Outbreak caused by a multidrug-resistant Klebsiella pneumoniae clone carrying blaVIM-12 in a university hospital.

Abstract:

:From November 2006 to April 2007, nine nonrepetitive isolates of Klebsiella pneumoniae with reduced susceptibility or resistance to carbapenems were recovered from clinical specimens from separate patients hospitalized in a tertiary care hospital. The imipenem-EDTA synergy test was positive for all isolates. PCR, sequencing, and transferability experiments revealed the novel bla(VIM-12) metallo-beta-lactamase gene, which was plasmid mediated and located in a class 1 integron. Pulsed-field gel electrophoresis demonstrated a single macrorestriction pattern, indicating the clonal spread of VIM-12-producing K. pneumoniae.

journal_name

J Clin Microbiol

authors

Tokatlidou D,Tsivitanidou M,Pournaras S,Ikonomidis A,Tsakris A,Sofianou D

doi

10.1128/JCM.01573-07

subject

Has Abstract

pub_date

2008-03-01 00:00:00

pages

1005-8

issue

3

eissn

0095-1137

issn

1098-660X

pii

JCM.01573-07

journal_volume

46

pub_type

杂志文章
  • Escherichia coli O157:H7 and O157:H(-) strains that do not produce Shiga toxin: phenotypic and genetic characterization of isolates associated with diarrhea and hemolytic-uremic syndrome.

    abstract::We have isolated one sorbitol-nonfermenting (SNF) Escherichia coli O157:H7 isolate and five sorbitol-fermenting (SF) E. coli O157:H(-) isolates that do not contain Shiga toxin (Stx) genes (stx). Isolates originated from patients with diarrhea (n = 4) and hemolytic-uremic syndrome (HUS) (n = 2). All isolates harbored a...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.37.11.3491-3496.1999

    authors: Schmidt H,Scheef J,Huppertz HI,Frosch M,Karch H

    更新日期:1999-11-01 00:00:00

  • Indirect fluorescent antibody procedure for the rapid detection and identification of Bacteroides and Fusobacterium in clinical specimens.

    abstract::An indirect fluorescent antibody (IFA) technique was evaluated as a procedure for rapid detection and identification of members of the Bacteroidaceae. Antisera were prepared against 31 members of this family, including species of Bacteroides and Fusobacterium commonly isolated from human infections. The antisera had d...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:

    authors: Stauffer LR,Hill EO,Holland JW,Altemeier WA

    更新日期:1975-10-01 00:00:00

  • Comparison of automated Difco ESP blood culture system with biphasic BBL Septi-Chek system for detection of bloodstream infections in pediatric patients.

    abstract::We compared the Difco ESP 384 blood culture system with the pediatric Septi-Chek system for the detection of bloodstream infections in pediatric patients. A total of 10,762 blood culture sets included an ESP aerobic bottle and a Septi-Chek bottle. From these cultures, a total of 278 organisms classified as probable pa...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.33.5.1084-1088.1995

    authors: Welby PL,Keller DS,Storch GA

    更新日期:1995-05-01 00:00:00

  • Detection of RNA of mumps virus during an outbreak in a population with a high level of measles, mumps, and rubella vaccine coverage.

    abstract::The duration of mumps virus RNA detection was studied during a mumps outbreak in a highly vaccinated university population. Seven of the eight reverse transcription-PCR-positive specimens were collected during the first 3 days of parotitis, suggesting that viral shedding is minimal after the first 3 days of symptoms. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01803-07

    authors: Bitsko RH,Cortese MM,Dayan GH,Rota PA,Lowe L,Iversen SC,Bellini WJ

    更新日期:2008-03-01 00:00:00

  • Screening of active lyssavirus infection in wild bat populations by viral RNA detection on oropharyngeal swabs.

    abstract::Brain analysis cannot be used for the investigation of active lyssavirus infection in healthy bats because most bat species are protected by conservation directives. Consequently, serology remains the only tool for performing virological studies on natural bat populations; however, the presence of antibodies merely re...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.39.10.3678-3683.2001

    authors: Echevarría JE,Avellón A,Juste J,Vera M,Ibáñez C

    更新日期:2001-10-01 00:00:00

  • Medium-dependent zone size discrepancies associated with susceptibility testing of group D streptococci against various cephalosporins.

