New approach to phylogenetic analysis of the genus Bifidobacterium based on partial HSP60 gene sequences.

abstract：:Four rhizobia-like strains, isolated from root nodules of Pisum sativum and Vicia faba grown in Anhui and Jiangxi Provinces of China, were grouped into the genus Rhizobium but were distinct from all recognized species of the genus Rhizobium by phylogenetic analysis of 16S rRNA and housekeeping genes. The combined sequ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang YJ,Zheng WT,Everall I,Young JPW,Zhang XX,Tian CF,Sui XH,Wang ET,Chen WX

更新日期：2015-09-01 00:00:00

abstract：:A strain of a novel non-chromogenic mycobacterium was isolated from synovial tissue from a 68-year-old female with bursitis of her right elbow. The slowly growing strain had a unique PCR-restriction enzyme analysis (PRA) profile of the hsp65 gene and 16S rRNA gene sequence in comparison with other mycobacterium specie...

journal_title：International journal of systematic and evolutionary microbiology

authors： Turenne C,Chedore P,Wolfe J,Jamieson F,Broukhanski G,May K,Kabani A

更新日期：2002-11-01 00:00:00

abstract：:A bacterial strain, designated KMM 6049T, was isolated from the sea urchin Strongylocentrotus intermedius inhabiting the Sea of Japan. The bacterium studied was strictly aerobic, heterotrophic, yellow-pigmented, non-motile, Gram-negative and oxidase-, catalase-, beta-galactosidase- and alkaline phosphatase-positive. 1...

journal_title：International journal of systematic and evolutionary microbiology

authors： Nedashkovskaya OI,Kim SB,Lysenko AM,Mikhailov VV,Bae KS,Kim IS

更新日期：2005-01-01 00:00:00

abstract：:Three short spore chain-forming actinomycete strains were isolated from soil samples collected from subtropical islands in Japan. The cell-wall peptidoglycan of these strains contained meso-diaminopimelic acid (meso-A(2)pm), glutamic acid and alanine. The major isoprenoid quinone was MK-9(H(4)), iso-C(16 : 0) and 2-OH...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tamura T,Ishida Y,Otoguro M,Suzuki KI

更新日期：2010-11-01 00:00:00

abstract：:We have used amplified fragment length polymorphism (AFLP), multilocus sequence analysis (MLSA) and DNA-DNA hybridization for genotypic classification of Xanthomonas pathovars associated with the plant family Anacardiaceae. AFLP and MLSA results showed congruent phylogenetic relationships of the pathovar mangiferaeind...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ah-You N,Gagnevin L,Grimont PA,Brisse S,Nesme X,Chiroleu F,Bui Thi Ngoc L,Jouen E,Lefeuvre P,Vernière C,Pruvost O

更新日期：2009-02-01 00:00:00

abstract：:A novel actinomycete strain, designed MW4-36(T), was isolated from tropical forest soil in Nakhon Sawan Province, Thailand. Morphological and chemotaxonomic characteristics of this strain clearly demonstrated that it belongs to the genus Dactylosporangium. The strain formed finger-shaped sporangia on short sporangioph...

journal_title：International journal of systematic and evolutionary microbiology

authors： Thawai C,Suriyachadkun C

更新日期：2013-11-01 00:00:00

abstract：:In the course of an on-going study aimed at cataloguing the natural yeast biodiversity found in Ecuador, two strains (CLQCA 13-025 and CLQCA 20-004(T)) were isolated from samples of cow manure and rotten wood collected in two separate provinces of the country (Orellana and Bolívar). These strains were found to represe...

journal_title：International journal of systematic and evolutionary microbiology

authors： James SA,Carvajal Barriga EJ,Barahona PP,Cross K,Bond CJ,Roberts IN

更新日期：2013-01-01 00:00:00

abstract：:A novel bacterial strain designated CB4(T) was isolated from soil from the Hallasan, Jeju, Korea. Strain CB4(T) was found to be strictly aerobic, Gram-stain-positive, rod-shaped, motile and formed creamy greyish colonies on nutrient agar. The major fatty acids were identified as iso-C(15:0) and iso-C(16:0), and the pr...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee KC,Kim KK,Eom MK,Kim JS,Kim DS,Ko SH,Lee JS

更新日期：2014-11-01 00:00:00

abstract：:A Gram-positive bacterium, designated CMU-AB225T, was isolated from rhizosphere soil of an oil palm (Elaeis guineensis). The strain exhibited a blue aerial spore mass and a light cream to moderate yellow substrate mycelium and formed chains of spiny spores. Whole-cell hydrolysates consisted of ll-diaminopimelic acid, ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sujarit K,Kudo T,Ohkuma M,Pathom-Aree W,Lumyong S

更新日期：2018-10-01 00:00:00

abstract：:A Gram-staining-negative, rod-shaped, facultatively anaerobic, non-motile and pale-red-pigmented bacterium, designated SAORIC-476T, was isolated from deep-sea water from the Pacific Ocean. 16S rRNA gene sequence analyses showed that strain SAORIC-476T was most closely related to Rubrivirga marinaSAORIC-28T (96.8 % sim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Song J,Joung Y,Park S,Cho JC,Kogure K

