Helcococcus sueciensis sp. nov., isolated from a human wound.

Abstract:

:A previously undescribed, Gram-positive, catalase-negative, coccus-shaped organism that originated from a human wound was subjected to taxonomic study. On the basis of its cellular morphology and the results of biochemical testing, the unknown organism was identified tentatively as a member of the genus Helcococcus, but it did not correspond to either of the two recognized species of this genus. Comparative 16S rRNA gene sequencing studies confirmed that the bacterium was associated phylogenetically with the genus Helcococcus, with the unidentified organism forming a hitherto unknown subline within the genus. On the basis of biochemical, molecular chemical and molecular phylogenetic evidence, it is proposed that the unknown organism that was recovered from a human wound should be classified as a novel species of the genus Helcococcus, namely Helcococcus sueciensis sp. nov. The type strain is CCUG 47334T (= CIP 108183T).

authors

Collins MD,Falsen E,Brownlee K,Lawson PA

doi

10.1099/ijs.0.63077-0

keywords:

subject

Has Abstract

pub_date

2004-09-01 00:00:00

pages

1557-1560

issue

Pt 5

eissn

1466-5026

issn

1466-5034

journal_volume

54

pub_type

杂志文章
  • Sphingomonas ginsengisoli sp. nov. and Sphingomonas sediminicola sp. nov.

    abstract::Two novel bacteria, designated strains Gsoil 634(T) and Dae 20(T), were isolated in South Korea from soil of a ginseng field and freshwater sediment, respectively and were characterized by a polyphasic approach to clarify their taxonomic positions. Phylogenetic analysis based on 16S rRNA gene sequences indicated that,...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.039578-0

    authors: An DS,Liu QM,Lee HG,Jung MS,Kim SC,Lee ST,Im WT

    更新日期:2013-02-01 00:00:00

  • Mesorhizobium ephedrae sp. nov. isolated from the roots of Ephedra przewalskii in Kumtag desert.

    abstract::Strain 6GN-30T, a Gram-stain-negative, aerobic, non-spore-forming, rod-shaped, motile bacterium was isolated from Ephedra sinica roots in the Kumtag Desert. On the basis of the 16S rRNA gene sequence, the isolate represented a member of the genus Mesorhizobium of the family Phyllobacteriaceae. The results of a phyloge...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003044

    authors: Liu L,Liang LX,Zhang XX,Li LB,Sun QW

    更新日期:2018-11-01 00:00:00

  • Paraflavitalea devenefica sp. nov., isolated from urban soil.

    abstract::A Gram-stain-negative, rod-shaped, mesophilic, milky white-pigmented, aerobic, non-spore-forming and non-flagellated bacterium, designated strain X16T, was isolated from urban soil of Zibo, Shandong, China. According to 16S rRNA gene sequence analysis, the isolate showed highest similarities with Paraflavitalea soli 5...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004587

    authors: Hou X,Liu H,Shang Y,Mao S,Li S,Sang F,Deng H,Wang L,Kong L,Zhang C,Ding Z,Gao Y,Wei S,Chen Z

    更新日期:2021-01-01 00:00:00

  • Robinsoniella peoriensis gen. nov., sp. nov., isolated from a swine-manure storage pit and a human clinical source.

    abstract::A polyphasic taxonomic study was performed on six strains of an unknown Gram-positive, non-motile, spore-forming, short oval to rod-shaped bacterium isolated from a swine-manure storage pit. In addition to these strains, an isolate deposited in the Culture Collection of the University of Göteborg (Sweden) was found to...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65676-0

    authors: Cotta MA,Whitehead TR,Falsen E,Moore E,Lawson PA

    更新日期:2009-01-01 00:00:00

  • Ruminococcus champanellensis sp. nov., a cellulose-degrading bacterium from human gut microbiota.

