Construction of an interactive online phytoplasma classification tool, iPhyClassifier, and its application in analysis of the peach X-disease phytoplasma group (16SrIII).

abstract：:A pink-pigmented, non-motile, coccoid bacterial strain, designated G3-6-20(T), was isolated from a soil sample collected in the Grove Mountains, East Antarctica. This strain was resistant to UV irradiation (810 J m(-2)) and slightly more sensitive to desiccation as compared with Deinococcus radiodurans. Phylogenetic a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dong N,Li HR,Yuan M,Zhang XH,Yu Y

更新日期：2015-02-01 00:00:00

abstract：:A novel Gram-positive, anaerobic and thermophilic bacterium, strain MET79(T), was isolated from an oil well located in the Gulf of Mexico. Cells were straight rods, motile by a subpolar flagellum. Spores were formed in old cultures. Inner gas vacuoles swelled the cells when exposed to air. The optimum growth condition...

journal_title：International journal of systematic and evolutionary microbiology

authors： Miranda-Tello E,Fardeau ML,Sepúlveda J,Fernández L,Cayol JL,Thomas P,Ollivier B

更新日期：2003-09-01 00:00:00

abstract：:A novel endophytic actinomycete, strain GMKU 931(T), was isolated from the root of a wattle tree, Acacia auriculiformis A. Cunn. ex Benth., collected at Kasetsart University, Bangkok, Thailand. Strain GMKU 931(T) produced short spiral chains of smooth-surfaced spores on the aerial mycelium. Lysine and meso-diaminopime...

journal_title：International journal of systematic and evolutionary microbiology

authors： Thamchaipenet A,Indananda C,Bunyoo C,Duangmal K,Matsumoto A,Takahashi Y

更新日期：2010-03-01 00:00:00

abstract：:The phylogeny of the class Actinobacteria remains controversial, essentially because it is very sensitive to the choice of dataset and phylogenetic methods. We used a test proposed recently, based on complete genome data, which chooses among candidate species phylogenies based on the number of lateral gene transfers (...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sen A,Daubin V,Abrouk D,Gifford I,Berry AM,Normand P

更新日期：2014-11-01 00:00:00

abstract：:The present study was aimed at reducing the time and labour used to perform DNA-DNA hybridizations for classification of bacteria at the species level. A micro-well-format DNA hybridization method was developed and validated. DNA extractions were performed by a small-scale method and DNA was sheared mechanically into ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Christensen H,Angen O,Mutters R,Olsen JE,Bisgaard M

更新日期：2000-05-01 00:00:00

abstract：:A novel actinobacterium, designated strain SST-39T, was isolated from a marine sediment sample collected in Jeju, Republic of Korea. Cells were facultatively anaerobic, Gram-positive, non-endospore-forming, non-motile rods. Colonies were circular, slightly convex, opaque and brilliant yellow. The cell-wall peptidoglyc...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee DW,Lee SD

更新日期：2008-04-01 00:00:00

abstract：:A thermophilic actinomycete, strain LA5(T), was isolated from a hot spring in Yunnan province, People's Republic of China. The isolate grew aerobically at temperatures of 50-75 degrees C. Aerobic mycelia were not observed. Single spores were produced along the substrate hypha. Strain LA5(T) was characterized chemotaxo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang YX,Dong C,Biao S

更新日期：2007-08-01 00:00:00

abstract：:The phytoplasma associated with witches' broom disease of loofah [Luffa aegyptica Mill., syn. Luffa cylindrica (L.) M.J. Roem.] in Taiwan was classified in group 16SrVIII, subgroup A (16SrVIII-A), based on results from actual and in silico RFLP analysis of 16S rRNA gene sequences. Nucleotide sequencing of PCR-amplifie...

journal_title：International journal of systematic and evolutionary microbiology

authors： Davis RE,Zhao Y,Wei W,Dally EL,Lee IM

更新日期：2017-08-01 00:00:00

abstract：:Two Gram-stain-positive, moderately thermophilic, endospore-forming, rod-shaped, motile bacteria designated PDF4T and PDF10, were isolated from Camkoy hot spring in the provinces of Aydın, Turkey and were characterized in order to determine their phylogenetic position. 16S rRNA gene sequence analysis revealed that the...

journal_title：International journal of systematic and evolutionary microbiology

authors： Inan K,Ozer A,Ibrahim Guler H,Osman Belduz A,Canakci S

更新日期：2016-02-01 00:00:00

abstract：:A novel bacterial isolate, designated as strain BM15T, was isolated from the gastrointestinal tract of a blood cockle, Tegillarca granosa, which was collected from the foreshore of Beolgyo-eup, Republic of Korea. Strain BM15T was Gram-stain-negative, non-motile, strictly aerobic and short-rod-shaped. Optimum growth of...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee JY,Hyun DW,Yun JH,Jung MJ,Shin NR,Bae JW