更新日期：2016-09-01 00:00:00

abstract：:Two Gram-positive or Gram-variable, endospore-forming, moderately halophilic rods (strains TF-11(T) and TF-12(T)) were isolated from a tidal flat of the Yellow Sea in Korea and were subjected to a polyphasic taxonomic study. Strains TF-11(T) and TF-12(T) had cell-wall peptidoglycan based on meso-diaminopimelic acid. T...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Kim IG,Kang KH,Oh TK,Park YH

更新日期：2003-09-01 00:00:00

abstract：:An alphaproteobacterium, strain Dia-1(T), was isolated from algae-dominated biofilms on stones from the littoral zone of Lake Constance, Germany. This bacterium was isolated after initial enrichment in spent medium obtained after growth of a diatom culture. Numerous sugars and some organic acids and alcohols served as...

journal_title：International journal of systematic and evolutionary microbiology

authors： Rahalkar M,Bahulikar RA,Deutzmann JS,Kroth PG,Schink B

更新日期：2012-08-01 00:00:00

abstract：:A polyphasic approach was used to characterize a bacterium, GPTSA 11(T), isolated from a warm spring located in a reserve forest in Assam, India. The cells are Gram-variable, strictly aerobic, sporulating motile rods. The major fatty acids of the strain are C(15 : 0) anteiso (48.42 %), C(16 : 0) iso (11.59 %), C(16 : ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Saha P,Mondal AK,Mayilraj S,Krishnamurthi S,Bhattacharya A,Chakrabarti T

更新日期：2005-11-01 00:00:00

abstract：:A Gram-stain-negative, aerobic bacterium, designated strain GYP-11T, was isolated from the culture broth of a marine microalga, Picochloruma sp. 122. Cells were dimorphic rods; free living cells were motile by means of a single polar flagellum, and star-shaped-aggregate-forming cells were attached with stalks and non-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang G,Tang M,Wu H,Dai S,Li T,Chen C,He H,Fan J,Xiang W,Li X

更新日期：2016-01-01 00:00:00

abstract：:Strain HAL40b(T) was isolated from the marine sponge Haliclona sp. 1 collected at the Sula Ridge off the Norwegian coast and characterized by physiological, biochemical and phylogenetic analyses. The isolate was a small rod with a polar flagellum. It was aerobic, Gram-negative and oxidase- and catalase-positive. Optim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Graeber I,Kaesler I,Borchert MS,Dieckmann R,Pape T,Lurz R,Nielsen P,von Döhren H,Michaelis W,Szewzyk U

更新日期：2008-03-01 00:00:00

abstract：:A Gram-stain-negative, aerobic coccus, designated CK1056T, was isolated from coastal sediment of Xiaoshi Island, Weihai, PR China. Strain CK1056T was found to grow at 15-37 °C (optimum, 30 °C), with 0.5-6.5 % (w/v) NaCl (optimum, 3.5 %) and displayed alkaliphilic growth within the pH range of pH 6.5-10.0 (optimum, pH ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Feng X,Zou QH,Zhang XY,Ye MQ,Du ZJ

更新日期：2020-11-01 00:00:00

abstract：:An anthracycline-producing actinomycete (strain SF2303) was compared with two other anthracycline producers, Actinomadura carminata IFO 15903T and Nonomuraea roseoviolacea IFO 14098T, using morphological, physiological, chemotaxonomic and molecular-genetic criteria. The morphological and cultural characteristics of th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gyobu Y,Miyadoh S

更新日期：2001-05-01 00:00:00

abstract：:A Gram-stain-positive, aerobic actinobacterium, designated strain CBS5P-1T, was isolated from bark of Excoecaria agallocha Linn collected from Guangxi Zhuang Autonomous Region, PR China. Cells were short rods. Colonies were light yellow, circular and had entire margins. Strain CBS5P-1T grew at 10-37 °C (optimum, 30 °C...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen MS,Li F,Yan XR,Tuo L

更新日期：2020-12-01 00:00:00

abstract：:A Gram-reaction-positive, facultatively anaerobic, non-spore-forming and catalase-negative rod-shaped bacterial strain, designated IWT126(T), was isolated from orchardgrass (Dactylis glomerata L.) silage preserved in Hachimantai, Iwate, Japan. The isolate showed growth at 15-45 °C, pH 3.5-7.5 and with 4.0 % (w/v) NaCl...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tohno M,Kitahara M,Irisawa T,Masuda T,Uegaki R,Ohkuma M,Tajima K

更新日期：2013-12-01 00:00:00

abstract：:Two Gram-stain-negative, catalase- and oxidase-positive, facultative anaerobic and rod-shaped motile bacteria, designated strains BEI176T and BEI207T, were isolated from seawater collected in the East China Sea. Phylogenetic analysis based on 16S rRNA gene sequences showed that strains BEI176T and BEI207T belonged to ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li B,Li Y,Liu R,Xue C,Zhu X,Tian X,Wang X,Liang J,Zheng Y,Zhang XH

