Purification and characterization of the messenger ribonucleic acid capping enzyme GTP:RNA guanylyltransferase from wheat germ.

Abstract:

:A GTP:RNA guanylyltransferase or capping enzyme has been purified approximately 2000-fold from wheat germ. The enzyme catalyzes the transfer of the GMP residue from GTP to the 5' end of RNA or synthetic polyribonucleotides. Diphosphate-ended polymers were capped more efficiently than molecules with triphosphate ends, and molecules with monophosphate ends were not capped at all. There appears to be little specificity since RNAs with purine or pyrimidine ends served as acceptors. Other features of the wheat germ RNA guanylyltransferase include relatively low Km values for GTP (2.7 microM) and ppA (pA)n (14.2 nM), a divalent cation requirement satisfied by low (0.5 mM) concentrations of MnCl2 or higher (5 mM) concentrations of MgCl2, and a pH optimum around neutrality.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Keith JM,Venkatesan S,Gershowitz A,Moss B

doi

10.1021/bi00531a020

subject

Has Abstract

pub_date

1982-01-19 00:00:00

pages

327-33

issue

2

eissn

0006-2960

issn

1520-4995

journal_volume

21

pub_type

杂志文章
  • Phospholipid spin probes measure the effects of ethanol on the molecular order of liver microsomes.

    abstract::Ethanol, in vitro, is known to perturb the molecular order of the phospholipids in biological membranes, while chronic ethanol exposure, in vivo, leads to resistance to disordering. Such changes have usually been measured by electron spin resonance, utilizing fatty acid spin probes. The use of such probes is controver...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00346a012

    authors: Taraschi TF,Wu A,Rubin E

    更新日期:1985-12-03 00:00:00

  • Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.

    abstract::NahE and PhdJ are bifunctional hydratase-aldolases in bacterial catabolic pathways for naphthalene and phenanthrene, respectively. Bacterial species with these pathways can use polycyclic aromatic hydrocarbons (PAHs) as sole sources of carbon and energy. Because of the harmful properties of PAHs and their widespread d...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00532

    authors: LeVieux JA,Medellin B,Johnson WH Jr,Erwin K,Li W,Johnson IA,Zhang YJ,Whitman CP

    更新日期:2018-06-26 00:00:00

  • Self-association of linker histone H5 and of its globular domain: evidence for specific self-contacts.

    abstract::The ability of avian-specific linker histone H5, and the globular domains of H5 (GH5) and H1(0) (GH1(0), to self-associate either free in solution or when bound to DNA was investigated. All three proteins underwent a salt-dependent increase in turbidity that may be indicative of nonspecific interactions. Dithiobis(suc...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi980716v

    authors: Carter GJ,van Holde K

    更新日期:1998-09-08 00:00:00

  • Effects of a surfactant-associated protein and calcium ions on the structure and surface activity of lung surfactant lipids.

    abstract::Previous studies have demonstrated that lung-specific proteins are associated with surfactant lipids, particularly the highly surface active subfraction known as tubular myelin. We have isolated a surfactant-associated protein complex with molecular weight components of 36 000, 32 000, and 28 000 and reassembled it wi...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00322a026

    authors: Hawgood S,Benson BJ,Hamilton RL Jr

    更新日期:1985-01-01 00:00:00

  • Use of azidobestatin as a photoaffinity label to identify the active site peptide of leucine aminopeptidase.

    abstract::Aminopeptidases catalyze the hydrolysis of amino acid residues from the amino terminus of peptide substrates. They are found in most cells and tissues, and their activity has been implicated in myriad fundamental biochemical and physiological processes. Nevertheless, little is known about the structure of the aminopep...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00131a034

    authors: Taylor A,Peltier CZ,Jahngen EG Jr,Laxman E,Szewczuk Z,Torre FJ

    更新日期:1992-04-28 00:00:00

  • Effects of nucleotide- and aurodox-induced changes in elongation factor Tu conformation upon its interactions with aminoacyl transfer RNA. A fluorescence study.

    abstract::The effects of GDP and of aurodox (N-methylkirromycin) on the affinity of elongation factor Tu (EF-Tu) for aminoacyl-tRNA (aa-tRNA) have been quantified spectroscopically by using Phe-tRNA(Phe)-Fl8, a functionally active analogue of Phe-tRNA(Phe) with a fluorescein dye convalently attached to the s4U-8 base. The assoc...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00459a014

    authors: Dell VA,Miller DL,Johnson AE

    更新日期:1990-02-20 00:00:00

  • Laser flash photolysis studies of the kinetics of reduction of spinach and Clostridium ferredoxins by a viologen analogue: electrostatically controlled nonproductive complex formation and differential reactivity among the iron-sulfur clusters.