    abstract::A strictly anaerobic, cellulolytic strain, designated 18P13(T), was isolated from a human faecal sample. Cells were Gram-positive non-motile cocci. Strain 18P13(T) was able to degrade microcrystalline cellulose but the utilization of soluble sugars was restricted to cellobiose. Acetate and succinate were the major end...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.027375-0

    authors: Chassard C,Delmas E,Robert C,Lawson PA,Bernalier-Donadille A

    更新日期:2012-01-01 00:00:00

  • Brachybacterium hainanense sp. nov., isolated from noni (Morinda citrifolia L.) branch.

    abstract::A Gram-stain-positive bacterial strain, designated as NR2T, isolated from noni (Morinda citrifolia L.) branch was investigated using a polyphasic taxonomic approach. The cells were small coccoid to ovoid, non-spore-forming and motile. Phylogenetic analysis based on 16S rRNA gene sequences showed that the strain was a ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000559

    authors: Liu Y,Zhai L,Yao S,Cao Y,Cao Y,Zhang X,Su J,Ge Y,Zhao R,Cheng C

    更新日期:2015-11-01 00:00:00

  • Thermus arciformis sp. nov., a thermophilic species from a geothermal area.

    abstract::Two aerobic, Gram-negative, non-motile, non-sporulating, yellow-pigmented bacteria, strains TH92(T) and TH91, were isolated from a hot spring located in Laibin, Guangxi, in the south-eastern geothermal area of China. The isolates grew at 40-77 degrees C (optimally at 70 degrees C) and at pH 6.0-9.5 (optimally at pH 7....

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.007690-0

    authors: Zhang XQ,Ying Y,Ye Y,Xu XW,Zhu XF,Wu M

    更新日期:2010-04-01 00:00:00

  • Metallosphaera cuprina sp. nov., an acidothermophilic, metal-mobilizing archaeon.

    abstract::A novel acidothermophilic archaeon, strain Ar-4(T), was isolated from a sulfuric hot spring in Tengchong, Yunnan, China. Cells of strain Ar-4(T) were Gram-staining-negative, irregular cocci and motile by means of flagella. Strain Ar-4(T) grew over a temperature range of 55-75 °C (optimum, 65 °C), a pH range of 2.5-5.5...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.026591-0

    authors: Liu LJ,You XY,Guo X,Liu SJ,Jiang CY

    更新日期:2011-10-01 00:00:00

  • Candidimonas bauzanensis sp. nov., isolated from soil, and emended description of the genus Candidimonas Vaz-Moreira et al. 2011.

    abstract::A Gram-negative, facultatively anaerobic, psychrophilic, motile rod, designated BZ59(T), was isolated from hydrocarbon-contaminated soil. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain BZ59(T) belonged to the genus Candidimonas and had highest 16S rRNA gene sequence similarity with Candidimo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.036400-0

    authors: Zhang DC,Busse HJ,Wieser C,Liu HC,Zhou YG,Schinner F,Margesin R

    更新日期:2012-09-01 00:00:00

  • Sulfitobacter sabulilitoris sp. nov., isolated from marine sand.

    abstract::A Gram-stain-negative, aerobic, non-motile and ovoid or rod-shaped bacterial strain, HSMS-29T, was isolated from a marine sand sample collected from the Yellow Sea, Republic of Korea. The neighbour-joining phylogenetic tree of 16S rRNA gene sequences showed that strain HSMS-29T fell within the clade comprising the typ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003614

    authors: Park S,Kim IK,Lee JS,Yoon JH

    更新日期:2019-10-01 00:00:00

  • Thauera butanivorans sp. nov., a C2-C9 alkane-oxidizing bacterium previously referred to as 'Pseudomonas butanovora'.

    abstract::The placement of 'Pseudomonas butanovora' in the genus Thauera was proposed previously, based on 16S rRNA gene sequence analysis, upon further studies of taxonomical characteristics. In this study, physiological characteristics and DNA-DNA reassociation data are presented and the transfer of 'P. butanovora' to the gen...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000638-0

    authors: Dubbels BL,Sayavedra-Soto LA,Bottomley PJ,Arp DJ

    更新日期:2009-07-01 00:00:00

  • Rhodococcus qingshengii sp. nov., a carbendazim-degrading bacterium.

