Multigene characterization of a new 'Candidatus Phytoplasma rubi'-related strain associated with blackberry witches' broom.

abstract：:A Gram-negative, heterotrophic, marine bacterium, designated strain TT1T, was isolated from seawater collected from the shallow coastal region of Anping Harbour, Tainan, Taiwan. Cells grown in broth cultures were straight rods that were motile by means of a single polar flagellum. The isolate required NaCl for growth ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dar Jean W,Huang SP,Chen JS,Shieh WY

更新日期：2016-02-01 00:00:00

abstract：:A Gram-stain-negative, facultative anaerobic, red-coloured, rod-shaped, non-flagellated, non-motile and non-gliding bacterium, designated strain Z0201T, was isolated from lake water in Yunnan, China (26° 16' N, 99° 94' E). Cells of strain Z0201T were 0.2-0.4 µm wide and 1.4-2.5 µm long, catalase-positive and oxidase-n...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang XT,Wang XM,Zheng WS,Zhang XK,Du ZJ

更新日期：2019-07-01 00:00:00

abstract：:Two novel strains, J116-2T and J116-1, were isolated from forest soil and were taxonomically characterized by a polyphasic approach. Both strains were yellow-coloured, Gram-stain-negative, strictly aerobic, non-motile and rod-shaped bacteria. The strains were non-sporulating, catalase-positive and oxidase-negative. St...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chaudhary DK,Dahal RH,Kim J

更新日期：2018-02-01 00:00:00

abstract：:A Gram-stain-positive, non-motile actinomycete, designated strain YIM 48875(T), was isolated from rhizosphere soil of Bletilla striata and its taxonomic position was established by using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequence data showed that strain YIM 48875(T) belonged to the ge...

journal_title：International journal of systematic and evolutionary microbiology

authors： Cao YR,Wang Q,Jin RX,Jiang Y,Lai HX,He WX,Xu LH,Jiang CL

更新日期：2011-06-01 00:00:00

abstract：:A Gram-reaction-negative, non-motile, yellow-pigmented, NaCl-requiring bacterial strain, designated LPB0003T, was isolated from a marine gastropod, the granulated dogwhelk (Thais luteostoma). The complete genome sequence of strain LPB0003T (GenBank accession number CP017477), sized 3.81 Mb, had 3296 protein-coding gen...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim E,Shin SK,Choi S,Yi H

更新日期：2017-01-01 00:00:00

abstract：:A rod-shaped, Gram-staining-negative, strictly aerobic, non-motile bacterium with no flexirubin-type pigment, designated as W201ET, was isolated from an intertidal sandy beach in Antarctica. The organism formed faintly yellow, round colonies on marine agar 2216E. The strain required sea salts for growth and grew optim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ren Q,Yu M,Li Y,Zhang Y,Shi X,Wu Y,Su Y,Wang Y,Wang X,Zhang XH

更新日期：2018-03-01 00:00:00

abstract：:Two bacterial isolates from Kuwaiti soil contaminated by crude oil were analysed by using a polyphasic taxonomic approach. The isolates, designated OFN N11 and OFN N12(T), were shown to have molecular, chemical and morphological properties typical of members of the genus Nocardia. Based on a multigenic approach that i...

journal_title：International journal of systematic and evolutionary microbiology

authors： Rodríguez-Nava V,Khan ZU,Pötter G,Kroppenstedt RM,Boiron P,Laurent F

更新日期：2007-07-01 00:00:00

abstract：:Two bacterial strains, R2A1-13(T) and R2A45-3(T), were isolated from greenhouse soils in Korea. The cells of both strains were Gram-negative, aerobic and rod-shaped. 16S rRNA gene sequence analysis placed the isolates in the genus Flavobacterium within the family Flavobacteriaceae. Strain R2A1-13(T) was found to be re...

journal_title：International journal of systematic and evolutionary microbiology

authors： Weon HY,Song MH,Son JA,Kim BY,Kwon SW,Go SJ,Stackebrandt E

更新日期：2007-07-01 00:00:00

abstract：:A Gram-stain-negative, rod-shaped, non-motile and red-pink-pigmented bacterial strain, designated B1909T, was isolated from an ice core drilled from Muztagh Glacier on the Tibetan Plateau, China. A phylogenetic tree based on 16S rRNA gene sequences showed that strain B1909T formed a lineage within the genus Hymenobact...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu K,Liu Y,Wang N,Gu Z,Shen L,Xu B,Zhou Y,Liu H,Jiao N

更新日期：2016-10-01 00:00:00

abstract：:Three actinobacterial strains, CR30(T), CR36 and CR38(T), were isolated from rhizosphere soil of Pisum sativum plants collected in Spain. The strains were filamentous, Gram-stain-positive and produced single spores. Phylogenetic, chemotaxonomic and morphological analyses confirmed that the three strains belonged to th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Carro L,Pukall R,Spröer C,Kroppenstedt RM,Trujillo ME