    abstract::We have studied the transient kinetics of electron transfer from a positively charged viologen analogue (propylene diquat), reduced by pulsed laser excitation of the deazariboflavin/EDTA system, to the net negatively charged ferredoxins from spinach and Clostridium pasteurianum. Spinach ferredoxin showed monophasic ki...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00440a050

    authors: Navarro JA,Cheddar G,Tollin G

    更新日期:1989-07-11 00:00:00

  • Binding of platinum(II) intercalation reagents to deoxyribnonucleic acid. Dependence on base-pair composition, nature of the intercalator, and ionic strength.

    abstract::The DNA binding of three platinum(II) intercalation reagents has been studied and found to depend upon base composition, the nature of the intercalator, and the ionic strength of the solvent medium. In 0.2 M NaCl, binding data for calf thymus DNA show the association constants to be approximately 10(4) M-1. The bindin...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00593a003

    authors: Howe-Grant M,Lippard SJ

    更新日期:1979-12-25 00:00:00

  • Studies of the interaction of the viral suppressor of RNA silencing protein p19 with small RNAs using fluorescence polarization.

    abstract::Tombusviruses use a 19 kDa protein (p19) as a suppressor of the RNA silencing pathway during infection. The p19 protein binds to short-interfering RNA (siRNA) as a dimer and shows a high selectivity for short duplex RNAs over other RNA species. Since p19 can bind to synthetic and RNA silencing generated small RNAs wit...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi800401y

    authors: Cheng J,Sagan SM,Jakubek ZJ,Pezacki JP

    更新日期:2008-08-05 00:00:00

  • Molecular dynamics simulations of pentapeptides at interfaces: salt bridge and cation-pi interactions.

    abstract::Peptide-membrane interactions are important for understanding the binding, partitioning, and folding of membrane proteins; the activity of antimicrobial and fusion peptides; and a number of other processes. We describe molecular dynamics simulations (10-25 ns) of two pentapeptides Ace-WLXLL (with X = Arg or Lys side c...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi027001j

    authors: Aliste MP,MacCallum JL,Tieleman DP

    更新日期:2003-08-05 00:00:00

  • Rapid isolation of OmpF porin-LPS complexes suitable for structure-function studies.

    abstract::A gentle and rapid isolation procedure is described yielding fractions containing better than 95% pure OmpF porin of Escherichia coli BE with different amounts of bound lipopolysaccharide (LPS). The procedure employs continuous free-flow electrophoresis (FFE) in the presence of detergent above its critical micelle con...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00436a010

    authors: Holzenburg A,Engel A,Kessler R,Manz HJ,Lustig A,Aebi U

    更新日期:1989-05-16 00:00:00

  • Binding energetics of phosphorus-containing inhibitors of thermolysin.

    abstract::The importance of a specific hydrogen bond between thermolysin and a phosphonamidate inhibitor, Z-NHCH2-PO(O-)-Leu-Leu (1) [Bartlett, P. A., & Marlowe, C. K. (1987) Science (Washington D.C.) 235, 569-571], has been reevaluated. We have determined the inhibition constants (binding free energies) for thermolysin of phos...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00438a006

    authors: Grobelny D,Goli UB,Galardy RE

    更新日期:1989-06-13 00:00:00

  • Isolation and in vitro phosphorylation of sensory transduction components controlling anaerobic induction of light harvesting and reaction center gene expression in Rhodobacter capsulatus.

    abstract::Anaerobic induction of light harvesting and reaction center gene expression involves two transacting factors termed RegA and RegB. Sequence and mutational analysis has indicated that RegA and RegB constitute cognate components of a prokaryotic sensory transduction cascade with RegB comprising a membrane-spanning senso...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00002a002

    authors: Inoue K,Kouadio JL,Mosley CS,Bauer CE

    更新日期:1995-01-17 00:00:00

  • Crystal structures of potent thiol-based inhibitors bound to carboxypeptidase B.

    abstract::This paper presents the crystal structure of porcine pancreatic carboxypeptidase B (pp-CpB) in complex with a variety of thiol-based inhibitors that were developed as antagonists of activated thrombin-activatable fibrinolysis inhibitor (TAFIa). Recent studies have indicated that a selective inhibitor of TAFIa could en...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0501941

    authors: Adler M,Bryant J,Buckman B,Islam I,Larsen B,Finster S,Kent L,May K,Mohan R,Yuan S,Whitlow M

