Can we measure beauty? Computational evaluation of coral reef aesthetics.

abstract：AIM:To prospectively evaluate the effects of vitamin D3 on disease activity and quality of life in ulcerative colitis (UC) patients with hypovitaminosis D. METHODS:The study was a prospective double-blinded, randomized trial conducted at Community Regional Medical Center, Fresno, CA from 2012-2013. Patients with UC an...

journal_title：PeerJ

authors： Mathur J,Naing S,Mills P,Limsui D

更新日期：2017-08-03 00:00:00

abstract：:In functional genomics experiments, researchers often select genes to follow-up or validate from a long list of differentially expressed genes. Typically, sharp thresholds are used to bin genes into groups such as significant/non-significant or fold change above/below a cut-off value, and ad hoc criteria are also used...

journal_title：PeerJ

authors： Lazic SE

更新日期：2015-11-26 00:00:00

abstract：:Burkholderia pseudomallei, the causative agent of melioidosis, is intrinsically resistant to many conventional antibiotics. Therefore, alternative antimicrobial agents such as antimicrobial peptides (AMPs) are extensively studied to combat this issue. Our study aims to identify and understand the mode of action of the...

journal_title：PeerJ

authors： Lee LF,Mariappan V,Vellasamy KM,Lee VS,Vadivelu J

更新日期：2016-10-25 00:00:00

abstract：Background:The influenza virus can cause seasonal infections with mild to severe symptoms, circulating worldwide, and it can affect people in any age group. Therefore, this infection is a serious public health problem that causes severe illness and death in high-risk populations. Every year, 0.5% of the world's populat...

journal_title：PeerJ

authors： Silva T,S Salomon P,Hamerski L,Walter J,B Menezes R,Siqueira JE,Santos A,Santos JAM,Ferme N,Guimarães T,O Fistarol G,I Hargreaves P,Thompson C,Thompson F,Souza TM,Siqueira M,Miranda M

更新日期：2018-10-26 00:00:00

abstract：BACKGROUND:Rare or narrowly endemic organisms are difficult to monitor and conserve when their total distribution and habitat preferences are incompletely known. One method employed in determining distributions of these organisms is species distribution modeling (SDM). METHODS:Using two species of narrowly endemic bur...

journal_title：PeerJ

authors： Rhoden CM,Peterman WE,Taylor CA

更新日期：2017-07-31 00:00:00

abstract：:As other spiny lobsters, Panulirus argus is supposed to use preferentially proteins and lipids in energy metabolism, while carbohydrates are well digested but poorly utilized. The aim of this study was to evaluate the effect of dietary carbohydrate level on digestion and metabolism in the spiny lobster P. argus. We us...

journal_title：PeerJ

authors： Rodríguez-Viera L,Perera E,Montero-Alejo V,Perdomo-Morales R,García-Galano T,Martínez-Rodríguez G,Mancera JM

更新日期：2017-11-03 00:00:00

abstract：Background:This study postulates that underlying environmental conditions and a susceptible population's socio-economic status should be explored simultaneously to adequately understand a vector borne disease infection risk. Here we focus on West Nile Virus (WNV), a mosquito borne pathogen, as a case study for spatial ...

journal_title：PeerJ

authors： Kala AK,Atkinson SF,Tiwari C

更新日期：2020-07-27 00:00:00

abstract：:Construction of hydropower stations has been an important approach to meet China's increasing power demand, but the impact of construction of hydropower stations on river microbiota is not fully understood. To evaluate this, the microbial composition from 18 sampling sites in the downstream of Jinsha River of China, u...

journal_title：PeerJ

authors： Chen X,He D,Zhou L,Cao Y,Li Z

更新日期：2020-07-16 00:00:00

abstract：:Mutations that cause an error in the splicing of a messenger RNA (mRNA) can lead to diseases in humans. Various computational models have been developed to recognize the sequence pattern of the splice sites. In recent studies, Convolutional Neural Network (CNN) architectures were shown to outperform other existing mod...

journal_title：PeerJ

authors： Thanapattheerakul T,Engchuan W,Chan JH

更新日期：2020-07-06 00:00:00

abstract：Background:The effect of fat tissue on a developing individual is fundamentally different from the effect on an adult. Several changes caused by obesity during sexual maturation have an irreversible and severe negative effect (lower fertility, reduced final height, type 2 diabetes mellitus) even for those who have subs...