    abstract::A Gram-positive, aerobic, non-motile, mesophilic strain, djl-6(T), able to degrade carbendazim, was isolated from a carbendazim-contaminated soil sample from Jiangsu province, China. The taxonomic position of this isolate was analysed by using a polyphasic approach. Chemotaxonomic analysis including peptidoglycan type...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65095-0

    authors: Xu JL,He J,Wang ZC,Wang K,Li WJ,Tang SK,Li SP

    更新日期:2007-12-01 00:00:00

  • 16S-23S rDNA spacer of Pectinatus, Selenomonas and Zymophilus reveal new phylogenetic relationships between these genera.

    abstract::The 16S-23S rDNA spacer regions of two Pectinatus species, two Zymophilus species and one Selenomonas species were cloned after PCR amplification. The results of PCR amplification showed that these species had two types of spacer regions which differ in molecular size (long and short). Only the long spacer regions in ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-2-883

    authors: Motoyama Y,Ogata T

    更新日期:2000-03-01 00:00:00

  • Chryseobacterium gregarium sp. nov., isolated from decaying plant material.

    abstract::In this study, strain P 461/12T, isolated from decaying plant material after mulching a pasture, was shown to represent a novel species of the genus Chryseobacterium by means of a polyphasic approach. The closest phylogenetic neighbours to the novel strain, as determined by 16S rRNA gene sequence analysis, were Chryse...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65544-0

    authors: Behrendt U,Ulrich A,Schumann P

    更新日期:2008-05-01 00:00:00

  • Dietzia alimentaria sp. nov., isolated from a traditional Korean food.

    abstract::An actinobacterial strain, designated 72(T), was isolated from a traditional salt-fermented seafood in Korea. Colonies were coral red and cells were Gram-reaction-positive, non-motile rods. Strain 72(T) grew with 0-10 % (w/v) NaCl, at pH 7-10 and at 15-37 °C. Optimum growth conditions were 2 % NaCl, pH 7.0 and 30 °C. ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.021501-0

    authors: Kim J,Roh SW,Choi JH,Jung MJ,Nam YD,Kim MS,Park EJ,Shin KS,Bae JW

    更新日期:2011-09-01 00:00:00

  • Algibacter lectus gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from green algae.

    abstract::Three strains of the marine, gliding, pigmented, facultatively anaerobic, heterotrophic, Gram-negative bacteria were isolated from the green algae Acrosiphonia sonderi (Kütz) Kornm and Ulva fenestrata Ruprecht inhabiting the Sea of Japan. 16S rDNA sequence analysis indicated that the strains were members of the family...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02949-0

    authors: Nedashkovskaya OI,Kim SB,Han SK,Rhee MS,Lysenko AM,Rohde M,Zhukova NV,Frolova GM,Mikhailov VV,Bae KS

    更新日期:2004-07-01 00:00:00

  • Cohnella xylanilytica sp. nov. and Cohnella terrae sp. nov., xylanolytic bacteria from soil.

    abstract::Two xylan-degrading bacteria, strains MX15-2(T) and MX21-2(T), were isolated from soils collected in Nan province, Thailand. Cells were Gram-reaction-positive, facultatively anaerobic, spore-forming and rod-shaped. They contained meso-diaminopimelic acid in the cell-wall peptidoglycan. The major menaquinone was MK-7. ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.017855-0

    authors: Khianngam S,Tanasupawat S,Akaracharanya A,Kim KK,Lee KC,Lee JS

    更新日期:2010-12-01 00:00:00

  • List of new names and new combinations previously effectively, but not validly, published.

    abstract::The purpose of this announcement is to effect the valid publication of the following effectively published new names and new combinations under the procedure described in the Bacteriological Code (1990 Revision). Authors and other individuals wishing to have new names and/or combinations included in future lists shoul...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.024562-0

    authors:

    更新日期:2010-05-01 00:00:00

  • An unusual Streptococcus from human urine, Streptococcus urinalis sp. nov.

    abstract::Biochemical, molecular chemical and molecular genetic studies were performed on an unknown Gram-positive, catalase-negative, chain-forming coccus isolated from the urine of a patient suffering from cystitis. Comparative 16S rRNA gene sequencing showed that the organism is a member of the 'pyogenic subgroup' of the gen...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-3-1173

    authors: Collins MD,Hutson RA,Falsen E,Nikolaitchouk N,LaClaire L,Facklam RR

    更新日期:2000-05-01 00:00:00

  • Marinoscillum gen. nov., a member of the family 'Flexibacteraceae', with Marinoscillum pacificum sp. nov. from a marine sponge and Marinoscillum furvescens nom. rev., comb. nov.

    abstract::A novel strain, designated MRN461(T), was isolated from a marine sponge in Micronesia. The 16S rRNA gene sequence of the isolate showed 95.6 % similarity with that of 'Microscilla furvescens' IFO (now NBRC) 15994. Phylogenetic analysis revealed that the isolate and 'Microscilla furvescens' IFO 15994 formed a distinct ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.004317-0

    authors: Seo HS,Kwon KK,Yang SH,Lee HS,Bae SS,Lee JH,Kim SJ

    更新日期:2009-05-01 00:00:00

  • Rothia endophytica sp. nov., an actinobacterium isolated from Dysophylla stellata (Lour.) Benth.

    abstract::A novel endophytic actinobacterium, designated strain YIM 67072(T), was isolated from healthy roots of Dysophylla stellata (Lour.) Benth. Cells of this aerobic, cream-yellow-coloured strain occurred singly, in pairs or in tetrads, were Gram-stain-positive and ovoid- to spherical-shaped. Strain YIM 67072(T) grew at 4-4...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.052522-0

    authors: Xiong ZJ,Zhang JL,Zhang DF,Zhou ZL,Liu MJ,Zhu WY,Zhao LX,Xu LH,Li WJ

    更新日期:2013-11-01 00:00:00

  • Mycoplasma iguanae sp. nov., from a green iguana (Iguana iguana) with vertebral disease.

    abstract::Strain 2327T, first cultured from vertebral abscesses of green iguanas (Iguana iguana) collected in Florida, USA, was readily distinguished from all previously described mollicutes by 16S rRNA gene sequence comparisons. Strain 2327T lacks a cell wall, ferments glucose, does not hydrolyse arginine, aesculin or urea and...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63852-0

    authors: Brown DR,Demcovitz DL,Plourdé DR,Potter SM,Hunt ME,Jones RD,Rotstein DS

    更新日期:2006-04-01 00:00:00

  • Cecembia calidifontis sp. nov., isolated from a hot spring runoff, and emended description of the genus Cecembia.

    abstract::Two red-pigmented isolates, designated RQ-33(T) and TU-13, were recovered from hot spring runoffs on the Island of São Miguel in the Azores, Portugal. These organisms have an optimum growth temperature of approximately 45 °C and an optimum pH for growth between 7.5 and 8.5. Based on 16S rRNA gene sequence analysis, th...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.044537-0

    authors: Albuquerque L,Tiago I,Nobre MF,Veríssimo A,da Costa MS

    更新日期:2013-04-01 00:00:00

  • Aquimonas voraii gen. nov., sp. nov., a novel gammaproteobacterium isolated from a warm spring of Assam, India.

    abstract::A bacterial strain designated GPTSA 20(T), which was isolated from a warm spring in Assam, India, was characterized by using a polyphasic approach. The cells were Gram-negative, aerobic rods, which could not utilize or produce acid from most of the carbohydrates tested. The predominant fatty acids were C(15:0) iso (25...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63552-0

    authors: Saha P,Krishnamurthi S,Mayilraj S,Prasad GS,Bora TC,Chakrabarti T

    更新日期:2005-07-01 00:00:00

  • Nocardia rhizosphaerihabitans sp. nov., a novel actinomycete isolated from a coastal soil.