    更新日期:2005-07-05 00:00:00

  • Significance of hydrophobic S4-P4 interactions in subtilisin 309 from Bacillus lentus.

    abstract::The subtilisins have an extended substrate binding cleft comprising at least 8 subsites. Two pockets at the S1 and S4 sites are particularly conspicuous, and the interactions between substrate and these two pockets are very important for the substrate specificity. Phe residues have mutationally been introduced at one ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00062a016

    authors: Bech LM,Sørensen SB,Breddam K

    更新日期:1993-03-23 00:00:00

  • Orientation of type VI collagen monomers in molecular aggregates.

    abstract::Type VI collagen, prepared from guanidine extracts of human amnion, contains very little monomeric material, the major forms being dimers and tetramers. In order to study the orientation of the molecules in these aggregates, they were digested with pepsin followed by bacterial collagenase. Two fragments were isolated,...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00435a020

    authors: Kuo HJ,Keene DR,Glanville RW

    更新日期:1989-05-02 00:00:00

  • Active site of bee venom phospholipase A2: the role of histidine-34, aspartate-64 and tyrosine-87.

    abstract::In bee venom phospholipase A2, histidine-34 probably functions as a Brønsted base to deprotonate the attacking water. Aspartate-64 and tyrosine-87 form a hydrogen bonding network with histidine-34. We have prepared mutants at these positions and studied their kinetic properties. The mutant in which histidine-34 is cha...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9528412

    authors: Annand RR,Kontoyianni M,Penzotti JE,Dudler T,Lybrand TP,Gelb MH

    更新日期:1996-04-09 00:00:00

  • In vitro biosynthesis of a decasaccharide prototype of multiply branched polylactosaminoglycan backbones.

    abstract::Multiply branched polylactosaminoglycans are expressed in glycoproteins and glycolipids of many cells. Interest in their biology stems from their abundant expression in early embryonal cells and from their ability to carry multiple lectin-binding determinants, which makes them prominent ligands and antagonists of cell...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9627673

    authors: Leppanen A,Salminen H,Zhu Y,Maaheimo H,Helin J,Costello CE,Renkonen O

    更新日期:1997-06-10 00:00:00

  • Effects of phospholipase A2 digestion on the carotenoid and bacteriochlorophyll components of the light-harvesting complexes in Rhodobacter sphaeroides chromatophores.

    abstract::The instantaneous electrochromic response of carotenoids associated with the B800-850 light-harvesting complex of Rhodobacter sphaeroides has been used widely as an intrinsic probe of membrane potential. In the present study, the structural basis for this phenomenon was examined by phospholipase A2 digestion of chroma...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00054a017

    authors: Olivera LM,Niederman RA

    更新日期:1993-01-26 00:00:00

  • Halide and proton binding kinetics of yellow fluorescent protein variants.

    abstract::A T203Y substitution in green fluorescent protein causes a red shift in emission to yield a class of mutants known as yellow fluorescent protein (YFP). Many of these YFP mutants bind halides with affinities in the millimolar range, which often results in the chromophore pK values being shifted into the physiological r...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi3016839

    authors: Seward HE,Basran J,Denton R,Pfuhl M,Muskett FW,Bagshaw CR

    更新日期:2013-04-09 00:00:00

  • Solution conformation of asparagine-linked oligosaccharides: alpha(1-2)-, alpha(1-3)-, beta(1-2)-, and beta(1-4)-linked units.

    abstract::The solution conformation is presented for representatives of each of the major classes of asparaginyl oligosaccharides. In this report the conformation of alpha(1-3)-, alpha(1-2)-, beta(1-2)-, and beta(1-4)-linked units is described. The conformational properties of these glycopeptides were determined by high-resolut...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00284a021

    authors: Brisson JR,Carver JP

    更新日期:1983-07-19 00:00:00

  • Optical spectroscopy of nicotinoprotein alcohol dehydrogenase from Amycolatopsis methanolica: a comparison with horse liver alcohol dehydrogenase and UDP-galactose epimerase.

    abstract::The NADH absorbance spectrum of nicotinoprotein (NADH-containing) alcohol dehydrogenase from Amycolatopsis methanolica has a maximum at 326 nm. Reduced enzyme-bound pyridine dinucleotide could be reversibly oxidized by acetaldehyde. The fluorescence excitation spectrum for NADH bound to the enzyme has a maximum at 325...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972115u

    authors: Piersma SR,Visser AJ,de Vries S,Duine JA

    更新日期:1998-03-03 00:00:00

  • Splicing Site Recognition by Synergy of Three Domains in Splicing Factor RBM10.

