Sphingomonas aquatilis sp. nov., Sphingomonas koreensis sp. nov., and Sphingomonas taejonensis sp. nov., yellow-pigmented bacteria isolated from natural mineral water.

abstract：:A Gram-stain-negative, rod-shaped (1.2-2.1 μm × 0.8-0.9 μm), flagellated and motile marine bacterium, designated MEBiC05461T, was isolated from a marine sponge inhabiting Micronesia. Strain MEBiC05461T was oxidase-negative and catalase-positive. Growth was observed at 8.0-35.6 °C (optimum 30.0 °C), at pH 5.0-9.0 (opti...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jang H,Yang SH,Seo HS,Lee JH,Kim SJ,Kwon KK

更新日期：2015-06-01 00:00:00

abstract：:Four isolates (FSL S4-120(T), FSL S4-696, FSL S4-710, and FSL S4-965) of Gram-positive, motile, facultatively anaerobic, non-spore-forming bacilli that were phenotypically similar to species of the genus Listeria were isolated from soil, standing water and flowing water samples obtained from the natural environment in...

journal_title：International journal of systematic and evolutionary microbiology

authors： Graves LM,Helsel LO,Steigerwalt AG,Morey RE,Daneshvar MI,Roof SE,Orsi RH,Fortes ED,Milillo SR,den Bakker HC,Wiedmann M,Swaminathan B,Sauders BD

更新日期：2010-06-01 00:00:00

abstract：:Five Mycoplasma strains have been isolated from the oropharynx of southern sea otters (Enhydra lutris nereis) from the Central California Coast, USA. These strains were phenotypically and genetically characterized and compared to other established Mycoplasma species. All five strains hydrolysed arginine but not urea, ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Volokhov DV,Batac F,Gao Y,Miller M,Chizhikov VE

更新日期：2019-02-01 00:00:00

abstract：:A description of an outbreak of necrotizing enterocolitis among neonates, linked to the putative novel species Clostridium neonatale and assignable to the genus Clostridium, was previously reported in brief but that name had never been validly published (Alfa et al. Clin Inf Dis 2002;35:S101-S105). Features of this ta...

journal_title：International journal of systematic and evolutionary microbiology

authors： Bernard K,Burdz T,Wiebe D,Alfa M,Bernier AM

更新日期：2018-08-01 00:00:00

abstract：:A novel, Gram-stain-negative, non-motile and rod-shaped bacterium, designated YH5T, was isolated from the YonghuCo wetland on the Tibetan Plateau. The strain was able to grow optimally with 1 % (w/v) NaCl and tolerated up to 3 % NaCl. Growth occurred at pH 6-9 (optimum pH 7) and 10-37 °C (optimum 30 °C). Vitamins were...

journal_title：International journal of systematic and evolutionary microbiology

authors： Phurbu D,Lu H,Xue X,Tian Y,Pema Y,Ma C,Xing P

更新日期：2019-01-01 00:00:00

abstract：:A novel Gram-positive, moderately halophilic bacterium, designated strain X4B(T), was isolated from soil around the hypersaline lake Aran-Bidgol in Iran and characterized taxonomically using a polyphasic approach. Cells of strain X4B(T) were motile rods and formed ellipsoidal endospores at a terminal or subterminal po...

journal_title：International journal of systematic and evolutionary microbiology

authors： Amoozegar MA,Bagheri M,Didari M,Shahzedeh Fazeli SA,Schumann P,Sánchez-Porro C,Ventosa A

更新日期：2013-01-01 00:00:00

abstract：:An anthracycline-producing actinomycete (strain SF2303) was compared with two other anthracycline producers, Actinomadura carminata IFO 15903T and Nonomuraea roseoviolacea IFO 14098T, using morphological, physiological, chemotaxonomic and molecular-genetic criteria. The morphological and cultural characteristics of th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gyobu Y,Miyadoh S

更新日期：2001-05-01 00:00:00

abstract：:Strain 7SM29T, an aerobic marine gammaproteobacterium isolated from seawater from Castellón, Spain, was characterized by classical phenotyping, chemotaxonomy and 16S rRNA gene sequence analysis. Strain 7SM29T was found to be closely related to strains in the genus Haliea and to Congregibacter litoralis KT71T, with whi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lucena T,Pascual J,Garay E,Arahal DR,Macián MC,Pujalte MJ

更新日期：2010-08-01 00:00:00

abstract：:An analysis of 16S rRNA gene sequences from archived clinical reference specimens has identified two novel Neisseria species. For each species, two strains from independent sources were identified. Amongst species with validly published names, the closest species to the newly identified organisms were Neisseria canis,...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wolfgang WJ,Carpenter AN,Cole JA,Gronow S,Habura A,Jose S,Nazarian EJ,Kohlerschmidt DJ,Limberger R,Schoonmaker-Bopp D,Spröer C,Musser KA