journal_title：PeerJ

authors： Novak JM,Bruzek J,Zamrazilova H,Vankova M,Hill M,Sedlak P

更新日期：2020-05-11 00:00:00

abstract：:It is an important issue whether microorganisms can live harmoniously with normal cells in the cardiovascular system. The answer to the question will have enormous impact on medical microbiology. To address the issue, it is essential to identify and characterize the bloodborne microbes in an efficient and comprehensiv...

journal_title：PeerJ

authors： Chiu KP,Yu AL

更新日期：2019-08-06 00:00:00

abstract：Background:The need for read-based phasing arises with advances in sequencing technologies. The minimum error correction (MEC) approach is the primary trend to resolve haplotypes by reducing conflicts in a single nucleotide polymorphism-fragment matrix. However, it is frequently observed that the solution with the opti...

journal_title：PeerJ

authors： Lin YY,Wu PC,Chen PL,Oyang YJ,Chen CY

更新日期：2018-10-30 00:00:00

abstract：:Amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD), two late onset neurodegenerative diseases, have been shown to share overlapping cellular pathologies and genetic origins. Studies suggest that a hexanucleotide repeat expansion in the first intron of the C9orf72 gene is the most common cause of fam...

journal_title：PeerJ

authors： Iyer S,Subramanian V,Acharya KR

更新日期：2018-10-17 00:00:00

abstract：:Sugarcane Bacilliform Guadeloupe A Virus (SCBGAV, genus Badnavirus, family Caulimoviridae) is an emerging, deleterious pathogen of sugarcane which presents a substantial barrier to producing high sugarcane earnings. Sugarcane bacilliform viruses (SCBVs) are one of the main species that infect sugarcane. During the las...

journal_title：PeerJ

authors： Ashraf F,Ashraf MA,Hu X,Zhang S

更新日期：2020-01-13 00:00:00

abstract：:The impacts of sea-level rise (SLR) are likely to be the greatest for ecosystems that exist at the land-sea interface, where small changes in sea-level could result in drastic changes in habitat availability. Rocky intertidal ecosystems possess a number of characteristics which make them highly vulnerable to changes i...

journal_title：PeerJ

authors： Kaplanis NJ,Edwards CB,Eynaud Y,Smith JE

更新日期：2020-05-29 00:00:00

abstract：Background:Since 1996, when Vivo questioned how many species of mammals occur in Brazil, there has been a huge effort to assess this biodiversity. In this contribution, we present new records for rare species of the sigmodontine rodent genera Rhagomys and Neusticomys previously unknown to Brazilian Amazon. We provided ...

journal_title：PeerJ

authors： Percequillo AR,Dalapicolla J,Abreu-Júnior EF,Roth PRO,Ferraz KMPMB,Chiquito EA

更新日期：2017-12-15 00:00:00

abstract：BACKGROUND:Amoebiasis is the third most common parasitic cause of morbidity and mortality, particularly in countries with poor hygienic settings. There exists an ambiguity in the diagnosis of amoebiasis, and hence there arises a necessity for a better diagnostic approach. Serine-rich Entamoeba histolyticaprotein (SREHP...

journal_title：PeerJ

authors： Manochitra K,Parija SC

更新日期：2017-06-28 00:00:00

abstract：Background:Foam cells (FCs) play crucial roles in the process of all stages of atherosclerosis. Smooth muscle cells (SMCs) and macrophages are the major sources of FCs. This study aimed to identify the common molecular mechanism in these two types of FCs. Methods:GSE28829, GSE43292, GSE68021, and GSE54666 were include...

journal_title：PeerJ

authors： Zhang K,Qin X,Zhou X,Zhou J,Wen P,Chen S,Wu M,Wu Y,Zhuang J

更新日期：2020-11-17 00:00:00

abstract：:It is deemed important to understand cetacean occurrence and distribution to comprehend their ecological roles. The geographical occurrence of species' niche can be used to better describe their potential distribution. The niche can be defined using environmental variables. Those variables are considered static and no...

journal_title：PeerJ

authors： Figueiredo GCE,do Amaral KB,Santos MCO

更新日期：2020-10-05 00:00:00

abstract：:The origin of recent parallel outbreaks of the high pathogenicity H5N8 avian flu virus in Europe and in Japan can be traced to a single source population, which has most likely been spread by migratory birds. By using Bayesian coalescent methods to analyze the DNA sequences of the virus to find the times for divergenc...

journal_title：PeerJ

authors： Dalby AR,Iqbal M

更新日期：2015-04-30 00:00:00

abstract：:Turbidity currents are the main drivers behind the transportation of terrestrial sediments to the deep sea, and turbidite deposits from such currents have been widely used in geological studies. Nevertheless, the contribution of turbidity currents to vertical displacement of seawater has rarely been discussed. This is...

