Desulfotignum toluenicum sp. nov., a novel toluene-degrading, sulphate-reducing bacterium isolated from an oil-reservoir model column.

Abstract:

:A Gram-negative, sulphate-reducing bacterium (strain H3(T)) was isolated from an oil-reservoir model column. The new isolate was able to oxidize toluene coupled to hydrogen sulphide production. For growth, the optimum salt concentration was 1.5 % (w/v), the optimum pH was 7.2 and the optimum temperature was 34 degrees C. The cells were straight to slightly curved rods, 0.6-1.0 microm in diameter and 1.4-2.5 microm in length. The predominant fatty acids were C(16 : 0), C(16 : 1)omega7c and C(17 : 0) cyclo, and the cells also contained dimethylacetals. Cloning and sequencing of a 1505 bp long fragment of the 16S rRNA gene showed that strain H3(T) is a member of the Deltaproteobacteria and is related closely to Desulfotignum balticum DSM 7044(T). The G+C content of the DNA was 52.0 mol% and the DNA-DNA similarity to D. balticum DSM 7044(T) was 56.1 %. Based on differences in DNA sequence and the unique property of toluene degradation, it is proposed that strain H3(T) should be designated a member of a novel species within the genus Desulfotignum, for which the name Desulfotignum toluenicum sp. nov. is proposed. The type strain is H3(T) (=DSM 18732(T)=ATCC BAA-1460(T)).

authors

Ommedal H,Torsvik T

doi

10.1099/ijs.0.65067-0

subject

Has Abstract

pub_date

2007-12-01 00:00:00

pages

2865-2869

issue

Pt 12

eissn

1466-5026

issn

1466-5034

journal_volume

57

pub_type

杂志文章
  • Photobacterium histaminum Okuzumi et al. 1994 is a later subjective synonym of Photobacterium damselae subsp. damselae (Love et al. 1981) Smith et al. 1991.

    abstract::The type strain of Photobacterium histaminum, JCM 8968T (= ATCC 51805T), and that of Photobacterium damselae subsp. damselae, ATCC 33539T, exhibit 100% identity in their 16S rRNA sequence, more than 80% DNA-DNA homology and only one phenotypic difference. Also, like P. histaminum, P. damselae subsp. damselae was shown...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-3-1339

    authors: Kimura B,Hokimoto S,Takahashi H,Fujii T

    更新日期:2000-05-01 00:00:00

  • Multigene characterization of a new 'Candidatus Phytoplasma rubi'-related strain associated with blackberry witches' broom.

    abstract::A new phytoplasma was identified in naturally infected blackberry plants exhibiting witches' broom symptoms in Portugal. The 16S rRNA gene sequence revealed that it is related to 'Candidatus Phytoplasma rubi' (16SrV-E ribosomal subgroup) and RFLP analysis revealed a unique profile following MseI endonuclease digestion...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000871

    authors: Fránová J,de Sousa E,Koloniuk I,Mimoso C,Matos J,Cardoso F,Contaldo N,Paltrinieri S,Bertaccini A

    更新日期:2016-03-01 00:00:00

  • Proposal of Rhodoplanes tepidamans sp. nov. to accommodate the thermotolerant phototrophic bacterium previously referred to as 'Rhodoplanes (Rhodopseudomonas) cryptolactis'.

    abstract::Previously we proposed the reclassification of a thermotolerant phototrophic bacterium, 'Rhodopseudomonas cryptolactis' Stadtwald-Demchick et al. 1990, as 'Rhodoplanes cryptolactis' nom. rev., comb. nov. with strain DSM 9987T (ATCC 49414T) as the type strain. However, while both the names 'Rhodopseudomonas cryptolacti...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001752

    authors: Hiraishi A,Okamura K

    更新日期:2017-05-01 00:00:00

  • Ravibacter arvi gen. nov., sp. nov., isolated from farmland soil during development of new culture techniques.

