Abstract：
:Human solid tumors are believed to be caused by a sequence of genetic abnormalities arising in the tumor cells. The understanding of these sequences is extremely important for improving cancer treatment. Models for the occurrence of the abnormalities include linear structure and a recently proposed tree-based structure. In this paper we extend the pure oncogenetic tree model by introducing false positive and false negative observations. We state conditions sufficient for the reconstruction of the generating tree. As an example we analyze a comparative genomic hybridization data set and show that addition of the error model significantly improves the ability of the model to describe the data.
journal_name
Math Bioscijournal_title
Mathematical biosciencesauthors
Szabo A,Boucher Kdoi
10.1016/s0025-5564(02)00086-xsubject
Has Abstractpub_date
2002-04-01 00:00:00pages
219-36issue
2eissn
0025-5564issn
1879-3134pii
S002555640200086Xjournal_volume
176pub_type
杂志文章abstract：:The authors determine the time-dependent ligand current into a spherical cell that is covered with a large number of age-dependent receptors. These receptors can be in either of two states: active (i.e., available for ligand binding) or inactive. An active receptor turns inactive upon binding a ligand, and it can reap...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/0025-5564(90)90122-f
更新日期：1990-03-01 00:00:00
abstract：:Half-sib, first cousin, half nth cousin, and nth cousin mating systems are robust in that small deviations from the mating structure will not significantly alter the levels of genetic identity or effect qualitative distinctions between the models. Substitution of nearest kin in matings may either increase or decrease ...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/0025-5564(91)90026-f
更新日期：1991-04-01 00:00:00
abstract：:We propose a new approach for tumor immunotherapy which is based on a switching control strategy defined on domains of attraction of equilibria of interest. For this, we consider a recently derived model which captures the effects of the tumor cells on the immune system and viceversa, through predator-prey competition...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2016.09.008
更新日期：2017-02-01 00:00:00
abstract：:A significant consideration in modeling systems with stages is to obtain models for the individual stages that have probability density functions (pdfs) of residence times that are close to those of the real system. Consequently, the theory of residence time distributions is important for modeling. Here I show first t...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/s0025-5564(02)00110-4
更新日期：2002-11-01 00:00:00
abstract：:A pandemic of a novel Coronavirus emerged in December of 2019 (COVID-19), causing devastating public health impact across the world. In the absence of a safe and effective vaccine or antivirals, strategies for controlling and mitigating the burden of the pandemic are focused on non-pharmaceutical interventions, such a...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2020.108364
更新日期：2020-07-01 00:00:00
abstract：:Determining the future state of individual patients, with regard to the susceptibility to life-threatening condition is a crucial problem in the public health. Chronic Kidney Disease (CKD) is a perilous disease, which is characterized by gradual loss of kidney function. This paper presents a set of mathematical models...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2018.08.013
更新日期：2018-11-01 00:00:00
abstract：:"Protein folding is defined as a process by which a polypeptide chain performs a search in conformational space with the objective of achieving the so-called native conformation to global free-energy minimum under a given set of physiochemical conditions of the medium." Misfolding then, is the process by which this ob...
journal_title：Mathematical biosciences
pub_type： 杂志文章,评审
doi：10.1016/j.mbs.2006.08.008
更新日期：2007-07-01 00:00:00
abstract：:A new biological growth model is introduced. After random selection of possible growth sites, cells are added in an allowable random direction. Unlike the Eden model, the current model is grid independent and can be adapted to any curved surface. Growths of colonies of as many as 10(5) cells are simulated on planar, c...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/s0025-5564(97)00012-6
更新日期：1997-06-01 00:00:00
abstract：:Traits such as skill at foraging and investment in anti-predator defense may vary among individuals within a species population. This intraspecific variation has implications for community dynamics. The implications of intraspecific variation of a consumer in the intermediate level of a tritrophic food chain are explo...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2013.04.008
更新日期：2013-08-01 00:00:00
abstract：:An epidemic model with multiple stages of infection is studied. The model allows for infected individuals to move from advanced stages of infection back to less advanced stages of infection. A threshold parameter which determines the local stability of the disease free equilibrium is found and interpreted. Under condi...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/s0025-5564(02)00149-9
更新日期：2003-01-01 00:00:00
abstract：:A three-dimensional diffusion model with either hexagonal or cylindrical symmetry has been constructed to simulate desorption profiles of hydrophilic chemicals from the topmost layer of human skin (the stratum corneum) as measured in ex vivo studies. The tissue is pierced by skin appendages - sweat glands and hair fol...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2018.03.010
更新日期：2018-06-01 00:00:00
abstract：:A stochastic model for the spread of a sexually transmitted disease (STD) is presented. To reflect varying degrees of promiscuity among individuals it is assumed that the infectivity of any infected individual is proportional to the number of previous contacts the individual has had with other infected individuals. In...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2005.12.016
更新日期：2006-05-01 00:00:00
abstract：:In linear, stochastic dynamics it is shown that the quasideterministic population size is equivalent to the mean population size. The quasideterministic dynamics are defined by the conditional infinitesimal mean of the process. The stochastic component of the dynamics includes both Gaussian and Poisson white noise, wi...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/0025-5564(89)90010-2
更新日期：1989-03-01 00:00:00
abstract：:A biofilm material model and a procedure for numerical integration are developed in this article. They enable calculation of a composite Young's modulus that varies in the biofilm and evolves with deformation. The biofilm-material model makes it possible to introduce a modeling example, produced by the Unified Multi-C...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2014.02.007