journal_title：PeerJ

authors： Kawagucci S,Miwa T,Lindsay DJ,Ogura E,Yamamoto H,Nishibayashi K,Yokooka H,Nishi S,Takahashi A,Lee S

更新日期：2020-12-09 00:00:00

abstract：:This work was aimed to investigate the effects of the different particle size of ground alfalfa hay on caecal microbial and archeal communities of rabbits. One hundred-twenty New Zealand rabbits (950.3 ± 8.82 g) were allocated into four treatments, with five replicates in each treatment and six rabbits in each replica...

journal_title：PeerJ

authors： Yuan M,Liu S,Wang Z,Wang L,Xue B,Zou H,Tian G,Cai J,Peng Q

更新日期：2019-10-18 00:00:00

abstract：:The purpose of this study was to investigate the benefits of exercises with different cognitive demands for cognitive functions (Executive and non-Executive) in healthy older adults. A cross-sectional design was adopted. In total, 84 healthy older adults were enrolled in the study. They were categorized into the Tai C...

journal_title：PeerJ

authors： Ji Z,Li A,Feng T,Liu X,You Y,Meng F,Wang R,Lu J,Zhang C

更新日期：2017-10-20 00:00:00

abstract：Background:Systemic inflammation and nutritional status both play roles in the survival of cancer patients. Therefore, it is important to understand the effects of prognostic nutritional index (PNI) and lymphocyte-to-monocyte ratio (LMR) on the survival of patients with advanced p16-negative oropharyngeal cancer. Meth...

journal_title：PeerJ

authors： Tsai MH,Huang TL,Chuang HC,Lin YT,Fang FM,Lu H,Chien CY

更新日期：2020-12-01 00:00:00

abstract：:Prior work in our lab has shown that an expanding image on a computer screen elicits a hiding response in the Caribbean terrestrial hermit crab (Coenobita clypeatus). We conducted two experiments to identify what properties of the expanding stimulus contribute to its effectiveness as a visual threat. First we found th...

journal_title：PeerJ

authors： Shragai T,Ping X,Arakaki C,Garlick D,Blumstein DT,Blaisdell AP

更新日期：2017-11-30 00:00:00

abstract：:We developed a novel method based on the Fourier analysis of protein molecular surfaces to speed up the analysis of the vast structural data generated in the post-genomic era. This method computes the power spectrum of surfaces of the molecular electrostatic potential, whose three-dimensional coordinates have been eit...

journal_title：PeerJ

authors： Carvalho CS,Vlachakis D,Tsiliki G,Megalooikonomou V,Kossida S

更新日期：2013-10-22 00:00:00

abstract：Aim:Historically, the distribution of Sandhill Cranes included much of North America and extending in summer into northeast Russia. In recent years, observations of sandhill cranes in Asia during the non-breeding period have been frequently reported. However, the distribution and abundance of sandhill cranes during the...

journal_title：PeerJ

authors： Gao L,Mi C,Guo Y

更新日期：2019-08-30 00:00:00

abstract：Background:Overweight (OW) is considered a risk for various metabolic diseases. However, its effects as a mechanism that alters the metabolite profiles remain unclear. The purpose of this study is to investigate the effects that OW has on the lipid and metabolite profiles in young adults. Methods:The serum metabolite ...

journal_title：PeerJ

authors： Pasanta D,Chancharunee S,Tungjai M,Kim HJ,Kothan S

更新日期：2019-06-20 00:00:00

abstract：:Carrot is an important root vegetable crop abundant in bioactive compounds including carotenoids, vitamins, and dietary fibers. Carrot intake and its products are gradually growing owing to its high antioxidant activity. Auxins are a class of plant hormones that control many processes of plant growth and development. ...

journal_title：PeerJ

authors： Khadr A,Wang GL,Wang YH,Zhang RR,Wang XR,Xu ZS,Tian YS,Xiong AS

更新日期：2020-12-08 00:00:00

abstract：:Ticks are globally distributed arthropods and a public health concern due to the many human pathogens they carry and transmit, including the causative agent of Lyme disease, Borrelia burgdorferi. As tick species' ranges increase, so do the number of reported tick related illnesses. The microbiome is a critical part of...

journal_title：PeerJ

authors： Gil JC,Helal ZH,Risatti G,Hird SM

更新日期：2020-12-02 00:00:00