Methylothermus subterraneus sp. nov., a moderately thermophilic methanotroph isolated from a terrestrial subsurface hot aquifer.

abstract：:A Gram-stain-negative, non-spore-forming, non-motile, irregularly circular, aerobic/microaerobic appendaged bacterium (strain 120-1(T)) was isolated from Naga-ike, one of the freshwater lakes in the Skarvsnes ice-free area of Antarctica. Strain 120-1(T) grew between 5 and 35 °C, with optimum growth at 30 °C. The pH ra...

journal_title：International journal of systematic and evolutionary microbiology

authors： Fukuda W,Yamada K,Miyoshi Y,Okuno H,Atomi H,Imanaka T

更新日期：2012-08-01 00:00:00

abstract：:Four obligately anaerobic, thermophilic, sulfate-reducing bacterial strains, designated TGE-P1(T), TDV(T), TGL-LS1 and TSL-P1, were isolated from thermophilic (operated at 55 degrees C) methanogenic sludges from waste and wastewater treatment. The optimum temperature for growth of all the strains was in the range 55-6...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sekiguchi Y,Muramatsu M,Imachi H,Narihiro T,Ohashi A,Harada H,Hanada S,Kamagata Y

更新日期：2008-11-01 00:00:00

abstract：:A Gram-stain-negative, aerobic, non-motile, rod-shaped bacterial strain, designated CAU 1488T, was isolated from tidal flat sediment, and its taxonomic position was investigated using a polyphasic approach. The organism grew optimally at a temperature of 30 °C, at pH 7.0-7.5 and in the presence of 0-6 % (w/v) NaCl. Ph...

journal_title：International journal of systematic and evolutionary microbiology

authors： Baek J,Kim JH,Sukhoom A,Kim W

更新日期：2020-05-01 00:00:00

abstract：:Results of previous multilocus sequence and whole-genome-based analyses have suggested that a homogeneous group of isolates belonging to the genus Tenacibaculum, represented by strain TNO020T and associated with skin ulcer development in sea-farmed fish, represents an as-yet-undescribed species. Comparative whole-geno...

journal_title：International journal of systematic and evolutionary microbiology

authors： Olsen AB,Spilsberg B,Nilsen HK,Lagesen K,Gulla S,Avendaño-Herrera R,Irgang R,Duchaud E,Colquhoun DJ

更新日期：2020-12-01 00:00:00

abstract：:A facultatively anaerobic, prosthecate bacterium, strain Mfc52(T), was isolated from a microbial fuel cell inoculated with soil and fed with cellulose as the sole fuel. Cells were Gram-negative, non-spore-forming, straight or slightly curved rods, and some of them had one or two polar prosthecae (stalks). Cells reprod...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kodama Y,Watanabe K

更新日期：2011-08-01 00:00:00

abstract：:A novel Gram-stain-negative, motile and rod-shaped bacterium, designated xg18T, was isolated from Lake XuguoCo on the Tibetan Plateau. The strain was able to grow optimally at 0-2 % NaCl and tolerate up to 6 % NaCl. Growth occurred at pH 7.0-11.0 (optimum, pH 9.0-10.0) and 15-40 °C (optimum, 37 °C). Vitamins were not ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Phurbu D,Pema Y,Ma C,Lu H,Li H,Tian Y,Xing P

更新日期：2019-01-01 00:00:00

abstract：:A Gram-stain-positive, rod-shaped, endospore-forming, aerobic bacterium (FJAT-14571(T)) was isolated from a soil sample in Taiwan. Strain FJAT-14571(T) grew at 20-40 °C (optimum 35 °C), pH 6-10 (optimum pH 8) and 0-2% (w/v) NaCl (optimum 0%). Phylogenetic analyses based on 16S rRNA gene sequences showed that strain FJ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu B,Liu GH,Sengonca C,Schumann P,Wang MK,Xiao RF,Zheng XF,Chen Z

更新日期：2015-07-01 00:00:00

abstract：:A Gram-stain-positive, motile, rod-shaped bacterial strain, YN-1T, was isolated from a rice field in the town of Jietou, Yunnan Province, PR China. Colonies were circular, 1-2 mm in diameter, creamy white, with slightly irregular margins. The isolate grew optimally at 37 °C, pH 7.0 and with 1.0 % (w/v) NaCl. On the ba...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ding MJ,Shang NJ,Xiao ZX,Shao F,Liu L,Huang Y,Zhou LK,Zhou JH,Zhang Y

更新日期：2019-04-01 00:00:00

abstract：:A Gram-negative, non-motile, filamentous, rod-shaped, non-spore-forming bacterium (strain F2(T)) was isolated from the surface of an electricity-harvesting electrode incubated in marine sediments. Strain F2(T) does not contain c-type cytochromes, flexirubin or carotenoids. It is a facultative anaerobe that can ferment...