    abstract::Two novel strains, J77-1T and J76-1, were isolated from farmland soil and were taxonomically characterized by a polyphasic approach. Both strains were yellow, Gram-stain-negative, strictly aerobic, non-motile and rod-shaped bacteria. These strains were non-sporulating, catalase-positive and oxidase-negative. J77-1T an...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002456

    authors: Chaudhary DK,Dahal RH,Altankhuu K,Kim J

    更新日期:2017-12-01 00:00:00

  • Luteimicrobium xylanilyticum sp. nov., isolated from the gut of a long-horned beetle, Massicus raddei.

    abstract::A novel strain, designated W-15(T), was isolated from the gut of a long-horned beetle, Massicus raddei, collected in South Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the strains belonged to the suborder Micrococcineae. Strain W-15(T) was most closely related to Luteimicrobium album RI1...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.048991-0

    authors: Kim H,Oh HW,Kim JA,Park DS,Park HM,Bae KS

    更新日期:2014-04-01 00:00:00

  • Sphingobium rhizovicinum sp. nov., isolated from rhizosphere soil of Fortunella hindsii (Champ. ex Benth.) Swingle.

    abstract::The taxonomic status of a pale-yellow-coloured bacterial isolate from rhizosphere soil of Fortunella hindsii (Champ. ex Benth.) Swingle was characterized using a polyphasic taxonomic approach. Comparative analysis of the 16S rRNA gene sequence showed that the isolate constituted a distinct branch within the genus Sphi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65564-0

    authors: Young CC,Arun AB,Kämpfer P,Busse HJ,Lai WA,Chen WM,Shen FT,Rekha PD

    更新日期:2008-08-01 00:00:00

  • Reclassification of Thiomicrospira hydrogeniphila (Watsuji et al. 2016) to Thiomicrorhabdus hydrogeniphila comb. nov., with emended description of Thiomicrorhabdus (Boden et al., 2017).

    abstract::The genus Thiomicrorhabdus (Tmr) in the Piskirickettsiaceae in the Thiotrichales of the Gammaproteobacteria contains four species of sulfur-oxidising obligate chemolithoautotroph with validly published names, all previously classified as Thiomicrospira (Tms) species. Here we demonstrate that Thiomicrospira hydrogeniph...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002279

    authors: Boden R,Scott KM,Rae AW,Hutt LP

    更新日期:2017-10-01 00:00:00

  • Halobacterium piscisalsi Yachai et al. 2008 is a later heterotypic synonym of Halobacterium salinarum Elazari-Volcani 1957.

    abstract::Halobacterium piscisalsi was proposed by Yachai et al. (2008), with a single strain, HPC1-2(T) (= BCC 24372(T) = JCM 14661(T) = PCU 302(T)), which was isolated from fermented fish (pla-ra) in Thailand. According to Yachai et al. (2008), the strain was closely related to Halobacterium salinarum based on 16S rRNA gene s...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.036905-0

    authors: Minegishi H,Echigo A,Shimane Y,Kamekura M,Tanasupawat S,Visessanguan W,Usami R

    更新日期:2012-09-01 00:00:00

  • New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences.

    abstract::The partial 60 kDa heat-shock protein (HSP60) genes of 36 Bifidobacterium strains representing 30 different Bifidobacterium species and subspecies and of the type strain of Gardnerella vaginalis were cloned and sequenced using a pair of universal degenerate HSP60 PCR primers. The HSP60 DNA sequence similarities were d...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-5-1633

    authors: Jian W,Zhu L,Dong X

    更新日期:2001-09-01 00:00:00

  • Lactobacillus furfuricola sp. nov., isolated from Nukadoko, rice bran paste for Japanese pickles.

    abstract::Two strains of lactic acid bacteria, Nu27(T) and Nu29, were isolated from Nukadoko, rice bran paste for Japanese pickles. The isolates were Gram-stain-positive, rod-shaped, catalase-negative, non-motile and facultatively anaerobic lactic acid bacteria. The isolates showed identical 16S rRNA gene sequences. The closest...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.063933-0

    authors: Irisawa T,Tanaka N,Kitahara M,Sakamoto M,Ohkuma M,Okada S

    更新日期:2014-08-01 00:00:00

  • Recognition of nomenclatural standing of Salmonella typhi (Approved Lists 1980), Salmonella enteritidis (Approved Lists 1980) and Salmonella typhimurium (Approved Lists 1980), and conservation of the specific epithets enteritidis and typhimurium. Request