更新日期：2020-01-01 00:00:00

abstract：:A Gram-stain-negative, non-spore-forming, aerobic, motile, ovoid or short rod shaped bacterium, designed strain B17T, was isolated from the culture broth of Picochlorum sp. 122. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain B17T forms a stable cluster with Oceanicolagranulosus MCCC 1A105...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang G,Xu S,Su H,Chen B,Liang J,Huang W,Wang Y,Yu K

更新日期：2019-02-01 00:00:00

abstract：:A Gram-stain-negative, strictly aerobic, rod-shaped bacterium, designated V18T, was isolated from a deep-sea sediment sample collected from the Pacific Ocean and subjected to a polyphasic taxonomic investigation. Cells of strain V18T grew in medium containing 0-10.0 % (w/v) NaCl (optimum 1.0 %), at pH 5.5-9.0 (optimum...

journal_title：International journal of systematic and evolutionary microbiology

authors： Fang C,Wu YH,Sun C,Wang H,Cheng H,Meng FX,Wang CS,Xu XW

更新日期：2019-01-01 00:00:00

abstract：:The taxonomic status of four strains from several mineral water sources in Taejon, Korea, was examined. The DNA base compositions of these strains ranged from 62 to 66 mol %. All of the strains contained sphingolipids and ubiquinone 10 as the main respiratory quinone. The cellular fatty acids of these strains included...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee JS,Shin YK,Yoon JH,Takeuchi M,Pyun YR,Park YH

更新日期：2001-07-01 00:00:00

abstract：:A novel Gram-stain-negative, rod-shaped, gliding bacterium, designated strain 001-Na2T, was isolated from coastal sediment of the Yellow Sea in Sindu-ri, Republic of Korea. Cells were aerobic, oxidase-positive and catalase-positive. Colonies were dark salmon-coloured, circular, and pulvinate with entire margins. 16S r...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee DW,Lee AH,Lee H,Kim JJ,Khim JS,Yim UH,Kim BS

更新日期：2017-09-01 00:00:00

abstract：:A pink-pigmented, aerobic, facultatively methylotrophic bacterium, strain BJ001T, was isolated from internal poplar tissues (Populus deltoidesxnigra DN34) and identified as a member of the genus Methylobacterium. Phylogenetic analyses showed that strain BJ001T is related to Methylobacterium thiocyanatum, Methylobacter...

journal_title：International journal of systematic and evolutionary microbiology

authors： Van Aken B,Peres CM,Doty SL,Yoon JM,Schnoor JL

更新日期：2004-07-01 00:00:00

abstract：:An obligately anaerobic and equol-producing bacterium, designated strain do03T, was isolated from the caecal content of a rat. Cells were Gram-positive, non-spore-forming rods. The results from a phylogenetic analysis based on 16S rRNA gene sequences showed that strain do03T formed a separate line of descent in the ph...

journal_title：International journal of systematic and evolutionary microbiology

authors： Minamida K,Ota K,Nishimukai M,Tanaka M,Abe A,Sone T,Tomita F,Hara H,Asano K

更新日期：2008-05-01 00:00:00

abstract：:Strain KYPY10T, isolated from a water sample taken from the Funglin Stream in Taiwan, was characterized using a polyphasic taxonomic approach. Cells of strain KYPY10T were Gram-stain-negative, strictly aerobic, motile by gliding, rod-shaped surrounded by a thick capsule, and formed light-yellow colonies. Growth occurr...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sheu SY,Su CL,Kwon SW,Chen WM

更新日期：2017-12-01 00:00:00

abstract：:Two novel Gram-stain-negative strains (CCBAU 03422(T) and CCBAU 03415) isolated from root nodules of Sophora flavescens were classified phylogenetically into the genus Phyllobacterium based on the comparative analysis of 16S rRNA and atpD genes. They showed 99.8 % rRNA gene sequence similarities to Phyllobacterium bra...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jiao YS,Yan H,Ji ZJ,Liu YH,Sui XH,Zhang XX,Wang ET,Chen WX,Chen WF

更新日期：2015-02-01 00:00:00

abstract：:Six yeast strains isolated from olive oil sediments and spoiled olive oils originating from Slovenia and Portugal, respectively, proved to represent an undescribed yeast species based on DNA sequence comparisons. The analysis of gene sequences for internal transcribed spacer regions and the large subunit rRNA gene D1/...

journal_title：International journal of systematic and evolutionary microbiology

authors： Čadež N,Dlauchy D,Tóbiás A,Péter G

更新日期：2017-11-01 00:00:00

abstract：:An unknown gram-positive, catalase-positive, strictly aerobic, rod-shaped bacterium was isolated from the nasal cavities of two common seals. Chemical analysis revealed the presence in the bacterium of a hitherto unknown cell-wall murein [type: L-Lys-L-Ala2-Gly(2-3)-L-Ala (Gly)]. Comparative 16S rRNA gene sequencing s...

journal_title：International journal of systematic and evolutionary microbiology

authors： Collins MD,Hoyles L,Foster G,Falsen E,Weiss N

更新日期：2002-03-01 00:00:00