Paenibacillus physcomitrellae sp. nov., isolated from the moss Physcomitrella patens.

abstract：:The present study was aimed at reducing the time and labour used to perform DNA-DNA hybridizations for classification of bacteria at the species level. A micro-well-format DNA hybridization method was developed and validated. DNA extractions were performed by a small-scale method and DNA was sheared mechanically into ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Christensen H,Angen O,Mutters R,Olsen JE,Bisgaard M

更新日期：2000-05-01 00:00:00

abstract：:In the course of a taxonomic study describing novel species of the genus Enterobacter it was found that the 16S rRNA gene sequence of the type strain of Enterobacter siamensis, obtained both directly from the authors of the publication on Enterobacter siamensis and from the Korean Collection for Type Cultures (C2361T ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kämpfer P,Doijad S,Chakraborty T,Glaeser SP

更新日期：2016-01-01 00:00:00

abstract：:A thermophilic, sulfate-reducing bacterium, designated strain USBA-053(T), was isolated from a terrestrial hot spring located at a height of 2500 m in the Colombian Andes (5° 45' 33.29″ N 73° 6' 49.89″ W), Colombia. Cells of strain USBA-053(T) were oval- to rod-shaped, Gram-negative and motile by means of a single pol...

journal_title：International journal of systematic and evolutionary microbiology

authors： Baena S,Perdomo N,Carvajal C,Díaz C,Patel BKC

更新日期：2011-04-01 00:00:00

abstract：:A Gram-staining-negative, non-motile, catalase- and oxidase-positive strain, designated MS7(T), was isolated from freshwater of a river near Trabzon, Turkey. Its taxonomy was investigated using a polyphasic approach. The strain grew optimally at 28 °C and pH 7.5 and in the presence of 2.0% NaCl. 16S rRNA gene sequence...

journal_title：International journal of systematic and evolutionary microbiology

authors： Inan K,Kacagan M,Ozer A,Osman Belduz A,Canakci S

更新日期：2015-07-01 00:00:00

abstract：:A novel Gram-stain-negative, flagellated, rod-shaped, yellow-pigmented aerobic bacterium, strain SA925T, that is capable of degrading 1-methylphenanthrene was isolated from oil-polluted soil collected from a refinery located in Guangzhou, China. Phylogenetic analysis based on the 16S rRNA gene sequence demonstrated th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sha S,Zhong J,Chen B,Lin L,Luan T

更新日期：2017-02-01 00:00:00

abstract：:An aerobic, yellow-orange-pigmented, Gram-staining-negative bacterium, designated strain EM44(T), was isolated from seawater on the eastern coast of Jeju Island, Korea. Growth was observed at 15-35 degrees C (optimum 25-30 degrees C), pH 6.5-9.0 (optimum pH 7.0-8.5) and between 1 and 5 % NaCl (w/v) (optimum 2-4 %). Ce...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kahng HY,Lee SS,Kim JM,Jung JY,Lee MY,Park W,Jeon CO

更新日期：2010-07-01 00:00:00

abstract：:Three novel actinobacterial strains, designated as TPS16T, TPS81 and TPS83, were isolated from a sample of marine sediment collected from Tioman Island, Malaysia. The strains formed abundant branched substrate mycelia without fragmentation along with production of blue spores and blue diffusible pigment on soybean mea...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ng ZY,Fang BZ,Li WJ,Tan GYA

更新日期：2019-10-01 00:00:00

abstract：:A bacterial strain designated TQQ6(T) was isolated from a freshwater river in Taiwan and characterized using a polyphasic taxonomy approach. Cells of strain TQQ6(T) were strictly aerobic, Gram-staining-negative, poly-β-hydroxybutyrate-containing, non-motile, non-spore-forming, long rods surrounded by a thick capsule a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sheu SY,Chen YS,Shiau YW,Chen WM

更新日期：2013-10-01 00:00:00

abstract：:Two Gram-stain-negative and facultative anaerobic bacteria, designated strains SYSU G00088T and YIM 73032, were isolated from sediment samples collected from hot springs in Tibet, China. Based on the analyses of the 16S rRNA gene sequences, the two isolates were observed to be a member of the family Comamonadaceae, sh...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ding YP,Khan IU,Li MM,Xian WD,Liu L,Zhou EM,Salam N,Li WJ

更新日期：2019-02-01 00:00:00

abstract：:A novel non-sporulating, non-motile, catalase- and oxidase-positive, strictly aerobic, Gram-negative, rod-shaped bacterial strain, designated DCA-1(T), was isolated from activated sludge collected from a butachlor wastewater treatment facility. The strain was able to degrade about 85 % of 100 mg butachlor l(-1) within...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zheng JW,Chen YG,Zhang J,Ni YY,Li WJ,He J,Li SP

