Isolation and characterization of cul1-7, a recessive allele of CULLIN1 that disrupts SCF function at the C terminus of CUL1 in Arabidopsis thaliana.

Abstract:

:Many aspects of plant biology depend on the ubiquitin proteasome system for degradation of regulatory proteins. Ubiquitin E3 ligases confer substrate specificity in this pathway, and SCF-type ligases comprise a major class of E3s. SCF ligases have four subunits: SKP1, CUL1, RBX1, and an F-box protein for substrate recognition. The Aux/IAAs are a well-characterized family of SCF substrates in plants. Here, we report characterization of a mutant isolated from a genetic screen in Arabidopsis thaliana designed to identify plants defective in degradation of an Aux/IAA fusion protein, Aux/IAA1-luciferase (IAA1-LUC). This mutant exhibited fourfold slower IAA1-LUC degradation compared with the progenitor line, and seedlings displayed altered auxin responses. Experiments identified the mutant as an allele of CUL1, named cul1-7. The cul1-7 mutation affects the C terminus of the protein, results in reduced cul1-7 levels, and interferes with RBX1 interaction. cul1-7 seedlings are defective in degradation of an endogenous SCF substrate, Repressor of ga1-3 (RGA), and have altered responses to gibberellins. cul1-7 seedlings exhibit slower degradation of the light-labile red/far-red photoreceptor phytochrome A and are photomorphogenic in the dark. This mutation represents the first reported allele of CUL1 to directly affect subunit interactions at the CUL1 C terminus.

journal_name

Genetics

journal_title

Genetics

authors

Gilkerson J,Hu J,Brown J,Jones A,Sun TP,Callis J

doi

10.1534/genetics.108.097675

subject

Has Abstract

pub_date

2009-03-01 00:00:00

pages

945-63

issue

3

eissn

0016-6731

issn

1943-2631

pii

genetics.108.097675

journal_volume

181

pub_type

杂志文章

相关文献

GENETICS文献大全
  • Cytogenetic analysis of chromosome region 73AD of Drosophila melanogaster.

    abstract::The 73AD salivary chromosome region of Drosophila melanogaster was subjected to mutational analysis in order to (1) generate a collection of chromosome breakpoints that would allow a correlation between the genetic, cytological and molecular maps of the region and (2) define the number and gross organization of comple...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Belote JM,Hoffmann FM,McKeown M,Chorsky RL,Baker BS

    更新日期:1990-08-01 00:00:00

  • The EGL-4 PKG acts with KIN-29 salt-inducible kinase and protein kinase A to regulate chemoreceptor gene expression and sensory behaviors in Caenorhabditis elegans.

    abstract::The regulation of chemoreceptor (CR) gene expression by environmental signals and internal cues may contribute to the modulation of multiple physiological processes and behavior in Caenorhabditis elegans. We previously showed that KIN-29, a homolog of salt-inducible kinase, acts in sensory neurons to regulate the expr...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.108.094771

    authors: van der Linden AM,Wiener S,You YJ,Kim K,Avery L,Sengupta P

    更新日期:2008-11-01 00:00:00

  • Study designs for identification of rare disease variants in complex diseases: the utility of family-based designs.

    abstract::The recent progress in sequencing technologies makes possible large-scale medical sequencing efforts to assess the importance of rare variants in complex diseases. The results of such efforts depend heavily on the use of efficient study designs and analytical methods. We introduce here a unified framework for associat...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.111.131813

    authors: Ionita-Laza I,Ottman R

    更新日期:2011-11-01 00:00:00

  • Genetic interaction between integrins and moleskin, a gene encoding a Drosophila homolog of importin-7.

    abstract::The Drosophila PS1 and PS2 integrins are required to maintain the connection between the dorsal and ventral wing epithelia. If alphaPS subunits are inappropriately expressed during early pupariation, the epithelia separate, causing a wing blister. Two lines of evidence indicate that this apparent loss-of-function phen...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Baker SE,Lorenzen JA,Miller SW,Bunch TA,Jannuzi AL,Ginsberg MH,Perkins LA,Brower DL

    更新日期:2002-09-01 00:00:00

  • A powerful and adaptive association test for rare variants.