更新日期：2012-12-01 00:00:00

abstract：:Flavobacteria are emerging as an important group of organisms associated with the degradation of complex organic matter in aquatic environments. A novel Gram-reaction-negative, heterotrophic, rod-shaped, aerobic, yellow-pigmented and gliding bacterium, strain SCB36T, was isolated from a protein-enriched seawater sampl...

journal_title：International journal of systematic and evolutionary microbiology

authors： Pinhassi J,Nedashkovskaya OI,Hagström A,Vancanneyt M

更新日期：2009-09-01 00:00:00

abstract：:A Gram-stain-positive, facultatively anaerobic, endospore-forming bacterium, designated strain TD8T, was isolated from surface-sterilized rice seeds (Oryza sativa L.). Phylogenetic analysis of the 16S rRNA gene indicated that strain TD8T should be placed within the genus Gracilibacillus (95.2-99.0 % sequence similarit...

journal_title：International journal of systematic and evolutionary microbiology

authors： He SW,Wang X,Guo HB,Han JG,Thin KK,Gao JS,Ma LA,Zhang XX

更新日期：2020-10-01 00:00:00

abstract：:The Bacteriological Code deals with the nomenclature of prokaryotes. This may include existing names (the Approved Lists of Bacterial Names) as well as new names and new combinations. In this sense the Code is also dealing indirectly with taxonomic opinions. However, as with most codes of nomenclature there are no mec...

journal_title：International journal of systematic and evolutionary microbiology

authors：

更新日期：2007-07-01 00:00:00

abstract：:Two Gram-stain-negative, oxidase-negative, catalase-positive, aerobic and coccus-shaped bacterial strains, KSY3-6T and JSH6-18, were isolated from soil in South Korea. Strains KSY3-6T and JSH6-18 showed high resistance to gamma-ray and UVC irradiation. The 16S rRNA gene sequences of strains KSY3-6T and JSH6-18 showed ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jeon SH,Kang MS,Joo ES,Kim EB,Lim S,Jeong SW,Jung HY,Srinivasan S,Kim MK

更新日期：2016-12-01 00:00:00

abstract：:A bacterial strain designated L2-7T, phylogenetically related to Eubacterium hallii DSM 3353T, was previously isolated from infant faeces. The complete genome of strain L2-7T contains eight copies of the 16S rRNA gene with only 98.0-98.5 % similarity to the 16S rRNA gene of the previously described type strain E. hall...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shetty SA,Zuffa S,Bui TPN,Aalvink S,Smidt H,De Vos WM

更新日期：2018-12-01 00:00:00

abstract：:Two Gram-positive bacterial strains, CM2104(T) and CM2110, isolated from the inner part of abnormally spoiled oriental melon (Cucumis melo) in Korea, were subjected to a polyphasic taxonomic study. The cell-wall peptidoglycan of strains CM2104(T) and CM2110 contained meso-diaminopimelic acid as the diagnostic diamino ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Lee HB,Yeo SH,Choi JE

更新日期：2004-11-01 00:00:00

abstract：:Previous studies have demonstrated that cellular fatty acid analysis is a useful tool for identifying unknown strains of rhizobia and establishing taxonomic relationships between the species. In this study, the fatty acid profiles of over 600 strains belonging to the genera Agrobacterium, Bradyrhizobium, Mesorhizobium...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tighe SW,de Lajudie P,Dipietro K,Lindström K,Nick G,Jarvis BD

更新日期：2000-03-01 00:00:00

abstract：:A novel filamentous bacterium, strain SCSIO 10219(T), was isolated from a sediment sample collected from the South China Sea (113° 3.752' E 18° 1.722' N) at a depth of 2105 m. Growth was observed at 25-35 °C (optimum 30 °C) and pH 5.0-8.0 (optimum pH 6.0-7.0). The organism formed yellow-white colonies with radial wrin...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li J,Zhang GT,Yang J,Tian XP,Wang FZ,Zhang CS,Zhang S,Li WJ

更新日期：2012-06-01 00:00:00

abstract：:A gram-negative, non-spore-forming, non-flagellated, motile-by-gliding rod, designated SSK2-3(T), was isolated from the junction between seawater and a freshwater spring at Jeju island, South Korea. Strain SSK2-3(T) grew optimally at 25-30 °C, at pH 7.0-7.5 and in the presence of 2 % (w/v) NaCl. Phylogenetic analysis ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jung YT,Yoon JH

更新日期：2013-04-01 00:00:00

abstract：:Nine strains of haloalkaliphilic, obligately autotrophic, sulfur-oxidizing bacteria able to grow with thiocyanate (SCN-) as the sole energy and nitrogen source were isolated from soda lakes in South-East Siberia, Kenya and Egypt after enrichment on sodium carbonate minerals buffered at pH 10 with thiocyanate as the su...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sorokin DY,Tourova TP,Lysenko AM,Mityushina LL,Kuenen JG

更新日期：2002-03-01 00:00:00

abstract：:A Gram-staining-negative, rod-shaped, facultatively anaerobic, non-motile and pale-red-pigmented bacterium, designated SAORIC-476T, was isolated from deep-sea water from the Pacific Ocean. 16S rRNA gene sequence analyses showed that strain SAORIC-476T was most closely related to Rubrivirga marinaSAORIC-28T (96.8 % sim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Song J,Joung Y,Park S,Cho JC,Kogure K

