Lacibacter cauensis gen. nov., sp. nov., a novel member of the phylum Bacteroidetes isolated from sediment of a eutrophic lake.

abstract：:Strain KIT 00200-70066-1(T) was isolated from the sputum of a patient with pulmonary disease. Cells of the strain were Gram-variable, facultatively anaerobic, motile, spore-forming rods and formed colourless to white colonies on tryptic soy agar at 30 °C and pH 7. The pathogenicity of the strain is not k...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim KK,Lee KC,Yu H,Ryoo S,Park Y,Lee JS

更新日期：2010-10-01 00:00:00

abstract：:Culture-based study of the faecal microbiome in two adult female subjects revealed the presence of two obligately anaerobic, non-spore-forming, rod-shaped, non-motile, Gram-negative bacterial strains that represent novel species. The first strain, designated 627T, was a fastidious, slow-growing, indole-positive bacter...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shkoporov AN,Chaplin AV,Khokhlova EV,Shcherbakova VA,Motuzova OV,Bozhenko VK,Kafarskaia LI,Efimov BA

更新日期：2015-12-01 00:00:00

abstract：:Three pink-pigmented, facultatively methylotrophic strains, designated MP1, MP2 and MR(T), were isolated from seawater from southern China and characterized. Analysis of their complete 16S rRNA gene sequences revealed that they constituted three separate phylogenetic groups, showing the highest levels of similarity wi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang X,Sahr F,Xue T,Sun B

更新日期：2007-08-01 00:00:00

abstract：:The present study was aimed at reducing the time and labour used to perform DNA-DNA hybridizations for classification of bacteria at the species level. A micro-well-format DNA hybridization method was developed and validated. DNA extractions were performed by a small-scale method and DNA was sheared mechanically into ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Christensen H,Angen O,Mutters R,Olsen JE,Bisgaard M

更新日期：2000-05-01 00:00:00

abstract：:Thirteen strains of a novel spore-forming, Gram-positive, mesophilic heterotrophic bacterium were isolated from spacecraft surfaces (Mars Odyssey Orbiter) and assembly-facility surfaces at the Jet Propulsion Laboratory in California and the Kennedy Space Center in Florida. Phylogenetic analysis of 16S rRNA gene sequen...

journal_title：International journal of systematic and evolutionary microbiology

authors： Satomi M,La Duc MT,Venkateswaran K

更新日期：2006-08-01 00:00:00

abstract：:A high-G+C-content, Gram-positive bacterium, strain D10(T), was isolated from the root of Oroxylum indicum, a Chinese medicinal plant. Based on 16S rRNA gene sequence analysis, strain D10(T) was a member of the genus Pseudonocardia and was most closely related, albeit loosely, to Pseudonocardia halophobica. Morphologi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gu Q,Luo H,Zheng W,Liu Z,Huang Y

更新日期：2006-09-01 00:00:00

abstract：:A novel methane-oxidizing bacterium, strain IT-9(T), was isolated from a shallow submarine hydrothermal system occurring in a coral reef in Japan. Strain IT-9(T) was a Gram-negative, aerobic, motile, coccoid or oval-shaped bacterium with the distinctive intracytoplasmic membrane arrangement of a type I methanotroph. S...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hirayama H,Abe M,Miyazaki M,Nunoura T,Furushima Y,Yamamoto H,Takai K

更新日期：2014-03-01 00:00:00

abstract：:A mesophilic hydrogenotrophic methanogen, strain MHT-1T, was isolated from the leachate of a sea-based site for solid waste disposal (the port of Osaka, Japan). Strain MHT-1T was found to be an irregular coccus and was able to use H2/CO2 and formate as energy sources. Acetate was required for growth. The optimum tempe...

journal_title：International journal of systematic and evolutionary microbiology

authors： Mori K,Yamamoto H,Kamagata Y,Hatsu M,Takamizawa K

更新日期：2000-09-01 00:00:00

abstract：:The genus Thiomicrorhabdus (Tmr) in the Piskirickettsiaceae in the Thiotrichales of the Gammaproteobacteria contains four species of sulfur-oxidising obligate chemolithoautotroph with validly published names, all previously classified as Thiomicrospira (Tms) species. Here we demonstrate that Thiomicrospira hydrogeniph...

journal_title：International journal of systematic and evolutionary microbiology

authors： Boden R,Scott KM,Rae AW,Hutt LP

更新日期：2017-10-01 00:00:00

abstract：:Strain AH-1T, a Gram-negative, aerobic, non-spore-forming, motile, rod-shaped bacterium, was isolated from tetrabromobisphenol A-contaminated soil in China. The taxonomic position was investigated using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain AH-1T was a membe...