journal_title：International journal of systematic and evolutionary microbiology

authors： Holmes DE,Nevin KP,Woodard TL,Peacock AD,Lovley DR

更新日期：2007-04-01 00:00:00

abstract：:Two novel actinobacteria, designated strains Gsoil 097T and Gsoil 818T, isolated from soil of a ginseng field, South Korea, were characterized by a polyphasic approach to clarify their taxonomic positions. They were Gram-reaction-positive, aerobic, non-spore-forming and rod-shaped. Phylogenetic analysis based on 16S r...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee HY,Liu Q,Kang MS,Kim SK,Lee SY,Im WT

更新日期：2016-05-01 00:00:00

abstract：:A yellow-coloured bacterial strain, designated BP-5(T), was isolated from a water sample of a cold spring located in the Hsinchu area of northern Taiwan. Cells of the strain were Gram-negative, non-spore-forming rods with a polar flagellum. The isolate was able to grow at 15-42 degrees C, 0-1 % NaCl and pH 6-8. The pr...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lin MC,Chou JH,Arun AB,Young CC,Chen WM

更新日期：2008-10-01 00:00:00

abstract：:The genus Clostridium belongs to the family Clostridiaceae. However, many species with the genus name Clostridium are found in different families and even crossing into a different phylum. Motivated by recently completed genome sequences, we propose the reclassification of two separate clades that include misclassifie...

journal_title：International journal of systematic and evolutionary microbiology

authors： Haas KN,Blanchard JL

更新日期：2020-01-01 00:00:00

abstract：:A Gram-stain-negative, non-motile and coccoid, ovoid or rod-shaped bacterial strain, designated P-MA1-7(T), was isolated from a sea squirt (Halocynthia roretzi) collected from the South Sea, Korea. Strain P-MA1-7(T) grew optimally at 25 °C, at pH 7.0-8.0 and in the presence of 2-3% (w/v) NaCl. Phylogenetic analyses ba...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim YO,Park S,Nam BH,Jung YT,Kim DG,Lee JS,Lee SJ,Yoon JH

更新日期：2013-09-01 00:00:00

abstract：:A novel bacterial strain MVW-23T was isolated from a freshwater spring in Taiwan. The strain was Gram-staining-negative, strictly aerobic, motile by gliding, rod-shaped and formed translucent yellow colonies. Optimal growth occurred at 20-30 °C, pH 7.0, and in the presence of 0.5-1 % NaCl. Phylogenetic analyses based ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen WM,Su CL,Sheu SY

更新日期：2017-11-01 00:00:00

abstract：:The taxonomic position of Sphingobacterium antarcticum has been revised by means of 16S rRNA gene sequences, DNA-DNA hybridization, and phenotypic and chemotaxonomic characteristics. All data previously reported, as well as the results of the present phylogenetic analysis, support that Sphingobacterium antarcticum is ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Farfán M,Montes MJ,Marqués AM

更新日期：2014-03-01 00:00:00

abstract：:A polyphasic taxonomic approach was applied to strains of the species Staphylococcus vitulinus and Staphylococcus pulvereri in order to clarify their taxonomic relatedness. Four reference strains, representing both species, and seven strains isolated from human clinical material were characterized by biotyping, riboty...

journal_title：International journal of systematic and evolutionary microbiology

authors： Švec P,Vancanneyt M,Sedláček I,Engelbeen K,Štětina V,Swings J,Petráš P

更新日期：2004-11-01 00:00:00

abstract：:A Gram-stain-negative, flagellated, aerobic and rod-shaped or ovoid bacterial strain, designated HJTF-7(T), was isolated from a tidal flat on the South Sea of South Korea, and its taxonomic position was investigated using a polyphasic approach. Strain HJTF-7(T) grew optimally at 25 °C, at pH 7.0-8.0 and in the presenc...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park S,Park JM,Kang CH,Yoon JH

更新日期：2015-01-01 00:00:00

abstract：:A Gram-stain-positive, aerobic, non-motile, rod-shaped bacterium, strain 0704C9-2(T), was isolated from hydrothermal sediment of the Indian Ocean. The organism grew with 0-5% (w/v) NaCl and at 10-37 °C, with optimal growth occurring with 1% NaCl and at 28-30 °C. Comparative 16S rRNA gene sequence analysis revealed tha...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang Y,Ren H,Zhang G

更新日期：2014-10-01 00:00:00

abstract：:A Gram-stain-positive, obligately anaerobic, short rod, designated strain HHRM1715(T), was isolated from the blood of a patient with Fournier's gangrene, complicated by sepsis. On the basis of 16S rRNA gene sequence analysis, strain HHRM1715(T) was shown to belong to the genus Atopobium and was most closely related to...

journal_title：International journal of systematic and evolutionary microbiology

authors： Cools P,Oyaert M,Vaneechoutte M,De Laere E,Vervaeke S

更新日期：2014-09-01 00:00:00

abstract：:A Gram-positive, facultatively anaerobic, motile, spore-forming bacterium, designated Gsoil 1411T, was isolated from soil of a ginseng field in Pocheon Province (South Korea) and was characterized using a polyphasic approach. Comparative analysis of 16S rRNA gene sequences revealed that strain Gsoil 1411T belongs to t...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ten LN,Baek SH,Im WT,Lee M,Oh HW,Lee ST