    abstract::In 1994, the Judicial Commission of the ICSB announced that Le Minor and Popoff's Request for an Opinion in 1987 to designate Salmonella enterica sp. nov., nom. rev. as the type and only species of the genus Salmonella was denied. Thus, the current species of the genus Salmonella are Salmonella typhimurium, Salmonella...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-2-945

    authors: Ezaki T,Kawamura Y,Yabuuchi E

    更新日期:2000-03-01 00:00:00

  • Characterization of Peptacetobacter hominis gen. nov., sp. nov., isolated from human faeces, and proposal for the reclassification of Clostridium hiranonis within the genus Peptacetobacter.

    abstract::A novel, Gram-stain-positive, rod-shaped, non-motile, non-spore-forming, obligately anaerobic bacterium, designated strain ZHW00191T, was isolated from human faeces and characterized by using a polyphasic taxonomic approach. Growth occurred at 25-45 °C (optimum, 37-42 °C), at pH 5.5-10.0 (optimum, pH 6.5-7.0) and with...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003925

    authors: Chen XJ,Wang ZQ,Zhou ZY,Zeng NY,Huang QF,Wang ZW,Tang WL,Zhou HW

    更新日期:2020-05-01 00:00:00

  • Description of Patulibacter americanus sp. nov., isolated from biological soil crusts, emended description of the genus Patulibacter Takahashi et al. 2006 and proposal of Solirubrobacterales ord. nov. and Thermoleophilales ord. nov.

    abstract::Two bacterial strains, CP153-3 and CP177-2T, were isolated from biological soil crusts on the Colorado Plateau, USA, and assigned to the genus Patulibacter, according to 16S rRNA gene sequence analysis and phenotypic characteristics. The strains were Gram-positive, aerobic and psychrotolerant and showed positive catal...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64185-0

    authors: Reddy GS,Garcia-Pichel F

    更新日期:2009-01-01 00:00:00

  • Description of Conyzicola nivalis sp. nov., isolated from glacial snow, and emended description of the genus Conyzicola and Conyzicola lurida.

    abstract::A cold-tolerant, translucent, yellow-pigmented, Gram-stain-positive, non-motile, rod-shaped bacteria was isolated from snow of the Zadang Glacier on the Tibetan Plateau, PR China. 16S rRNA gene sequence similarity analysis indicated that the isolate was closely related to Conyzicola lurida KCTC 29231T and Leifsonia ps...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002027

    authors: Gu Z,Liu Y,Xu B,Wang N,Shen L,Liu H,Zhou Y,Xing T,Guo B,Liu X

    更新日期:2017-08-01 00:00:00

  • Legionella septentrionalis sp. nov., isolated from aquatic environments in the northern PR China.

    abstract::Four strains (km711T, km714, km542 and km524), representing a novel Legionella species, were isolated from aquatic environments in northern PR China. Cells were Gram-stain-negative, rod-shaped, microaerobic, motile and growth depended on l-cysteine. They grew at 25‒42 °C (optimum, 35‒37 °C) and could tolerate up to 1....

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004592

    authors: Li LH,Zhang L,Wu HY,Qu PH,Chen JC,Zhan XY,Zhu QY,Chen C,Hu CH

    更新日期:2021-01-01 00:00:00

  • Marinicauda salina sp. nov., isolated from a marine solar saltern.

    abstract::A novel Gram-stain-negative, aerobic, oxidase-positive, motile, dimorphic rod bacterium, with a polar flagellum or a polar prostheca, designated as strain WD6-1T, was isolated from a sediment sample collected from a marine solar saltern located in Weihai, PR China. Growth of strain WD6-1T was observed at 15-45 °C (opt...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003441

    authors: Zhai TJ,Liu BT,Zhu RQ,Chen GJ,Du ZJ

    更新日期:2019-08-01 00:00:00

  • Vitellibacter nionensis sp. nov., isolated from a shallow water hydrothermal vent.

