-shaped, methane-oxidizing bacteria were isolated from an acidic forest cambisol near Marburg, Germany, and were designated as strains BL2(T) and A1. These bacteria were morphologically and phenotypically similar to Methylocella palustris K(T). The c...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dunfield PF,Khmelenina VN,Suzina NE,Trotsenko YA,Dedysh SN

更新日期：2003-09-01 00:00:00

abstract：:A novel Gram-stain-negative, aerobic, oxidase-positive, motile, dimorphic rod bacterium, with a polar flagellum or a polar prostheca, designated as strain WD6-1T, was isolated from a sediment sample collected from a marine solar saltern located in Weihai, PR China. Growth of strain WD6-1T was observed at 15-45 °C (opt...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhai TJ,Liu BT,Zhu RQ,Chen GJ,Du ZJ

更新日期：2019-08-01 00:00:00

abstract：:Strains now considered to represent the type strain of Arthrobacter ilicis, described as a pathogen of American holly, are not identical. The designated type strain does not represent this pathogen. However, one of the other strains sourced to the type strain of the pathogen does appear to be authentic, but is not a m...

journal_title：International journal of systematic and evolutionary microbiology

authors： Young JM,Watson DRW,Dye DW

更新日期：2004-01-01 00:00:00

abstract：:A coccal-shaped organism, designated 516(T), was isolated from yan-tsai-shin (fermented broccoli stems), a traditional fermented food in Taiwan. 16S rRNA gene sequencing results showed that strain 516(T) had 98.9 % sequence similarity to that of the type strain Lactococcus garvieae NBRC 100934(T). Comparison of three ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen YS,Otoguro M,Lin YH,Pan SF,Ji SH,Yu CR,Liou MS,Chang YC,Wu HC,Yanagida F

更新日期：2014-01-01 00:00:00

abstract：:Phytoplasmas, the causal agents of numerous plant diseases, are insect-vector-transmitted, cell-wall-less bacteria descended from ancestral low-G+C-content Gram-positive bacteria in the Bacillus-Clostridium group. Despite their monophyletic origin, widely divergent phytoplasma lineages have evolved in adaptation to sp...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhao Y,Wei W,Lee IM,Shao J,Suo X,Davis RE

更新日期：2009-10-01 00:00:00

abstract：:The class Gammaproteobacteria, which forms one of the largest groups within bacteria, is currently distinguished from other bacteria solely on the basis of its branching in phylogenetic trees. No molecular or biochemical characteristic is known that is unique to the class Gammaproteobacteria or its different subgroups...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gao B,Mohan R,Gupta RS

更新日期：2009-02-01 00:00:00

abstract：:Recent examination of the relationships of the dry necrosis-inducing (necrogenic) erwinias using 16S rDNA sequences demonstrated that these bacteria comprise a polyphyletic group and, therefore, have been subdivided into three distinct genera, Erwinia, Brenneria and Pectobacterium, with the classical 'amylovora' group...

journal_title：International journal of systematic and evolutionary microbiology

authors： Brown EW,Davis RM,Gouk C,van der Zwet T

更新日期：2000-11-01 00:00:00

abstract：:Two strains of species of the genus Marmoricola, designated KIS18-7T and JOS5-1T, were isolated from soil samples in Korea. The 16S rRNA gene sequence of strain KIS18-7T showed highest similarities with Marmoricola scoriae Sco-D01T (97.8 %), Marmoricola aequoreus SST-45T (97.6 %) and Marmoricola aurantiacus BC 361T (9...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim SJ,Lim JM,Hamada M,Ahn JH,Weon HY,Suzuki KI,Ahn TY,Kwon SW

更新日期：2015-06-01 00:00:00

abstract：:We performed a comparative genomic analysis to clarify the taxonomic relationship between the two Enterobacter species, Enterobacter tabaci and Enterobacter mori. Whole genome sequences of types strains of the two species became available recently. Average nucleotide identity (ANI) and in silico DNA-DNA hybridization ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wu W,Zong Z

更新日期：2020-02-01 00:00:00

abstract：:The strictly anaerobic gram-negative bacterium strain Fru22T grows at 50 degrees C in media containing up to 75 g NaCl l(-1). Hexoses and pentoses are fermented to equal molar amounts of acetate, propionate and succinate, and no CO2 is formed. An orange-red pigment similar to flexirrubin is produced during stationary ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Denger K,Warthmann R,Ludwig W,Schink B

更新日期：2002-01-01 00:00:00

abstract：:Two Gram-type-positive, non-spore-forming bacteria, strains D16/0/H6T and A22/0/F9_1T, were isolated from Namibian semiarid savannah soils. 16S rRNA gene sequence analysis revealed 96.6 % identity between the two strains and placed them within the order Solirubrobacterales of the class Thermoleophilia. The closest phy...

journal_title：International journal of systematic and evolutionary microbiology

authors： Foesel BU,Geppert A,Rohde M,Overmann J

更新日期：2016-02-01 00:00:00

abstract：:A Gram-negative bacterium, designated P2(T), was isolated from the biofilm developed on the inner surface of an ultrapure cooling water system in a Hungarian power plant and was characterized by a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain P2(T) was affiliated with...

journal_title：International journal of systematic and evolutionary microbiology

authors： Táncsics A,Kéki Z,Márialigeti K,Schumann P,Tóth EM

更新日期：2010-11-01 00:00:00

abstract：:A strain of a novel non-chromogenic mycobacterium was isolated from synovial tissue from a 68-year-old female with bursitis of her right elbow. The slowly growing strain had a unique PCR-restriction enzyme analysis (PRA) profile of the hsp65 gene and 16S rRNA gene sequence in comparison with other mycobacterium specie...

journal_title：International journal of systematic and evolutionary microbiology

authors： Turenne C,Chedore P,Wolfe J,Jamieson F,Broukhanski G,May K,Kabani A

更新日期：2002-11-01 00:00:00

abstract：:A bacterial isolate from the Baltic Sea, BA160(T), was characterized for its physiological and biochemical features, fatty acid profile, G+C content and phylogenetic position based on 16S rRNA gene sequences. The strain was isolated from the surface water of the central Baltic Sea during the decay of a plankton bloom....

journal_title：International journal of systematic and evolutionary microbiology

authors： Brettar I,Christen R,Höfle MG

更新日期：2004-11-01 00:00:00