    abstract::This article focuses on conducting global testing for association between a binary trait and a set of rare variants (RVs), although its application can be much broader to other types of traits, common variants (CVs), and gene set or pathway analysis. We show that many of the existing tests have deteriorating performan...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.165035

    authors: Pan W,Kim J,Zhang Y,Shen X,Wei P

    更新日期:2014-08-01 00:00:00

  • Two mutations in a maize bronze-1 allele caused by transposable elements of the Ac-Ds family alter the quantity and quality of the gene product.

    abstract::The Dissociation (Ds) mutant, Bz-wm, of the maize bronze-1 (bz) locus conditions a leaky phenotype. Plants carrying this mutant allele synthesize a low amount of an altered Bz gene product, which leads to reduced anthocyanin pigmentation in the seed. The molecular analysis reported here shows that the Bz-wm mutant has...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Schiefelbein JW,Furtek DB,Dooner HK,Nelson OE Jr

    更新日期:1988-11-01 00:00:00

  • An ancestral recombination graph for diploid populations with skewed offspring distribution.

    abstract::A large offspring-number diploid biparental multilocus population model of Moran type is our object of study. At each time step, a pair of diploid individuals drawn uniformly at random contributes offspring to the population. The number of offspring can be large relative to the total population size. Similar "heavily ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.112.144329

    authors: Birkner M,Blath J,Eldon B

    更新日期:2013-01-01 00:00:00

  • Interphase chromosome arrangement in Arabidopsis thaliana is similar in differentiated and meristematic tissues and shows a transient mirror symmetry after nuclear division.

    abstract::Whole-mount fluorescence in situ hybridization (FISH) was applied to Arabidopsis thaliana seedlings to determine the three-dimensional (3D) interphase chromosome territory (CT) arrangement and heterochromatin location within the positional context of entire tissues or in particular cell types of morphologically well-p...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.107.073270

    authors: Berr A,Schubert I

    更新日期:2007-06-01 00:00:00

  • Identity coefficients in finite populations. I. Evolution of identity coefficients in a random mating diploid dioecious population.

    abstract::Properties of identity relation between genes are discussed, and a derivation of recurrent equations of identity coefficients in a random mating, diploid dioecious population is presented. Computations are run by repeated matrix multiplication. Results show that for effective population size (Ne) larger than 16 and no...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Chevalet C,Gillois M,Nassar RF

    更新日期:1977-07-01 00:00:00

  • HOP1: a yeast meiotic pairing gene.

    abstract::The recessive mutation, hop1-1, was isolated by use of a screen designed to detect mutations defective in homologous chromosomal pairing during meiosis in Saccharomyces cerevisiae. Mutants in HOP1 displayed decreased levels of meiotic crossing over and intragenic recombination between markers on homologous chromosomes...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Hollingsworth NM,Byers B

    更新日期:1989-03-01 00:00:00

  • Smg1 nonsense mutations do not abolish nonsense-mediated mRNA decay in Drosophila melanogaster.

    abstract::Smg1 is a key component of nonsense-mediated decay (NMD) in Caenorhabditis elegans and mammals. Here we report that two nonsense alleles of the ortholog of Smg1 do not affect NMD in Drosophila melanogaster. ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.105.045674

    authors: Chen Z,Smith KR,Batterham P,Robin C

    更新日期:2005-09-01 00:00:00

  • The SPT10 and SPT21 genes of Saccharomyces cerevisiae.

    abstract::Mutations in the SPT10 and SPT21 genes were originally isolated as suppressors of Ty and LTR (delta) insertion mutations in Saccharomyces cerevisiae, and the genes were shown to be required for normal transcription at a number of loci in yeast. Now we have cloned, sequenced, mapped and mutagenized SPT10 and SPT21. Sin...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Natsoulis G,Winston F,Boeke JD

    更新日期:1994-01-01 00:00:00

  • The population genetics of adaptation: multiple substitutions on a smooth fitness landscape.

    abstract::Much recent work in the theoretical study of adaptation has focused on the so-called strong selection-weak mutation (SSWM) limit, wherein adaptation is due to new mutations of definite selective advantage. This work, in turn, has focused on the first step (substitution) during adaptive evolution. Here we extend this t...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.109.106757

    authors: Unckless RL,Orr HA

    更新日期:2009-11-01 00:00:00

  • Direction of travel of RecBC recombinase through bacteriophage lambda DNA.