    abstract::A novel, Gram-stain-negative, non-motile, rod-shaped yellow bacterium, designated VBW088(T) was isolated from a shallow water hydrothermal vent in Espalamaca in the Azores. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain VBW088(T) clustered with three type strains of species of the genus Vite...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.070805-0

    authors: Rajasabapathy R,Mohandass C,Yoon JH,Dastager SG,Liu Q,Khieu TN,Son CK,Li WJ,Colaço A

    更新日期:2015-02-01 00:00:00

  • Polyphasic characterization of rhizobia that nodulate Phaseolus vulgaris in West Africa (Senegal and Gambia).

    abstract::Fifty-eight new isolates were obtained from root nodules of common bean (Phaseolus vulgaris) cultivated in soils originating from different agroecological areas in Senegal and Gambia (West Africa). A polyphasic approach including both phenotypic and genotypic techniques was used to study the diversity of the 58 Rhizob...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-1-159

    authors: Diouf A,de Lajudie P,Neyra M,Kersters K,Gillis M,Martinez-Romero E,Gueye M

    更新日期:2000-01-01 00:00:00

  • Desulfosoma caldarium gen. nov., sp. nov., a thermophilic sulfate-reducing bacterium from a terrestrial hot spring.

    abstract::A thermophilic, sulfate-reducing bacterium, designated strain USBA-053(T), was isolated from a terrestrial hot spring located at a height of 2500 m in the Colombian Andes (5° 45' 33.29″ N 73° 6' 49.89″ W), Colombia. Cells of strain USBA-053(T) were oval- to rod-shaped, Gram-negative and motile by means of a single pol...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.020586-0

    authors: Baena S,Perdomo N,Carvajal C,Díaz C,Patel BKC

    更新日期:2011-04-01 00:00:00

  • Phylogenetic relationships amongst tetrahymenine ciliates inferred by a comparison of telomerase RNAs.

    abstract::The phylogenetic relationships between ciliate species in the suborder Tetrahymenina, order Hymenostomata, was investigated by comparing their telomerase RNA (TER) sequences. This relatively small RNA is an integral part of telomerase, the ribonucleoprotein enzyme that catalyses the synthesis of telomeric DNA. Despite...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-6-2297

    authors: Ye AJ,Romero DP

    更新日期:2002-11-01 00:00:00

  • Defluviimonas aestuarii sp. nov., a marine bacterium isolated from a tidal flat, and emended description of the genus Defluviimonas Foesel et al. 2011.

    abstract::A novel Gram-staining-negative, strictly aerobic bacterium, designated BS14(T), was isolated from a marine tidal flat of the South Sea in Korea. Colonies were opaque, white, smooth and circular on marine agar. Cells were moderately halophilic, non-motile rods showing catalase- and oxidase-positive reactions. Growth of...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.048389-0

    authors: Math RK,Jin HM,Jeong SH,Jeon CO

    更新日期:2013-08-01 00:00:00

  • Arcticibacter pallidicorallinus sp. nov. isolated from glacier ice.

    abstract::A Gram-stain-negative, rod-shaped bacterium (strain Hh36(T)) was isolated from the No. 1 glacier in Xinjiang, north-west China. Colonies of strain Hh36(T) were pink, convex and round on PYG medium plates. Strain Hh36(T) was able to grow at 4-30 °C and pH 6.0-8.0. Phylogenetic analysis based on 16S rRNA gene sequences ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.061754-0

    authors: Liu Q,Kim SG,Liu HC,Xin YH,Zhou YG

    更新日期:2014-07-01 00:00:00

  • Yersinia aleksiciae sp. nov.

    abstract::Yersinia kristensenii consists of phenotypically heterogeneous strains. This is reflected by the existence of strains with various multilocus enzyme electrophoresis and 16S rRNA gene sequence types. Strains originally phenotyped as members of Y. kristensenii were studied using 16S rRNA gene sequencing, DNA-DNA hybridi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63220-0

    authors: Sprague LD,Neubauer H

    更新日期:2005-03-01 00:00:00

  • Candida olivae sp. nov., a novel yeast species from 'Greek-style' black olive fermentation.