    abstract::Mueller-Hinton (MH) agar media from various commercial sources, either supplemented or not supplemented with 5% sheep blood, were studied to determine their effect on disk diffusion susceptibility testing results obtained with 90 strains of group D streptococci and four cephalosporins. The cephalosporins investigated ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.18.4.858-865.1983

    authors: Sahm DF,Baker CN,Jones RN,Thornsberry C

    更新日期:1983-10-01 00:00:00

  • Xpert MTB/RIF assay for diagnosis of pleural tuberculosis.

    abstract::We prospectively investigated the diagnostic utility of the Xpert MTB/RIF (Mycobacterium tuberculosis/rifampin [RIF] resistance) assay in 20 cases with confirmed tuberculous pleural effusion. The sensitivity and specificity of the Xpert assay in pleural fluid were 25% and 100%, respectively. All cases positive by the ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.05454-11

    authors: Friedrich SO,von Groote-Bidlingmaier F,Diacon AH

    更新日期:2011-12-01 00:00:00

  • Usefulness of High-Quality Core Genome Single-Nucleotide Variant Analysis for Subtyping the Highly Clonal and the Most Prevalent Salmonella enterica Serovar Heidelberg Clone in the Context of Outbreak Investigations.

    abstract::Salmonella enterica serovar Heidelberg is the second most frequently occurring serovar in Quebec and the third-most prevalent in Canada. Given that conventional pulsed-field gel electrophoresis (PFGE) subtyping for common Salmonella serovars, such as S. Heidelberg, yields identical subtypes for the majority of isolate...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.02200-15

    authors: Bekal S,Berry C,Reimer AR,Van Domselaar G,Beaudry G,Fournier E,Doualla-Bell F,Levac E,Gaulin C,Ramsay D,Huot C,Walker M,Sieffert C,Tremblay C

    更新日期:2016-02-01 00:00:00

  • Serotyping of Streptococcus pneumoniae isolates from nasopharyngeal samples: use of an algorithm combining microbiologic, serologic, and sequential multiplex PCR techniques.

    abstract::We evaluated nasopharyngeal carriage of Streptococcus pneumoniae (pneumococci) in nine Alaskan communities and used an algorithm combining microbiologic, serologic, and sequential multiplex PCR (MP-PCR) techniques to serotype the isolates. After microbiological identification as pneumococci, isolates (n = 1,135) were ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00610-11

    authors: Miernyk K,Debyle C,Harker-Jones M,Hummel KB,Hennessy T,Wenger J,Rudolph K

    更新日期:2011-09-01 00:00:00

  • The Past, Present, and (Possible) Future of Serologic Testing for Lyme Disease.

    abstract::Lyme disease prevails as the most commonly transmitted tick-borne infection in the United States, and serologic evaluation for antibodies to Borrelia burgdorferi remains the recommended modality for diagnosis. This review presents a brief historical perspective on the evolution of serologic assays for Lyme disease and...

    journal_title:Journal of clinical microbiology

    pub_type: 历史文章,杂志文章,评审

    doi:10.1128/JCM.03394-15

    authors: Theel ES

    更新日期:2016-05-01 00:00:00

  • Evaluation of the Becton Dickinson Directigen test for respiratory syncytial virus in nasopharyngeal aspirates.

    abstract::A premarket trial of the Becton Dickinson Directigen respiratory syncytial virus membrane-based enzyme immunoassay compared the test with virus isolation for the detection of respiratory syncytial virus in 583 nasopharyngeal aspirates. After modification, the Directigen test showed a sensitivity of 83% and a specifici...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.28.6.1458-1459.1990

    authors: Kok T,Barancek K,Burrell CJ

    更新日期:1990-06-01 00:00:00

  • Survival of Acinetobacter baumannii on dry surfaces: comparison of outbreak and sporadic isolates.