journal_title：International journal of systematic and evolutionary microbiology

authors： Mu Y,Jia WB,Ke Z,Zhuang W,Wang HM,Jiang JD,Chen K,Chen Q

更新日期：2018-08-01 00:00:00

abstract：:A strictly anaerobic, Gram-stain-negative, non-spore-forming, non-motile, non-pigmented bacterium, strain J115T, was isolated from human faeces. Cells of strain J115T were straight rods, generally 1.8-3.0 µm, but could be up to 18 µm long. Growth occurred below 2 % (w/v) NaCl and 2 % (v/v) bile. Strain J115T produced ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Le Roy T,Van der Smissen P,Paquot A,Delzenne N,Muccioli GG,Collet JF,Cani PD

更新日期：2020-09-01 00:00:00

abstract：:Two yeast strains isolated from soil collected in Hokkaido, Japan, were found to secrete two extracellular lipases that exhibited activities at both 25 and 4 °C. Both strains could utilize olive oil, rapeseed oil, lard and fish oil as sole carbon sources. The similarity of the D1/D2 domain of the large subunit ribosom...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shimizu Y,Konno Y,Tomita Y

更新日期：2020-02-01 00:00:00

abstract：:A Gram-stain-negative, short rod-shaped bacterium, designated 9-2T, was isolated from a sediment sample collected from a hydrothermal vent field on the south-west Indian Ridge. It formed red colonies, produced carotenoid-like pigments and did not produce bacteriochlorophyll a. Strain 9-2T was positive for hydrolysis o...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wu YH,Zhou P,Jian SL,Liu ZS,Wang CS,Oren A,Xu XW

更新日期：2016-04-01 00:00:00

abstract：:A Gram-negative, rod-shaped, non-spore-forming bacterium (TR6-01T) was isolated from compost near Daejeon city in South Korea. On the basis of 16S rRNA gene sequence similarity, strain TR6-01T was shown to belong to the class Gammaproteobacteria, related to Stenotrophomonas acidaminiphila (97.1 %) and Stenotrophomonas...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yang HC,Im WT,Kang MS,Shin DY,Lee ST

更新日期：2006-01-01 00:00:00

abstract：:A Gram-stain-positive, aerobic, non-motile, rod-shaped actinobacterium, designated strain 21Sc5-5T, was isolated from a soil sample collected in the Taklamakan desert in Xinjiang Uygur Autonomous Region, PR China and investigated by using a polyphasic approach. Strain 21Sc5-5T grew at 10-37 °C (optimum, 28-30 °C), pH ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu SW,Xue CM,Li FN,Sun CH

更新日期：2020-01-01 00:00:00

abstract：:A novel strictly anaerobic bacterium, designated strain BA2-13T, was isolated from a thermophilic industrial-scale biogas plant. Cells were rod-shaped and Gram-stain-positive. Growth occurred at temperatures of 25 to 50 °C and between pH 6.3 and 9.5. Strain BA2-13T produced indole. Cell growth was stimulated by yeast ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahnke S,Langer T,Klocke M

更新日期：2018-03-01 00:00:00

abstract：:A novel Gram-staining-negative, strictly aerobic bacterium, designated BS14(T), was isolated from a marine tidal flat of the South Sea in Korea. Colonies were opaque, white, smooth and circular on marine agar. Cells were moderately halophilic, non-motile rods showing catalase- and oxidase-positive reactions. Growth of...

journal_title：International journal of systematic and evolutionary microbiology

authors： Math RK,Jin HM,Jeong SH,Jeon CO

更新日期：2013-08-01 00:00:00

abstract：:A Gram-stain-positive bacterium, designated strain NIO-1109(T), was isolated from a marine sediment sample from Chorao Island, Goa, India. Phenotypic and chemotaxonomic characteristics and data from phylogenetic analysis based on 16S rRNA gene sequences indicated that strain NIO-1109(T) was related to the genus Exiguo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dastager SG,Mawlankar R,Sonalkar VV,Thorat MN,Mual P,Verma A,Krishnamurthi S,Tang SK,Li WJ

更新日期：2015-05-01 00:00:00

abstract：:A novel Gram-stain-negative, flagellated, rod-shaped, yellow-pigmented aerobic bacterium, strain SA925T, that is capable of degrading 1-methylphenanthrene was isolated from oil-polluted soil collected from a refinery located in Guangzhou, China. Phylogenetic analysis based on the 16S rRNA gene sequence demonstrated th...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sha S,Zhong J,Chen B,Lin L,Luan T

更新日期：2017-02-01 00:00:00

abstract：:Four strains of a hitherto unknown bacterium isolated from vacuum-packaged refrigerated beef were characterized by using phenotypic and phylogenetic methods. The novel strains were Gram-positive, catalase-negative, psychrophilic, rod-shaped bacteria with lactic acid-homofermentative mechanism. Comparative 16S rDNA gen...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sakala RM,Kato Y,Hayashidani H,Murakami M,Kaneuchi C,Ogawa M