    abstract::Two yeast strains (FMCC Y-1(T) and FMCC Y-2) were recovered during a survey of the yeast biota associated with fermenting black olives, collected from an olive tree (Olea europaea L. cv. 'Conservolea') orchard in Central Greece. Phylogenetic analysis based on rRNA gene sequences (18S, 26S, and 5.8S-ITS) indicated that...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.012955-0

    authors: Nisiotou AA,Panagou EZ,Nychas GE

    更新日期:2010-05-01 00:00:00

  • Pseudomonas lactis sp. nov. and Pseudomonas paralactis sp. nov., isolated from bovine raw milk.

    abstract::Five strains, designated WS 4672T, WS 4998, WS 4992T, WS 4997 and WS 5000, isolated from bovine raw milk formed two individual groups in a phylogenetic analysis. The most similar species on the basis of 16S rRNA gene sequences were Pseudomonas azotoformans IAM 1603T, Pseudomonas gessardii CIP 105469T and Pseudomonas l...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001836

    authors: von Neubeck M,Huptas C,Glück C,Krewinkel M,Stoeckel M,Stressler T,Fischer L,Hinrichs J,Scherer S,Wenning M

    更新日期:2017-06-01 00:00:00

  • Chryseobacterium arothri Campbell et al. 2008 is a later heterotypic synonym of Chryseobacterium hominis Vaneechoutte et al. 2007.

    abstract::The type strains of the species Chryseobacterium arothri (DSM 19326(T)) and Chryseobacterium hominis (NF802(T)) were compared in order to clarify the taxonomic relationship of the two species. The 16S rRNA gene sequences of the two strains shared 99.9 % identity. DNA-DNA pairing studies between the two strains showed ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.004093-0

    authors: Kämpfer P,Vaneechoutte M,Wauters G

    更新日期:2009-04-01 00:00:00

  • Sphingomonas crocodyli sp. nov., isolated from a crocodile pond.

    abstract::Strain CCP-7T, isolated from a freshwater pond in Taiwan, was characterized using a polyphasic taxonomy approach. Phylogenetic analyses based on 16S rRNA gene sequences and coding sequences of 92 protein clusters indicated that strain CCP-7T formed a phylogenetic lineage in the genus Sphingomonas. Strain CCP-7T was mo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003455

    authors: Sheu SY,Xie YR,Kwon SW,Sheu C,Chen WM

    更新日期:2019-07-01 00:00:00

  • Terrilactibacillus tamarindi sp. nov., isolated from bark of Tamarindus indica.

    abstract::A Gram-stain-positive, catalase-positive, facultatively anaerobic, terminal-spore-forming rod, designated strain BCM23-1T, was isolated from bark of Tamarindus indica collected from Chiang Mai Province, Thailand. This strain produced d-lactic acid from glucose. It grew at 20-45 °C (optimum, 30 °C), pH 3.5-9 (optimum, ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004261

    authors: Kingkaew E,Nuhwa R,Piluk J,Thitiprasert S,Thongchul N,Tanasupawat S

    更新日期:2020-07-01 00:00:00

  • Cnuibacter physcomitrellae gen. nov., sp. nov., a novel member of the family Microbacteriaceae isolated from the moss of Physcomitrella patens.

    abstract::A Gram-stain-positive, strictly aerobic and rod-shaped bacterium, designated strain XAT, was isolated from the moss, Physcomitrella patens, and characterized by using a polyphasic taxonomic approach. The novel strain was non-spore-forming, non-motile, catalase-positive and oxidase-negative. Its optimal temperature for...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000775

    authors: Zhou X,Nan Guo G,Qi Wang L,Lan Bai S,Hong Li Y

    更新日期:2016-02-01 00:00:00

  • Detection and identification of a novel 16SrXIII subgroup phytoplasma associated with strawberry red leaf disease in Argentina.

    abstract::Strawberry red leaf phytoplasma was found in strawberry plants from production fields in Lules (Tucumán province) and Bella Vista (Corrientes province), Argentina. Characteristic strawberry red leaf symptoms were stunting, young leaves with yellowing at the edges, mature leaves which curled and were reddish at the aba...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000276

    authors: Fernández FD,Meneguzzi NG,Guzmán FA,Kirschbaum DS,Conci VC,Nome CF,Conci LR

    更新日期:2015-08-01 00:00:00