更新日期：2011-08-01 00:00:00

abstract：:A coccal-shaped organism, designated 516(T), was isolated from yan-tsai-shin (fermented broccoli stems), a traditional fermented food in Taiwan. 16S rRNA gene sequencing results showed that strain 516(T) had 98.9 % sequence similarity to that of the type strain Lactococcus garvieae NBRC 100934(T). Comparison of three ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen YS,Otoguro M,Lin YH,Pan SF,Ji SH,Yu CR,Liou MS,Chang YC,Wu HC,Yanagida F

更新日期：2014-01-01 00:00:00

abstract：:A Gram-stain-negative, aerobic, non-spore-forming, motile by gliding and coccoid, ovoid or rod-shaped bacterial strain, designated GHTF-27T, was isolated from a tidal flat at Goheung, South Korea, and subjected to a taxonomic study using a polyphasic approach. The novel strain grew optimally at 30 °C, at pH 7.0-8.0 an...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park S,Yoon SY,Jung YT,Won SM,Yoon JH

更新日期：2016-07-01 00:00:00

abstract：:A novel Gram-negative, rod-coccus shaped, non-motile, strain, RS-3(T), was isolated from a sediment sample collected from the marine transect of Kongsfjorden, Ny-Ålesund, Svalbard, Arctic. Colonies and broth cultures were yellowish in colour due to the presence of carotenoids. Strain RS-3(T) was positive for oxidase, ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Begum Z,Srinivas TNR,Manasa P,Sailaja B,Sunil B,Prasad S,Shivaji S

更新日期：2013-05-01 00:00:00

abstract：:A novel actinomycete, designated strain NEAU-G9T, was isolated from the root of Polygonatum odoratum (Mill.) collected from Harbin, Heilongjiang province, north China, and was characterized using a polyphasic approach. Key morphological and chemotaxonomic properties confirmed the affiliation of strain NEAU-G9T to the ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Guo S,Liu C,Liu S,Guan X,Guo L,Jia F,Wang X,Xiang W

更新日期：2016-03-01 00:00:00

abstract：:A polyphasic taxonomic study was performed on six strains of an unknown Gram-positive, non-motile, spore-forming, short oval to rod-shaped bacterium isolated from a swine-manure storage pit. In addition to these strains, an isolate deposited in the Culture Collection of the University of Göteborg (Sweden) was found to...

journal_title：International journal of systematic and evolutionary microbiology

authors： Cotta MA,Whitehead TR,Falsen E,Moore E,Lawson PA

更新日期：2009-01-01 00:00:00

abstract：:A Gram-stain-negative, orange-pigmented, non-spore-forming, non-motile, aerobic, rod-shaped bacterial strain, designated CAU 1131T, was isolated from reclaimed land. Strain CAU 1131T grew optimally at 30 °C and at pH 6.5 in the presence of 4 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed t...

journal_title：International journal of systematic and evolutionary microbiology

authors： Oh M,Kim JH,Bora N,Kim W

更新日期：2017-01-01 00:00:00

abstract：:The taxonomic position of the halophilic actinobacterial strain, HS05-03T, isolated from solar saltern soil, was determined using a polyphasic approach. Phylogenetic analysis based on the 16S rRNA gene sequence of the strain showed that it formed a distinct evolutionary lineage in the genus Actinopolyspora. The organi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Duangmal K,Suksaard P,Pathom-Aree W,Mingma R,Matsumoto A,Takahashi Y

更新日期：2016-04-01 00:00:00

abstract：:Strain DCY24(T), a Gram-reaction-positive, aerobic, rod-shaped, motile bacterium, was isolated from soil of a ginseng field in South Korea. According to 16S rRNA gene sequence analysis, it was closely related to Nocardioides aromaticivorans DSM 15131(T) (95.1 % similarity), Nocardioides simplex KCTC 9106(T) (95.0 %), ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim MK,Srinivasan S,Park MJ,Sathiyaraj G,Kim YJ,Yang DC

更新日期：2009-11-01 00:00:00

abstract：:This taxonomic note reviews the present status of the nomenclature of the cyanobacteria under the Bacteriological Code. No more than 13 names of cyanobacterial species have been proposed so far in the International Journal of Systematic and Evolutionary Microbiology (IJSEM)/International Journal of Systematic Bacterio...

journal_title：International journal of systematic and evolutionary microbiology

authors： Oren A

更新日期：2004-09-01 00:00:00

abstract：:A Gram-stain-positive, aerobic, motile, rod-shaped, endospore-forming bacterium, designated strain R55T, was isolated from the liverwort Herbertus sendtneri growing at Gawalong glacier, Tibet, and characterized by using a polyphasic taxonomic approach. The major fatty acids of strain R55T were anteiso-C15 : 0, C16 : 0...