更新日期：2019-09-01 00:00:00

abstract：:A mesophilic, facultatively anaerobic, autotrophic bacterium, designated strain Su4(T), was isolated from marine sediment. The isolate was able to utilize reduced sulfur compounds including thiosulfate, tetrathionate, sulfur and sulfide but not sulfite as the energy source. Growth occurred under aerobic and denitrifyi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park SJ,Pham VH,Jung MY,Kim SJ,Kim JG,Roh DH,Rhee SK

更新日期：2011-09-01 00:00:00

abstract：:A strictly aerobic, halotolerant, Gram-stain-negative, rod-shaped bacterium, designated strain DG1253(T), was isolated from a laboratory culture of the marine dinoflagellate Lingulodinium polyedrum (CCAP 1121/2). The strain was able to degrade two- and three-ring polycyclic aromatic hydrocarbons. It exhibited a narrow...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gutierrez T,Green DH,Whitman WB,Nichols PD,Semple KT,Aitken MD

更新日期：2012-11-01 00:00:00

abstract：:Vibrio viscosus and Vibrio wodanis are recently described species of psychrotropic bacteria that have been found associated with a disease called 'winter ulcer', affecting salmonid fish reared in saline water in Norway, Iceland and recently in Scotland. V. viscosus and V. wodanis strains initially isolated from fish i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Benediktsdóttir E,Verdonck L,Spröer C,Helgason S,Swings J

更新日期：2000-03-01 00:00:00

abstract：:A bacterial strain, designated STM-7T, was isolated from a spring in Taiwan and characterized using a polyphasic taxonomy approach. Cells of strain STM-7T were Gram-staining-negative, aerobic, poly-β-hydroxybutyrate-accumulating, motile by a single polar flagellum, rod-shaped, surrounded by a thick capsule and formed ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sheu SY,Li YS,Young CC,Chen WM

更新日期：2016-10-01 00:00:00

abstract：:A reddish pink-pigmented, Gram-stain-negative, aerobic and methylotrophic bacterial strain, designated strain IER25-16T, was isolated from a laboratory air conditioning system in the Republic of Korea. Cells were motile rods showing catalase- and oxidase-positive reactions. Strain IER25-16T grew at 10-40 °C (optimum, ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee Y,Jeon CO

更新日期：2018-01-01 00:00:00

abstract：:A Gram-positive, motile, moderately halophilic and rod-shaped bacterium, strain AHS-1(T), was isolated from a marine solar saltern in Korea, and its exact taxonomic position was investigated by use of a polyphasic study. Strain AHS-1(T) grew optimally at pH 6.5-7.0 and 37-40 degrees C in the presence of 10-12% (w/v) N...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee SY,Choi WY,Oh TK,Yoon JH

更新日期：2008-01-01 00:00:00

abstract：:A Gram-staining-positive, strictly aerobic, non-spore-forming, rod-shaped bacterial strain, CAU 9163(T), was isolated from marine sediment collected in the Republic of Korea and its taxonomic position was investigated using a polyphasic approach. The novel strain grew optimally at 30 °C and pH 8.0. In phylogenetic ana...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim W,Traiwan J,Park MH,Jung MY,Oh SJ,Yoon JH,Sukhoom A

更新日期：2012-08-01 00:00:00

abstract：:A Gram-stain-positive actinobacterial strain, designated YJ01T, was isolated from a spinach farming field soil at Shinan in Korea. Strain YJ01T was aerobic, non-motile, non-spore-forming cocci with diameters of 1.5-1.9 µm, and was able to grow at 10-37 °C (optimum, 28-30 °C), at pH 4.5-9.0 (optimum, pH 7.0-8.0) and at...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee JC,Whang KS

更新日期：2020-03-01 00:00:00

abstract：:Four strains (km711T, km714, km542 and km524), representing a novel Legionella species, were isolated from aquatic environments in northern PR China. Cells were Gram-stain-negative, rod-shaped, microaerobic, motile and growth depended on l-cysteine. They grew at 25‒42 °C (optimum, 35‒37 °C) and could tolerate up to 1....

journal_title：International journal of systematic and evolutionary microbiology

authors： Li LH,Zhang L,Wu HY,Qu PH,Chen JC,Zhan XY,Zhu QY,Chen C,Hu CH

更新日期：2021-01-01 00:00:00

abstract：:An aerobic, Gram-stain-negative, short rod-shaped, non-motile and non-sporulating bacterium, designed strain 8-1b(T), was isolated from seaweed collected from the intertidal zone of Zhoushan sea area, East China Sea. Strain 8-1b(T) grew at 4-39 °C (optimum, 28-32 °C) and at pH 6.0-9.5 (optimum, 7.0-8.5), and with 0.5-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu JJ,Zhang XQ,Pan J,Sun C,Zhang Y,Li CQ,Zhu XF,Wu M

更新日期：2013-09-01 00:00:00

abstract：:Two red pigment-producing bacterial strains with a metallic green sheen were isolated from a sediment sample of getbol, the Korean tidal flat. Phylogenetic analysis based on 16S rDNA sequences showed that these isolates represent a phyletic lineage within the gamma-Proteobacteria that is distantly related to the genus...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yi H,Chang YH,Oh HW,Bae KS,Chun J