更新日期：2006-11-01 00:00:00

abstract：:A yeast, strain NCYC 2938T, was isolated from contaminated industrial material. This material was involved in a cascade continuous process for oxidizing sorbitol (D-glucitol) to L-sorbose. The isolate is similar, although not identical, to Candida geochares and Candida magnoliae in its physiological characteristics. S...

journal_title：International journal of systematic and evolutionary microbiology

authors： James SA,Bond CJ,Roberts IN

更新日期：2001-05-01 00:00:00

abstract：:We isolated a strain coded Esc2Am(T) during a study focused on the microbial diversity of adult specimens of the bark beetle Hylesinus fraxini. Its 16S rRNA gene sequence had 99.4% similarity with respect to its closest relative, Pseudomonas rhizosphaerae IH5(T). The analysis of partial sequences of the housekeeping g...

journal_title：International journal of systematic and evolutionary microbiology

authors： Menéndez E,Ramírez-Bahena MH,Fabryová A,Igual JM,Benada O,Mateos PF,Peix A,Kolařík M,García-Fraile P

更新日期：2015-09-01 00:00:00

abstract：:Phenotypic and phylogenetic studies were performed on six unidentified, Gram-positive, catalase-negative, chain-forming Streptococcus-like organisms recovered from grey seals. Biochemically the six strains were highly related to each other, but they did not appear to correspond to any recognized species of the genus S...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lawson PA,Foster G,Falsen E,Davison N,Collins MD

更新日期：2004-09-01 00:00:00

abstract：:Two Gram-negative, motile, aerobic bacterial strains, designated B2(T) and 1_C16_27(T), were respectively isolated from a seawater sample collected from the East China Sea and a semi-coke sample from north-eastern Estonia. Their genetic, phenotypic and chemotaxonomic properties were studied. The isolates were short ro...

journal_title：International journal of systematic and evolutionary microbiology

authors： Xu XW,Huo YY,Wang CS,Oren A,Cui HL,Vedler E,Wu M

更新日期：2011-08-01 00:00:00

abstract：:Two halophilic archaea, strains EN-2(T) and SH-4, were isolated from the saline lakes Erliannor and Shangmatala, respectively, in Inner Mongolia, China. Cells were strictly aerobic, motile rods. Colonies were red. Strains EN-2(T) and SH-4 were able to grow at 25-50 °C (optimum 35-40 °C), with 2.5-5.0 M NaCl (optimum 3...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gutiérrez MC,Castillo AM,Corral P,Kamekura M,Ventosa A

更新日期：2011-05-01 00:00:00

abstract：:Among a group of marine isolates that were found to be positive for genes of the bacterial photosynthetic reaction centre, a strain was selected for characterization that was phylogenetically close to the genus Roseovarius. The strain, designated DFL-24T, originated from a culture of Alexandrium ostenfeldii (dinoflage...

journal_title：International journal of systematic and evolutionary microbiology

authors： Biebl H,Allgaier M,Lünsdorf H,Pukall R,Tindall BJ,Wagner-Döbler I

更新日期：2005-11-01 00:00:00

abstract：:A novel strain, NJ-8(T), was isolated from sediment of the eutrophic Taihu Lake (China) and was subjected to a taxonomic study by using a polyphasic approach. The novel strain was aerobic and formed orange-pigmented colonies on R2A agar. Cells were Gram-negative single rods that were motile by means of gliding. Phylog...

journal_title：International journal of systematic and evolutionary microbiology

authors： Qu JH,Yuan HL,Yang JS,Li HF,Chen N

更新日期：2009-05-01 00:00:00

abstract：:The nucleotide sequences of the genes of 16S rRNAs were determined for the type strain Oscillochloris trichoides DG-6T and three new strains of Oscillochloris-like mesophilic filamentous green bacteria. Two major clusters have been found within the family Chloroflexaceae by phylogenetic-analysis: one cluster includes ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Keppen OI,Tourova TP,Kuznetsov BB,Ivanovsky RN,Gorlenko VM

更新日期：2000-07-01 00:00:00

abstract：:A novel halophilic, filamentous actinomycete strain, designated AFM 10258T, was isolated from a sediment sample collected from the Dead Sea of Israel. The isolate grew with 10-35 % NaCl and did not grow without NaCl. The isolate formed white aerial mycelium and long spore chains, and two spores were separated by steri...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lai H,Jiang Y,Chen X,Li Q,Jiang C,Jiang Y,Wei X

更新日期：2017-05-01 00:00:00

abstract：:A taxonomic study was carried out on a Gram-stain-negative bacterium, namely strain ANRC-JH13T, isolated from a sediment sample collected at Jasper beach, adjacent to Fildes Peninsula, Antarctica. Cells of strain ANRC-JH13T were non-spore-forming rods and motile by the way of flagellum. Strain ANRC-JH13T was facultati...

journal_title：International journal of systematic and evolutionary microbiology

authors： Han X,Zhang J,Zhang Y,Liu J,Fang W,Fang Z,Xiao Y

更新日期：2019-06-01 00:00:00