更新日期：2016-09-01 00:00:00

abstract：:A novel cellobiose-degrading and lactate-producing bacterium, strain Cavy grass 6T, was isolated from faecal samples of guinea pigs (Cavia porcellus). Cells of the strain were ovalshaped, non-motile, non-spore-forming, Gram-stain-positive and facultatively anaerobic. The strain gr at 25-40 °C (optimum 37 °C) and pH 4....

journal_title：International journal of systematic and evolutionary microbiology

authors： Palakawong Na Ayudthaya S,Hilderink LJ,Oost JV,Vos WM,Plugge CM

更新日期：2017-05-01 00:00:00

abstract：:A Gram-stain-negative, aerobic bacterium, designated strain GYP-11T, was isolated from the culture broth of a marine microalga, Picochloruma sp. 122. Cells were dimorphic rods; free living cells were motile by means of a single polar flagellum, and star-shaped-aggregate-forming cells were attached with stalks and non-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang G,Tang M,Wu H,Dai S,Li T,Chen C,He H,Fan J,Xiang W,Li X

更新日期：2016-01-01 00:00:00

abstract：:A mesophilic, obligately anaerobic, lactate-, alcohol-, carbohydrate- and amino-acid- degrading bacterium, designated strain 7WAY-8-7(T), was isolated from an upflow anaerobic sludge blanket reactor treating high-strength organic wastewater from isomerized sugar production processes. Cells of strain 7WAY-8-7(T) were m...

journal_title：International journal of systematic and evolutionary microbiology

authors： Qiu YL,Hanada S,Kamagata Y,Guo RB,Sekiguchi Y

更新日期：2014-06-01 00:00:00

abstract：:A Gram-negative-staining, short-rod-shaped, floc-forming bacterium, designated strain RB3-7(T), was isolated from a laboratory-scale activated sludge system treating coke plant effluent. Comparative analysis of the 16S rRNA gene sequence demonstrated that the novel isolate was distantly related (≤ 95.8 % similarity) t...

journal_title：International journal of systematic and evolutionary microbiology

authors： Felföldi T,Kéki Z,Sipos R,Márialigeti K,Tindall BJ,Schumann P,Tóth EM

更新日期：2011-09-01 00:00:00

abstract：:A Gram-stain-positive, aerobic, motile, rod-shaped, endospore-forming bacterium, designated strain R55T, was isolated from the liverwort Herbertus sendtneri growing at Gawalong glacier, Tibet, and characterized by using a polyphasic taxonomic approach. The major fatty acids of strain R55T were anteiso-C15 : 0, C16 : 0...

journal_title：International journal of systematic and evolutionary microbiology

authors： Guo GN,Zhou X,Chen ZL,Yang ZW,Li XD,Li YH

更新日期：2016-02-01 00:00:00

abstract：:Thirteen novel, obligately anaerobic, thermoacidophilic bacteria were isolated from deep-sea hydrothermal vent sites. Four of the strains, designated EP5-r(T), KM1, Mar08-272r(T) and Mar08-368r, were selected for metabolic and physiological characterization. With the exception of strain EP5-r(T), all strains were shor...

journal_title：International journal of systematic and evolutionary microbiology

authors： Flores GE,Hunter RC,Liu Y,Mets A,Schouten S,Reysenbach AL

更新日期：2012-06-01 00:00:00

abstract：:Based upon the results of another publication [P. Schumann et al. (2000). Int J Syst Evol Microbiol 50, 1421-1424) it is concluded that the culture Pelczaria aurantia ATCC 49321T (= DSM 12801T) currently being distributed does not conform to the description of the type strain of Pelczaria aurantia (Poston 1994) and th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tindall BJ,Schumann P,Stackebrandt E

更新日期：2000-07-01 00:00:00

abstract：:Rejection (nomen rejiciendum) of the name Borreliella and all new combinations therein is being requested on grounds of risk to human health and patient safety (Principle 1, subprinciple 2 and Rule 56a) and violation to aim for stability of names, to avoid useless creation of names (Principle 1, subprinciple 1 and 3) ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Margos G,Castillo-Ramirez S,Cutler S,Dessau RB,Eikeland R,Estrada-Peña A,Gofton A,Graña-Miraglia L,Hunfeld KP,Krause A,Lienhard R,Lindgren PE,Oskam C,Rudolf I,Schwartz I,Sing A,Stevenson B,Wormser GP,Fingerle V

更新日期：2020-05-01 00:00:00

abstract：:Unikaryotic enteromonads and diplokaryotic diplomonads have been regarded as closely related protozoan groups. It has been proposed that diplomonads originated within enteromonads in a single event of karyomastigont duplication. This paper presents the first study to address these questions using molecular phylogeneti...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kolisko M,Cepicka I,Hampl V,Kulda J,Flegr J

更新日期：2005-07-01 00:00:00