更新日期：2003-07-01 00:00:00

abstract：:Two Gram-stain-negative, oxidase-negative, catalase-positive, aerobic and coccus-shaped bacterial strains, KSY3-6T and JSH6-18, were isolated from soil in South Korea. Strains KSY3-6T and JSH6-18 showed high resistance to gamma-ray and UVC irradiation. The 16S rRNA gene sequences of strains KSY3-6T and JSH6-18 showed ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jeon SH,Kang MS,Joo ES,Kim EB,Lim S,Jeong SW,Jung HY,Srinivasan S,Kim MK

更新日期：2016-12-01 00:00:00

abstract：:'Caulobacter leidyi' DSM 4733(T) has been shown to be affiliated with the family Sphingomonadaceae instead of the Caulobacteraceae, and due to its poor characterization has been omitted from the current edition of Bergey's Manual of Systematic Bacteriology and removed to limbo. We isolated a novel sphingoglycolipid-co...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen H,Jogler M,Rohde M,Klenk HP,Busse HJ,Tindall BJ,Spröer C,Overmann J

更新日期：2012-12-01 00:00:00

abstract：:A Gram-negative, aerobic, rod-shaped, non-motile bacterium, designated strain HQ09T, was isolated from a marine sponge off the coast of Fields Peninsula, West Antarctica. Strain HQ09T grew at 4-35 °C (optimum, 25 °C), pH 5-9 (optimum, pH 7.0), and with 1-10% NaCl (optimum, 2 %). Phylogenetic analysis based on the 16S ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liao L,Su SY,Zhang YJ,Liu H,Zhang XY,Zhang J,Wen J,Chen B,Yu Y

更新日期：2021-01-01 00:00:00

abstract：:A Gram-stain-positive bacterial strain, designated as NR2T, isolated from noni (Morinda citrifolia L.) branch was investigated using a polyphasic taxonomic approach. The cells were small coccoid to ovoid, non-spore-forming and motile. Phylogenetic analysis based on 16S rRNA gene sequences showed that the strain was a ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu Y,Zhai L,Yao S,Cao Y,Cao Y,Zhang X,Su J,Ge Y,Zhao R,Cheng C

更新日期：2015-11-01 00:00:00

abstract：:Analyses of nucleotide sequences from the D1/D2 domains of the large-subunit rDNA and phenotypic characteristics showed that the genera Moniliella and Trichosporonoides are members of a single, monophyletic clade that would be best represented by a single anamorphic genus. On the basis of taxonomic priority, we propos...

journal_title：International journal of systematic and evolutionary microbiology

authors： Rosa CA,Jindamorakot S,Limtong S,Nakase T,Lachance MA,Fidalgo-Jiménez A,Daniel HM,Pagnocca FC,Inácio J,Morais PB

更新日期：2009-02-01 00:00:00

abstract：:Three strains (JA826T, JA912T and JA913), which were yellowish brown colour, rod to oval shaped, Gram-stain-negative, motile, phototrophic bacteria with a vesicular architecture of intracytoplasmic membranes, were isolated from different pond samples. The DNA G+C content of the three strains was between 64.6 and 65.5 ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Suresh G,Sailaja B,Ashif A,Dave BP,Sasikala C,Ramana CV

更新日期：2017-09-01 00:00:00

abstract：:Two strains (S-34T and S-35) of a novel ascomycetous yeast species belonging to the genus Kazachstania were isolated from soil from a mixed deciduous forest in Amphoe Wang Nam Khiao, Nakhon Ratchasima Province, Thailand. The D1/D2 domains of the large-subunit rDNA sequences of the two strains were identical and also i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Limtong S,Yongmanitchai W,Tun MM,Kawasaki H,Seki T

更新日期：2007-02-01 00:00:00

abstract：:A Gram-staining-negative, rod-shaped and non-motile bacterium, designated CL-SS4T, was isolated from crude-oil-contaminated seawater from the west coast of Korea and was investigated by means of a polyphasic taxonomic approach. Strain CL-SS4T grew optimally at 25-30 degrees C, at pH 6.8-7.7 and in the presence of 2-3%...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hwang CY,Kim MH,Bae GD,Zhang GI,Kim YH,Cho BC

更新日期：2009-08-01 00:00:00

abstract：:A Gram-stain-negative, rod-shaped, mesophilic, milky white-pigmented, aerobic, non-spore-forming and non-flagellated bacterium, designated strain X16T, was isolated from urban soil of Zibo, Shandong, China. According to 16S rRNA gene sequence analysis, the isolate showed highest similarities with Paraflavitalea soli 5...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hou X,Liu H,Shang Y,Mao S,Li S,Sang F,Deng H,Wang L,Kong L,Zhang C,Ding Z,Gao Y,Wei S,Chen Z

更新日期：2021-01-01 00:00:00