    abstract::An actinomycete strain, designated KLBMP S0039T, was isolated from the rhizosphere soil of Lycium Linn., collected from the coastal region in Lianyungang, Jiangsu Province, eastern PR China, and was studied to determine its taxonomic position. The isolate showed a combination of morphological and chemotaxonomic proper...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002481

    authors: Ding P,Bai JL,Wang TT,Sun Y,Cao CL,Jiang JH,Qin S

    更新日期:2018-01-01 00:00:00

  • Sphingoaurantiacus capsulatus sp. nov., isolated from mountain soil, and emended description of the genus Sphingoaurantiacus.

    abstract::A novel Gram-stain-negative, strictly aerobic, non-motile, rod-shaped, capsule-forming bacterium, designated strain YLT33T, that formed orange-red colonies was isolated from mountain cliff soil from Enshi Grand Canyon, southwest China. Growth occurred at 4-35 °C (optimum 28 °C) and at pH 6.0-10.0 (optimum 7.0). It sho...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001447

    authors: Tan Y,Wang Y,Wang D,Wang G,Zheng S

    更新日期:2016-12-01 00:00:00

  • Evaluation of the phylogenetic position of the sulfate-reducing bacterium Thermodesulfovibrio yellowstonii (phylum Nitrospirae) by means of gene order data from completely sequenced genomes.

    abstract::The phylogenetic placement of Thermodesulfovibrio yellowstonii was investigated on the basis of gene order data from completely sequenced bacterial genomes. T. yellowstonii was found to share four gene arrangements characteristic of the Proteobacteria, Aquificae, Planctomycetes, Spirochaetes, Bacteroidetes, Chlorobi, ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.014266-0

    authors: Kunisawa T

    更新日期:2010-05-01 00:00:00

  • Spongiibacter marinus gen. nov., sp. nov., a halophilic marine bacterium isolated from the boreal sponge Haliclona sp. 1.

    abstract::Strain HAL40b(T) was isolated from the marine sponge Haliclona sp. 1 collected at the Sula Ridge off the Norwegian coast and characterized by physiological, biochemical and phylogenetic analyses. The isolate was a small rod with a polar flagellum. It was aerobic, Gram-negative and oxidase- and catalase-positive. Optim...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65438-0

    authors: Graeber I,Kaesler I,Borchert MS,Dieckmann R,Pape T,Lurz R,Nielsen P,von Döhren H,Michaelis W,Szewzyk U

    更新日期:2008-03-01 00:00:00

  • Acetobacter oeni sp. nov., isolated from spoiled red wine.

    abstract::A bacterial strain, designated B13T, was isolated from spoiled red wine from the Dão region, Portugal. The strain was Gram-negative, strictly aerobic, rod-shaped and motile. Phylogenetic analysis on the basis of 16S rRNA gene sequences indicated that B13T belonged to the genus Acetobacter within the Alphaproteobacteri...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.46000-0

    authors: Silva LR,Cleenwerck I,Rivas R,Swings J,Trujillo ME,Willems A,Velázquez E

    更新日期:2006-01-01 00:00:00

  • Nesterenkonia suensis sp. nov., a haloalkaliphilic actinobacterium isolated from a salt pan.

    abstract::A Gram-positive, non-motile, non-spore-forming actinobacterium designated strain Sua-BAC020(T) was isolated from brine from Sua salt pan in Botswana. The strain was alkaliphilic and moderately halophilic, displaying optimal growth at 35-37 °C, pH 9 and 2.5 % (w/v) NaCl. Comparative 16S rRNA gene sequence analysis show...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.035006-0

    authors: Govender L,Naidoo L,Setati ME

    更新日期:2013-01-01 00:00:00