    abstract::Splicing factor RBM10 and its close homologues RBM5 and RBM6 govern the splicing of oncogenes such as Fas, NUMB, and Bcl-X. The molecular architecture of these proteins includes zinc fingers (ZnFs) and RNA recognition motifs (RRMs). Three of these domains in RBM10 that constitute the RNA binding part of this splicing ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b01242

    authors: Serrano P,Hammond JA,Geralt M,Wüthrich K

    更新日期:2018-03-13 00:00:00

  • The structure of chromatin: interaction of ethidium bromide with native and denatured chromatin.

    abstract::The binding of ethidium bromide, as monitored by fluorescence enhancement, to chromatin prepared by nuclease digestion has been compared with the binding of the dye to sheared chromatin. The nuclease preparation (native chromatin) is characterized by a high affinity region of the Scatchard plot (r = 0-0.025, K1 = 1 X ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00622a002

    authors: Paoletti J,Magee BB,Magee PT

    更新日期:1977-02-08 00:00:00

  • Structural and dynamic study of the tetramerization region of non-erythroid alpha-spectrin: a frayed helix revealed by site-directed spin labeling electron paramagnetic resonance.

    abstract::The N-terminal region of alpha-spectrin is responsible for its association with beta-spectrin in a heterodimer, forming functional tetramers. Non-erythroid alpha-spectrin (alphaII-spectrin) has a significantly higher association affinity for beta-spectrin than the homologous erythroid alpha-spectrin (alphaI-spectrin)....

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi8013032

    authors: Li Q,Fung LW

    更新日期:2009-01-13 00:00:00

  • Substrate-Induced Facilitated Dissociation of the Competitive Inhibitor from the Active Site of O-Acetyl Serine Sulfhydrylase Reveals a Competitive-Allostery Mechanism.

    abstract::By classical competitive antagonism, a substrate and competitive inhibitor must bind mutually exclusively to the active site. The competitive inhibition of O-acetyl serine sulfhydrylase (OASS) by the C-terminus of serine acetyltransferase (SAT) presents a paradox, because the C-terminus of SAT binds to the active site...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.7b00500

    authors: Singh AK,Ekka MK,Kaushik A,Pandya V,Singh RP,Banerjee S,Mittal M,Singh V,Kumaran S

    更新日期:2017-09-19 00:00:00

  • Groups with polar characteristics can locate at both shallow and deep locations in membranes: the behavior of dansyl and related probes.

    abstract::To understand the relationship between the chemical structure of polar molecules and their membrane location, the behavior of dansyl (dimethylaminonaphthalenesulfonyl) and related polar fluorescent probes was examined. The depth of these probes in lipid bilayers was determined by parallax analysis of fluorescence quen...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9726234

    authors: Asuncion-Punzalan E,Kachel K,London E

    更新日期:1998-03-31 00:00:00

  • Binding of human fibroblast interferon to concanavalin A-agarose. Involvement of carbohydrate recognition and hydrophobic interaction.

    abstract::Human fibroblast interferon binds to a concanavalin A-agarose (Con A-Sepharose) equilibrated with methyl alpha-D-mannopyranoside, or levan; in contrast, it is only partially retarded on a similar column equilibrated with ethylene glycol. Interferon does not bind, however, to a lectin column equilibrated with both meth...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00648a039

    authors: Davey MW,Sulkowski E,Carter WA

    更新日期:1976-02-10 00:00:00

  • Isolation of high-affinity peptide antagonists of 14-3-3 proteins by phage display.

    abstract::The 14-3-3 proteins interact with diverse cellular molecules involved in various signal transduction pathways controlling cell proliferation, transformation, and apoptosis. To aid our investigation of the biological function of 14-3-3 proteins, we have set out to identify high-affinity antagonists. By screening phage ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi991353h

    authors: Wang B,Yang H,Liu YC,Jelinek T,Zhang L,Ruoslahti E,Fu H

    更新日期:1999-09-21 00:00:00

  • Cell-specific physical and functional coupling of human 5-HT1A receptors to inhibitory G protein alpha-subunits and lack of coupling to Gs alpha.

    abstract::We have studied the physical and functional linkages of heterologously expressed human 5-HT1A receptors to G protein alpha-subunits in HeLa and CHO-K1 cells. HeLa cells expressed immunoreactivity to G(i) proteins with an apparent rank order of G(i) alpha 3 (approximately 1 pmol/mg of protein) > G(i) alpha 1 (approxima...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00092a016

    authors: Raymond JR,Olsen CL,Gettys TW

    更新日期:1993-10-19 00:00:00