    abstract::We examined linkage relationships for RecBC-mediated recombination in lytic cycle crosses of lambda phages bearing two cohesive end sites (cos) oriented in the same direction. The relationships obtained imply that a given recombinant tends to be packaged from the cos site that is the nearer one to the right of the exc...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Stahl FW,Kobayashi I,Thaler D,Stahl MM

    更新日期:1986-06-01 00:00:00

  • A novel nonnull ZIP1 allele triggers meiotic arrest with synapsed chromosomes in Saccharomyces cerevisiae.

    abstract::During meiotic prophase, assembly of the synaptonemal complex (SC) brings homologous chromosomes into close apposition along their lengths. The Zip1 protein is a major building block of the SC in Saccharomyces cerevisiae. In the absence of Zip1, SC fails to form, cells arrest or delay in meiotic prophase (depending on...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.107.071100

    authors: Mitra N,Roeder GS

    更新日期:2007-06-01 00:00:00

  • Multigene family of ribosomal DNA in Drosophila melanogaster reveals contrasting patterns of homogenization for IGS and ITS spacer regions. A possible mechanism to resolve this paradox.

    abstract::The multigene family of rDNA in Drosophila reveals high levels of within-species homogeneity and between-species diversity. This pattern of mutation distribution is known as concerted evolution and is considered to be due to a variety of genomic mechanisms of turnover (e.g., unequal crossing over and gene conversion) ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Polanco C,González AI,de la Fuente,Dover GA

    更新日期:1998-05-01 00:00:00

  • Accumulation of deleterious mutations in small abiotic populations of RNA.

    abstract::The accumulation of slightly deleterious mutations in populations leads to the buildup of a genetic load and can cause the extinction of populations of small size. Mutation-accumulation experiments have been used to study this process in a wide variety of organisms, yet the exact mutational underpinnings of genetic lo...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.106.066142

    authors: Soll SJ,Díaz Arenas C,Lehman N

    更新日期:2007-01-01 00:00:00

  • Genetic Architectures of Quantitative Variation in RNA Editing Pathways.

    abstract::RNA editing refers to post-transcriptional processes that alter the base sequence of RNA. Recently, hundreds of new RNA editing targets have been reported. However, the mechanisms that determine the specificity and degree of editing are not well understood. We examined quantitative variation of site-specific editing i...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.179481

    authors: Gu T,Gatti DM,Srivastava A,Snyder EM,Raghupathy N,Simecek P,Svenson KL,Dotu I,Chuang JH,Keller MP,Attie AD,Braun RE,Churchill GA

    更新日期:2016-02-01 00:00:00

  • The probability of fixation in populations of changing size.

    abstract::The rate of adaptive evolution of a population ultimately depends on the rate of incorporation of beneficial mutations. Even beneficial mutations may, however, be lost from a population since mutant individuals may, by chance, fail to reproduce. In this paper, we calculate the probability of fixation of beneficial mut...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Otto SP,Whitlock MC

    更新日期:1997-06-01 00:00:00

  • The genes for mouse salivary androgen-binding protein (ABP) subunits alpha and gamma are located on chromosome 7.

    abstract::We demonstrate that the previously described gene Androgen binding protein (Abp; Dlouhy and Karn, 1984) codes for the Alpha subunit of ABP and rename the locus Androgen binding protein alpha (Abpa). A study of recombinant inbred strains demonstrates that Abpa is located on chromosome 7 near Glucose phosphate isomerase...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Dlouhy SR,Taylor BA,Karn RC

    更新日期:1987-03-01 00:00:00

  • The Schizosaccharomyces pombe rec16 gene product regulates multiple meiotic events.

    abstract::Previously isolated meiotic recombination (rec) mutants of Schizosaccharomyces pombe define 16 complementation groups. The rec genes cloned and sequenced to date reveal little amino acid sequence identity to other reported proteins. We examined the rec mutants for alterations in meiotic events other than recombination...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Li YF,Smith GR

    更新日期:1997-05-01 00:00:00

  • Analysis of the albino-locus region of the mouse: IV. Characterization of 34 deficiencies.

    abstract::Thirty-four independent nonviable c-locus mutations (types cal, albino lethal and cas, albino subvital), derived from radiation experiments, were tested for involvement of nearby markers tp, Mod-2, sh-1, and Hbb: 10, 22, and 2 involved, respectively, none of these markers, Mod-2 alone, and Mod-2 plus sh-1. When classi...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Russell LB,Montgomery CS,Raymer GD