更新日期：2011-01-01 00:00:00

abstract：:A rod-shaped, slightly curved sulfate reducer, designated strain P2(T), was isolated from the sulfate-methane transition zone of a marine sediment. Cells were motile by means of a single polar flagellum. The strain reduced sulfate, thiosulfate and sulfite to sulfide and used propionate, lactate and 1-propanol as elect...

journal_title：International journal of systematic and evolutionary microbiology

authors： Abildgaard L,Ramsing NB,Finster K

更新日期：2004-03-01 00:00:00

abstract：:A novel hyperthermophilic archaeon of strain HS-3T, belonging to the family Sulfolobaceae, was isolated from an acidic terrestrial hot spring in Hakone Ohwaku-dani, Japan. Based on 16S rRNA gene sequence analysis, the closest phylogenetic relatives of strain HS-3T were, first, Sulfolobus solfataricus (96.4 %) and, sec...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sakai HD,Kurosawa N

更新日期：2018-04-01 00:00:00

abstract：:Using sequences from the recA locus, we have produced a phylogeny of 188 Dickeya strains from culture collections and identified species relatedness and subspecies clade structure within the genus. Of the six recognized species, Dickeya paradisiaca, D. chrysanthemi and D. zeae were discriminated with long branch lengt...

journal_title：International journal of systematic and evolutionary microbiology

authors： Parkinson N,Stead D,Bew J,Heeney J,Tsror Lahkim L,Elphinstone J

更新日期：2009-10-01 00:00:00

abstract：:Taxonomic studies were performed on ten hydrogen-oxidizing, facultatively chemolithotrophic bacteria that were isolated from volcanic mudflow deposits derived from the eruption of Mt. Pinatubo in the Philippines in 1991. Phylogenetic analysis based on 16S rRNA gene sequences indicated that these isolates belonged to t...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sato Y,Nishihara H,Yoshida M,Watanabe M,Rondal JD,Concepcion RN,Ohta H

更新日期：2006-05-01 00:00:00

abstract：:The term 'standing in nomenclature' is used in several instances in the International Code of Nomenclature of Prokaryotes, but the term is not defined. An analysis of the way the term has been used in the past and the context in which it is currently used indicates that it may be more appropriate to substitute the ter...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tindall BJ

更新日期：2019-07-01 00:00:00

abstract：:A Gram-negative, rod-shaped, motile and aerobic bacterium, designated strain HJ51(T), was isolated from a seawater sample from the East Sea, near South Korea. The isolate grew slowly at 4 °C, was able to grow at 40 °C, required NaCl and grew optimally at pH 6.5-7.0. The G+C content of the genomic DNA was 41.8 mol%. Th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Oh YS,Park AR,Lee JK,Lim CS,Yoo JS,Roh DH

更新日期：2011-02-01 00:00:00

abstract：:Strain IPT101T, isolated from the soil of a sugar-cane plantation in Brazil, was analysed in a polyphasic taxonomic study. The strain produces polyhydroxyalkanoates from sucrose and other carbon sources. Morphological, physiological and biochemical data as well as 16S rDNA, whole-cell protein and fatty acid analyses i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Brämer CO,Vandamme P,da Silva LF,Gomez JG,Steinbüchel A

更新日期：2001-09-01 00:00:00

abstract：:Nineteen strains of Gram-positive, non-motile, non-spore-forming, catalase-positive, rod-shaped bacteria isolated from pigs were characterized by using biochemical, molecular chemical and molecular genetic methods. Two distinct groups of organisms were discerned, based on their colonial morphology, CAMP (Christie-Atki...

journal_title：International journal of systematic and evolutionary microbiology

authors： Vela AI,Mateos A,Collins MD,Briones V,Hutson RA,Domínguez L,Fernández-Garayzábal JF

更新日期：2003-11-01 00:00:00

abstract：:A Gram-stain-negative, strictly aerobic, non-motile, rod-shaped, manganese-oxidizing bacterial strain, designated DY6-4T, was isolated from the surface sediment of the Pacific Clarion-Clipperton Fracture Zone. Phylogenetic analysis, based on 16S rRNA gene sequences, indicated that strain DY6-4T formed a lineage within...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang L,Liu Y,Shi X,Wang Y,Zheng Y,Dai X,Zhang XH

更新日期：2016-03-01 00:00:00

abstract：:Two gamma- and UV-radiation-resistant, pink-coloured bacterial strains, designated YIM F302T and YIM F235, were isolated from the desert of Yanbu' al Bahr located in west of Saudi Arabia. Taxonomic positions of the two isolates were investigated by polyphasic taxonomic approaches. Cells of the two strains were Gram-st...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hussain F,Khan IU,Habib N,Xian WD,Hozzein WN,Zhang ZD,Zhi XY,Li WJ

