Abstract:
:Proteins are complex structures whose overall stability critically depends on a delicate balance of numerous interactions of similar strength, which are markedly influenced by their environment. Here, we present an analysis of the effect of pH on a protein structure in the crystalline state using RNase A as a model system. By altering only one physico-chemical parameter in a controlled manner, we are able to quantify the structural changes induced in the protein. Atomic resolution X-ray diffraction data were collected for crystals at six pH* values ranging from 5.2 to 8.8, and the six independently refined structures reveal subtle, albeit well-defined variations directly related to the pH titration of the protein. The deprotonation of the catalytic His12 residue is clearly evident in the electron density maps, confirming the reaction mechanism proposed by earlier enzymatic and structural studies. The concerted structural changes observed in the regions remote from the active-site point to an adaptation of the protein structure to the changes in the physico-chemical environment. Analysis of the stereochemistry of the six structures provided accurate estimates of p Kavalues of most of the histidine residues. This study gives further evidence for the advantage of atomic resolution X-ray crystallographic analyses for revealing small but significant structural changes which provide clues to the function of a biological macromolecule.
journal_name
J Mol Bioljournal_title
Journal of molecular biologyauthors
Berisio R,Lamzin VS,Sica F,Wilson KS,Zagari A,Mazzarella Ldoi
10.1006/jmbi.1999.3093keywords:
subject
Has Abstractpub_date
1999-10-01 00:00:00pages
845-54issue
4eissn
0022-2836issn
1089-8638pii
S0022-2836(99)93093-0journal_volume
292pub_type
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