Protein conformational dynamics dictate the binding affinity for a ligand.

Abstract:

:Interactions between a protein and a ligand are essential to all biological processes. Binding and dissociation are the two fundamental steps of ligand-protein interactions, and determine the binding affinity. Intrinsic conformational dynamics of proteins have been suggested to play crucial roles in ligand binding and dissociation. Here, we demonstrate how protein dynamics dictate the binding and dissociation of a ligand through a single-molecule kinetic analysis for a series of maltose-binding protein mutants that have different intrinsic conformational dynamics and dissociation constants for maltose. Our results provide direct evidence that the ligand dissociation is determined by the intrinsic opening rate of the protein.

journal_name

Nat Commun

journal_title

Nature communications

authors

Seo MH,Park J,Kim E,Hohng S,Kim HS

doi

10.1038/ncomms4724

subject

Has Abstract

pub_date

2014-04-24 00:00:00

pages

3724

issn

2041-1723

pii

ncomms4724

journal_volume

5

pub_type

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