更新日期：2016-12-01 00:00:00

abstract：:A chemolithotrophic sulfur-oxidizing bacterium, strain aks1T, was isolated from sediment of a brackish lake in Japan. The cells were curved rod-shaped and Gram-stain-negative. The G+C content of the genomic DNA was 53 mol%. The major components in the cellular fatty acid profile were C16 : 0 and summed feature 3 (C16 ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kojima H,Fukui M

更新日期：2016-09-01 00:00:00

abstract：:The type strain of Nocardia corynebacterioides was the subject of a polyphasic taxonomic study. The 16S rRNA gene sequence was aligned with the sequences of representatives of the genera Corynebacterium, Dietzia, Gordonia, Mycobacterium, Nocardia, Rhodococcus, Skermania, Tsukamurella and Williamsia, and phylogenetic t...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yassin AF,Schaal KP

更新日期：2005-05-01 00:00:00

abstract：:The species Archangium gephyra, Angiococcus disciformis, Cystobacter minus and Cystobacter violaceus are currently classified in three different genera of the order Myxococcales. The 16S rRNA gene sequences of the respective type strains show a similarity higher than 98.4 % and form a tight phylogenetic group. A dendr...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lang E,Schumann P,Tindall BJ,Mohr KI,Spröer C

更新日期：2015-11-01 00:00:00

abstract：:A moderately thermophilic bacterial strain (HT4(T)) isolated from a hot spring sediment was characterized phenotypically and phylogenetically. Cells were Gram-negative, aerobic, non-sporulating, rod-shaped and motile by means of a single polar flagellum. Both oxidase and catalase activities were positive. Heterotrophi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Panday D,Das SK

更新日期：2010-04-01 00:00:00

abstract：:Two bacterial strains isolated from different hospitals in Japan were subjected to a polyphasic analysis. Strains IFM 0803(T) and IFM 10383 were found to have morphological, biochemical, physiological and chemotaxonomic properties consistent with their classification in the genus Nocardia. Strains IFM 0803(T) and IFM ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Iida S,Kageyama A,Yazawa K,Uchiyama N,Toyohara T,Chohnabayashi N,Suzuki SI,Nomura F,Kroppenstedt RM,Mikami Y

更新日期：2006-06-01 00:00:00

abstract：:Strain 7SM30(T)(,) an aerobic marine, Gram-negative, heterotrophic and yellow- to orange-pigmented bacterium isolated from seawater from Castellón, Spain, was characterized using a polyphasic approach. Analysis of the 16S rRNA gene sequence showed that the isolate represented a novel lineage within the family Flavobac...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lucena T,Pascual J,Giordano A,Gambacorta A,Garay E,Arahal DR,Macián MC,Pujalte MJ

更新日期：2010-12-01 00:00:00

abstract：:An anaerobic, thermophilic bacterium, strain SET IS-9(T), was isolated from an Icelandic hot spring. Cells of strain SET IS-9(T) are short, slightly curved, motile rods. The strain grows chemolithotrophically on CO, producing equimolar quantities of H(2) and CO(2). It also grows fermentatively on lactate or pyruvate i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Novikov AA,Sokolova TG,Lebedinsky AV,Kolganova TV,Bonch-Osmolovskaya EA

更新日期：2011-10-01 00:00:00

abstract：:Pediococci are found in foods and on plants and as beer-spoilage agents. The goal of the present study was to use the DNA sequences of the first three variable regions of the 165 rRNA gene, the 16S-23S rRNA internally transcribed spacer region sequence and approximately a third of the 60 kDa heat-shock protein gene to...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dobson CM,Deneer H,Lee S,Hemmingsen S,Glaze S,Ziola B

更新日期：2002-11-01 00:00:00

abstract：:A novel Gram-stain-positive bacterium designated CMU-NKS-70T was isolated from a subterranean termite nest and characterized using a polyphasic approach. The strain exhibited branching, pinkish-cream aerial mycelium and cream-brown substrate mycelium, and formed chains of rod-like spores. The 16S rRNA gene sequence an...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sujarit K,Sujada N,Kudo T,Ohkuma M,Pathom-Aree W,Lumyong S

更新日期：2017-08-01 00:00:00

abstract：:An antibiotic-producing, obligate anaerobic, Gram-stain-negative, catalase- and oxidase-negative strain (JC271T) was isolated from a marine habitat and identified, based on 16S rRNA gene sequence analysis, as a novel member of the family Desulfovibrionaceae. The closest phylogenetic relatives of strain JC271T were fou...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shivani Y,Subhash Y,Sasikala C,Ramana CV

更新日期：2017-01-01 00:00:00

abstract：:Various bacterial species in the genus Pasteuria have great potential as biocontrol agents against plant-parasitic nematodes, although study of this important genus is hampered by the current inability to cultivate Pasteuria species outside their host. To aid in the study of this genus, an extensive 16S rRNA gene sequ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Duan YP,Castro HF,Hewlett TE,White JH,Ogram AV

更新日期：2003-01-01 00:00:00