更新日期：2014-05-01 00:00:00
abstract：:In the present paper we have first introduced a measure of dynamical entropy of an ecosystem on the basis of the dynamical model of the system. The dynamical entropy which depends on the eigenvalues of the community matrix of the system leads to a consistent measure of complexity of the ecosystem to characterize the d...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2013.07.016
更新日期：2013-10-01 00:00:00
abstract：:Many important results in stochastic epidemic modelling are based on the Reed-Frost model or on other similar models that are characterised by unrealistic temporal dynamics. Nevertheless, they can be extended to many other more realistic models thanks to an argument first provided by Ludwig [Final size distributions f...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2008.08.009
更新日期：2008-11-01 00:00:00
abstract：:Pharmacokinetic models are particularly useful to study the underlying and complex physiological mechanisms contributing to clinical differences across patient subgroups or special populations. Unfortunately, the inherent variability of biological systems and knowledge gaps in physiological data limit confidence in mo...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2018.12.011
更新日期：2019-02-01 00:00:00
abstract：:Some global dynamical properties of catalytic networks, in particular permanence, are closely related with a directed graph representing the differential equation. It can be shown that for every directed graph with a Hamiltonian circuit there is a choice of rate constants such that the system is permanent. On the othe...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/0025-5564(95)00033-x
更新日期：1996-01-15 00:00:00
abstract：:To control emerging infectious diseases like SARS, it is necessary to resort to basic control measures that limit exposures to infectious individuals. These measures include isolating cases at diagnosis, quarantining household members and tracing contacts of diagnosed cases, providing the community with advice on how ...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2004.07.006
更新日期：2005-02-01 00:00:00
abstract：:This paper considers complex models arising in sociobiology. These combine genetic and strategic aspects to model the effect of gene-linked strategies on the ability of individuals to survive to maturity, mate and produce offspring. Several important models considered in the literature are generalised and extended to ...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/s0025-5564(98)10011-1
更新日期：1998-08-01 00:00:00
abstract：:In this paper we study the dynamics of two competing species when one of them is subject to a disease. In order to keep the model simple, we present it under the strong assumption that the disease cannot cross the species barrier. We answer several important questions about the long term behavior of the environment. I...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/s0025-5564(01)00081-5
更新日期：2001-12-01 00:00:00
abstract：:A Gompertz-type diffusion process characterized by the presence of exogenous factors in the drift term is considered. Such a process is able to describe the dynamics of populations in which both the intrinsic rates are modified by means of time-dependent terms. In order to quantify the effect of such terms the evaluat...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2013.01.001
更新日期：2013-09-01 00:00:00
abstract：:The assumptions of well-mixed and zero bulk flow in compartmental analysis are reexamined. Using Poiseuille flow inside and radial flow outside a pore, the mass-transfer equations are solved by perturbations on simple diffusion. Formulas are obtained for solute distribution, total mass transfer, and apparent permeabil...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/0025-5564(89)90054-0
更新日期：1989-07-01 00:00:00
abstract：:In this paper, the problem of robust stability of nonlinear genetic regulatory networks (GRNs) is investigated. The developed method is an integral sliding mode control based redesign for a class of perturbed dissipative switched GRNs with time delays. The control law is redesigned by modifying the dissipativity-based...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2016.02.006
更新日期：2016-05-01 00:00:00
abstract：:When ionizing radiation strikes a cell it induces DNA double strand breaks (DSBs). Subsequently, some of the DSBs misrejoin and thus cause alterations in the size distribution of the DNA fragments. We derive a system of non-linear integro-differential equations describing the misrejoining interactions of five classes ...
journal_title：Mathematical biosciences
pub_type： 杂志文章,评审
doi：10.1016/s0025-5564(98)00006-6
更新日期：1998-05-01 00:00:00
abstract：:Recent work has shown that higher-order terms in population dynamics models can increase the stability, promote the diversity, and better explain the dynamics of ecological systems. While it is known that these perceived benefits come from an increasing number of alternative solutions given by the nature of multivaria...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2019.108222
更新日期：2019-09-01 00:00:00
abstract：:Genetic studies report the existence of a mutant allele Delta32 of CCR5 chemokine receptor gene at high allele frequencies (approximately 10%) in Caucasian populations. The presence of this allele is believed to provide partial or full resistance to HIV. In this study, we look at the impact of education, temporarily e...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2003.11.004
更新日期：2004-02-01 00:00:00
abstract：:This paper investigates problems of disease prevention and epidemic control (DPEC), in which we optimize two sets of decisions: (i) vaccinating individuals and (ii) closing locations, given respective budgets with the goal of minimizing the expected number of infected individuals after intervention. The spread of dise...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2013.09.007
更新日期：2013-11-01 00:00:00
abstract：:The introduction of endosymbiont Wolbachia into laboratory-reared mosquito populations, which are then released to mix with natural populations to prevent the mosquito vectors from reproducing and thus break the transmission cycle of dengue disease, is an innovative new technology. Field trials of Wolbachia-carrying m...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/j.mbs.2018.03.003
更新日期：2018-05-01 00:00:00
abstract：:The only animal of which the complete neural circuitry is known at the submicroscopical level is the nematode Caenorhabditis elegans. This anatomical knowledge is complemented by functional insight from electrophysiological experiments in the related nematode Ascaris lumbricoides, which show that Ascaris motor neurons...
journal_title：Mathematical biosciences
pub_type： 杂志文章
doi：10.1016/0025-5564(93)90033-7
更新日期：1993-11-01 00:00:00