journal_title：International journal of systematic and evolutionary microbiology

authors： Guo GN,Zhou X,Chen ZL,Yang ZW,Li XD,Li YH

更新日期：2016-02-01 00:00:00

abstract：:A gram-type positive, motile, coccus-shaped organism was isolated from a radioactive work area. Strain SRS30216T is an orange-pigmented bacterium that is catalase-positive, oxidase-negative and urease-negative. The orange pigment is most likely a carotenoid with absorption peaks at approximately 444, 471 and 501 nm. C...

journal_title：International journal of systematic and evolutionary microbiology

authors： Phillips RW,Wiegel J,Berry CJ,Fliermans C,Peacock AD,White DC,Shimkets LJ

更新日期：2002-05-01 00:00:00

abstract：:We performed a comparative genomic analysis to clarify the taxonomic relationship between the two Enterobacter species, Enterobacter tabaci and Enterobacter mori. Whole genome sequences of types strains of the two species became available recently. Average nucleotide identity (ANI) and in silico DNA-DNA hybridization ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wu W,Zong Z

更新日期：2020-02-01 00:00:00

abstract：:Pectobacterium isolates SS95T, SS54 and SS56 were collected from a potato field in the Chiniot district in the plains of the Punjab province, Pakistan. Sequencing of the gapA barcode revealed that these strains belong to a novel phylogenetic group separated from P.ectobacterium wasabiae and Pectobacterium parmentieri ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sarfraz S,Riaz K,Oulghazi S,Cigna J,Sahi ST,Khan SH,Faure D

更新日期：2018-11-01 00:00:00

abstract：:An alkaliphilic actinobacterial strain, designated EGI 80099(T), was isolated from a rhizosphere soil sample of Reaumuria soongorica found in the desert soils of Fukang, Xinjiang, north-west China. Cells of strain EGI 80099(T) were Gram-stain-positive, non-motile, non-endospore-forming cocci. The predominant menaquino...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang HF,Zhang YG,Chen JY,Hozzein WN,Li L,Wadaan MAM,Zhang YM,Li WJ

更新日期：2014-12-01 00:00:00

abstract：:A bacterial strain, UDC377(T), was isolated from seawater samples collected at Seo-do on the coast of Dokdo island in the East Sea, and was subjected to taxonomic study using a polyphasic approach. Strain UDC377(T) was pale-yellow, Gram-staining-negative, non-motile, rod-shaped and aerobic. The strain grew optimally a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sung HR,Shin KS,Ghim SY

更新日期：2015-02-01 00:00:00

abstract：:An obligately aerobic, Gram-negative, non-motile, pale-pink-pigmented, rod-shaped strain, designated Shu-9-SY12-35C(T), was isolated from seawater in Jodogahama, Iwate, Japan, and was subjected to a polyphasic taxonomic examination. Phylogenetic analyses based on the 16S rRNA gene sequence revealed that the novel isol...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon J,Ishikawa S,Kasai H,Yokota A

更新日期：2007-05-01 00:00:00

abstract：:The taxonomic position of a group of mesophilic actinomycetes isolated from arid Australian soils was determined using a polyphasic approach. The organisms shared chemical and morphological markers typical of members of the genus Amycolatopsis. They had identical 16S rRNA gene sequences and formed a distinct phyletic ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tan GYA,Robinson S,Lacey E,Goodfellow M

更新日期：2006-10-01 00:00:00

abstract：:The generic position of an actinomycete strain, 'Pseudonocardia sp.' IMSNU 22139, was investigated by the phylogenetic analysis of 16S rDNA sequence. Comparative studies of 16S rDNA sequences indicated that this organism consistently formed a distinct clade within the radiation of the genus Amycolatopsis of the family...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee SD,Hah YC

更新日期：2001-03-01 00:00:00

abstract：:Two Gram-negative, non-motile, non-spore-forming coccoid bacteria (strains F8/08-60(T) and F8/08-61) isolated from clinical specimens obtained from baboons (Papio spp.) that had delivered stillborn offspring were subjected to a polyphasic taxonomic study. On the basis of 16S rRNA gene sequence similarities, both strai...

journal_title：International journal of systematic and evolutionary microbiology

authors： Whatmore AM,Davison N,Cloeckaert A,Al Dahouk S,Zygmunt MS,Brew SD,Perrett LL,Koylass MS,Vergnaud G,Quance C,Scholz HC,Dick EJ,Hubbard G,Schlabritz-Loutsevitch NE

更新日期：2014-12-01 00:00:00

abstract：:A Gram-stain-negative, strictly aerobic, rod- or oval-shaped, motile, non-spore-forming bacterium, designated strain CC-AMHB-3(T), was isolated from coastal surface seawater off Hualien, Taiwan. The novel strain showed high pairwise 16S rRNA gene sequence similarities to Ruegeria mobilis NBRC 101030(T) (96.5%), Rueger...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hameed A,Shahina M,Lin SY,Lai WA,Liu YC,Hsu YH,Young CC

更新日期：2014-11-01 00:00:00