更新日期：2002-07-01 00:00:00

abstract：:Strain 853-15A(T) was enriched and isolated from uranium-contaminated aquifer sediment by its ability to grow under anaerobic conditions via the oxidation of lactate coupled to the reduction of anthraquinone-2,6-disulfonate (AQDS) to anthrahydroquinone-2,6-disulfonate (AHQDS). Lactate was oxidized incompletely to acet...

journal_title：International journal of systematic and evolutionary microbiology

authors： Finneran KT,Forbush HM,VanPraagh CV,Lovley DR

更新日期：2002-11-01 00:00:00

abstract：:A polyphasic taxonomic study was performed on six strains of an unknown Gram-positive, non-motile, spore-forming, short oval to rod-shaped bacterium isolated from a swine-manure storage pit. In addition to these strains, an isolate deposited in the Culture Collection of the University of Göteborg (Sweden) was found to...

journal_title：International journal of systematic and evolutionary microbiology

authors： Cotta MA,Whitehead TR,Falsen E,Moore E,Lawson PA

更新日期：2009-01-01 00:00:00

abstract：:A Gram-reaction-negative, rod-shaped, non-motile, red-pigmented bacterium, designated strain GSR3061(T), was isolated from a water sample of the Mangyung estuary enclosed by the Saemangeum Embankment in JEOLlabuk-do of South Korea, and characterized using a polyphasic approach. 16S rRNA gene sequence analysis of strai...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kang JY,Chun J,Jahng KY

更新日期：2013-12-01 00:00:00

abstract：:To obtain amino acid-utilizing sulfate reducers, enrichment culture was carried out with a medium containing Casamino acids and sulfate and inoculated with coastal marine sediment from the eutrophic Tokyo Bay, Japan. A sulfate reducer, designated strain C/L2(T), was isolated from the sulfide-producing enrichment cultu...

journal_title：International journal of systematic and evolutionary microbiology

authors： Takii S,Hanada S,Hase Y,Tamaki H,Uyeno Y,Sekiguchi Y,Matsuura K

更新日期：2008-10-01 00:00:00

abstract：:An aerobic, spore-forming, moderately halophilic bacterium, strain BH260(T), was isolated from a salt lake in China. Cells of this strain were found to be motile rods with flagella. The organism grew optimally at 30-32 degrees C and pH 8.0 in the presence of 12-15% (w/v) NaCl. Phylogenetic analysis based on 16S rRNA g...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lim JM,Jeon CO,Song SM,Lee JC,Ju YJ,Xu LH,Jiang CL,Kim CJ

更新日期：2005-09-01 00:00:00

abstract：:Several nocardioform actinomycetes were isolated from tufaceous surfaces with whitish-grey patinas in the catacombs of St Callistus in Rome, Italy. The morphology of the isolates and their chemotaxonomic characteristics such as LL-diaminopimelic acid in the cell-wall peptidoglycan, the major menaquinone of MK-9(H(4)),...

journal_title：International journal of systematic and evolutionary microbiology

authors： Urzì C,De Leo F,Schumann P

更新日期：2008-09-01 00:00:00

abstract：:A methanogenic organism from the domain Archaea, designated strain T10(T), was isolated from groundwater sampled from a deep diatomaceous shale formation located in Horonobe, Hokkaido, Japan. The strain utilized H2/CO2 and formate as substrates for methanogenesis. Cells were strictly anaerobic, Gram-negative-staining,...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shimizu S,Ueno A,Tamamura S,Naganuma T,Kaneko K

更新日期：2013-11-01 00:00:00

abstract：:A novel non-sporulating, non-motile, catalase- and oxidase-positive, strictly aerobic, Gram-negative, rod-shaped bacterial strain, designated DCA-1(T), was isolated from activated sludge collected from a butachlor wastewater treatment facility. The strain was able to degrade about 85 % of 100 mg butachlor l(-1) within...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zheng JW,Chen YG,Zhang J,Ni YY,Li WJ,He J,Li SP

更新日期：2011-08-01 00:00:00

abstract：:A novel thermophilic, sulfur-oxidizing Gram-negative bacterium, designated strain SS-5T, was isolated from the Calcite Hot Springs in Yellowstone National Park, USA. The cells were motile rods (1.2-2.8 microm long and 0.6-0.8 microm wide). The new isolate was a facultative heterotroph capable of using elemental sulfur...

journal_title：International journal of systematic and evolutionary microbiology

authors： Nakagawa S,Shtaih Z,Banta A,Beveridge TJ,Sako Y,Reysenbach AL

更新日期：2005-11-01 00:00:00

abstract：:Biochemical, molecular chemical and molecular genetic studies were performed on an unknown Gram-positive, catalase-negative, chain-forming coccus isolated from the urine of a patient suffering from cystitis. Comparative 16S rRNA gene sequencing showed that the organism is a member of the 'pyogenic subgroup' of the gen...

journal_title：International journal of systematic and evolutionary microbiology

authors： Collins MD,Hutson RA,Falsen E,Nikolaitchouk N,LaClaire L,Facklam RR

更新日期：2000-05-01 00:00:00