    更新日期:1982-03-01 00:00:00

  • A genomics approach to the detection of positive selection in cattle: adaptive evolution of the T-cell and natural killer cell-surface protein CD2.

    abstract::The detection of adaptive evolution at the molecular level is of interest not only as an insight into the process of evolution but also because of its functional implications for genes of interest. Here, we present the first genomics approach to detecting positive selection operating on the Bos taurus lineage, an impo...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.039040

    authors: Lynn DJ,Freeman AR,Murray C,Bradley DG

    更新日期:2005-07-01 00:00:00

  • A non-Mendelian MAPK-generated hereditary unit controlled by a second MAPK pathway in Podospora anserina.

    abstract::The Podospora anserina PaMpk1 MAP kinase (MAPK) signaling pathway can generate a cytoplasmic and infectious element resembling prions. When present in the cells, this C element causes the crippled growth (CG) cell degeneration. CG results from the inappropriate autocatalytic activation of the PaMpk1 MAPK pathway durin...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.112.139469

    authors: Lalucque H,Malagnac F,Brun S,Kicka S,Silar P

    更新日期:2012-06-01 00:00:00

  • cin-4, a gene with homology to topoisomerase II, is required for centromere resolution by cohesin removal from sister kinetochores during mitosis.

    abstract::The back-to-back geometry of sister kinetochores is essential in preventing loss or damage of chromosomes during mitosis. Kinetochore orientation is generated in part by a process of resolving kinetochores at the centromere (centromere resolution) prior to spindle interactions. Because few of the genes required for ce...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.107.075275

    authors: Stanvitch G,Moore LL

    更新日期:2008-01-01 00:00:00

  • Poor performance of bootstrap confidence intervals for the location of a quantitative trait locus.

    abstract::The aim of many genetic studies is to locate the genomic regions (called quantitative trait loci, QTL) that contribute to variation in a quantitative trait (such as body weight). Confidence intervals for the locations of QTL are particularly important for the design of further experiments to identify the gene or genes...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.106.061549

    authors: Manichaikul A,Dupuis J,Sen S,Broman KW

    更新日期:2006-09-01 00:00:00

  • Counteracting Environmental Chemicals with Coenzyme Q10: An Educational Primer for Use with "Antioxidant CoQ10 Restores Fertility by Rescuing Bisphenol A-Induced Oxidative DNA Damage in the Caenorhabditis elegans Germline".

    abstract::Environmental toxicants are chemicals that negatively affect human health. Although there are numerous ways to limit exposure, the ubiquitous nature of certain environmental toxicants makes it impossible to avoid them entirely. Consequently, scientists are continuously working toward developing strategies for combatin...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.120.303577

    authors: Bradford BR,Briand NE,Fassnacht N,Gervasio ED,Nowakowski AM,FitzGibbon TC,Maurina S,Benjamin AV,Kelly M,Checchi PM

    更新日期:2020-12-01 00:00:00

  • Quantitative trait loci for the circadian clock in Neurospora crassa.

    abstract::Neurospora crassa has been a model organism for the study of circadian clocks for the past four decades. Among natural accessions of Neurospora crassa, there is significant variation in clock phenotypes. In an attempt to investigate natural allelic variants contributing to quantitative variation, we used a quantitativ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.107.077958

    authors: Kim TS,Logsdon BA,Park S,Mezey JG,Lee K

    更新日期:2007-12-01 00:00:00

  • Identification of functionally related genes that stimulate early meiotic gene expression in yeast.

    abstract::Meiosis and spore formation in the yeast Saccharomyces cerevisiae are associated with increased expression of sporulation-specific genes. One of these genes, IME2, encodes a putative protein kinase that is a positive regulator of other sporulation-specific genes. We have isolated mutations that cause reduced expressio...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Su SS,Mitchell AP

    更新日期:1993-01-01 00:00:00

  • A 140-bp-long palindromic sequence induces double-strand breaks during meiosis in the yeast Saccharomyces cerevisiae.

    abstract::Palindromic sequences have the potential to form hairpin or cruciform structures, which are putative substrates for several nucleases and mismatch repair enzymes. A genetic method was developed to detect such structures in vivo in the yeast Saccharomyces cerevisiae. Using this method we previously showed that short ha...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Nag DK,Kurst A

    更新日期:1997-07-01 00:00:00