    abstract::Acinetobacter spp. are important nosocomial pathogens reported with increasing frequency in outbreaks of cross-infection during the past 2 decades. The majority of such outbreaks are caused by Acinetobacter baumannii. To investigate whether desiccation tolerance may be involved in the ability of certain strains of A. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.36.7.1938-1941.1998

    authors: Jawad A,Seifert H,Snelling AM,Heritage J,Hawkey PM

    更新日期:1998-07-01 00:00:00

  • Detection of virus-specific immunoglobulins using a doubly labeled fluorescein-125I antibody.

    abstract::Commercially prepared fluorescein-labeled antihuman antibodies were labed with 125I and used to compre specific herpes simplex virus antibody titers as determined by indirect fluorescent antibody and radioimmunoassay techniques. Total virus-specific immunoglobulin and virus-specific immunoglobulin G titers did not var...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:

    authors: Parkinson AJ,Kalmakoff J

    更新日期:1976-06-01 00:00:00

  • Quantitative competitive PCR with bronchoalveolar lavage fluid for diagnosis of toxoplasmosis in AIDS patients.

    abstract::Of 121 AIDS patients, 12 (10%) had Toxoplasma gondii DNA detected by competitive PCR in their bronchoalveolar lavage samples. Quantitation of the PCR results showed a correlation between the parasite burden and the serum lactic dehydrogenase titer. Quantitative competitive PCR could be useful to assess the diagnosis a...

    journal_title:Journal of clinical microbiology

    pub_type: 临床试验,杂志文章

    doi:10.1128/JCM.33.6.1662-1664.1995

    authors: Bretagne S,Costa JM,Fleury-Feith J,Poron F,Dubreuil-Lemaire ML,Vidaud M

    更新日期:1995-06-01 00:00:00

  • Quantitation of human immunodeficiency virus type 1 RNA in plasma by using blood dried on filter paper.

    abstract::We compared whole blood dried on filter paper to the standard assay with frozen cell-free plasma for use in the quantitation of the human immunodeficiency virus RNA load in blood. RNA values from filter paper, corrected for the hematocrit, gave results comparable to those of the standard assay in terms of sensitivity ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.36.1.258-260.1998

    authors: Fiscus SA,Brambilla D,Grosso L,Schock J,Cronin M

    更新日期:1998-01-01 00:00:00

  • Rapid identification of Burkholderia pseudomallei in blood cultures by a monoclonal antibody assay.

    abstract::Burkholderia pseudomallei is the causative agent of melioidosis. In northeast Thailand, this gram-negative bacterium is a major cause of mortality from septicemia. The definitive diagnosis of this disease is made by bacterial culture. In this study, we produced a monoclonal antibody (MAb) specific to the 30-kDa protei...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.37.11.3662-3667.1999

    authors: Pongsunk S,Thirawattanasuk N,Piyasangthong N,Ekpo P

    更新日期:1999-11-01 00:00:00

  • Development of an enzyme-linked immunosorbent assay for studying Vibrio cholerae cell surface antigens.

    abstract::An enzyme-linked immunosorbent assay for the measurement of antibodies directed against cell surface antigens of Vibrio cholerae (CSA ELISA) was developed. NaN3-killed whole cells of V. cholerae, adsorbed to polystyrene tubes, were used as immobilized antigens. The assay was capable of detecting antibodies directed ag...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.16.1.41-45.1982

    authors: Cryz SJ Jr,Fürer E,Germanier R

    更新日期:1982-07-01 00:00:00

  • Detection of Shigella dysenteriae type 1 and Shigella flexneri in feces by immunomagnetic isolation and polymerase chain reaction.

    abstract::A combination of immunomagnetic separation (IMS) and a polymerase chain reaction (PCR) procedure was used for direct isolation and identification of Shigella dysenteriae type 1 and Shigella flexneri from feces. Immunomagnetic particles were coated with monoclonal antibody MASFB, which is specific for a common epitope ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.30.11.2801-2806.1992

    authors: Islam D,Lindberg AA

    更新日期:1992-11-01 00:00:00

  • Detection of Giardia lamblia, Entamoeba histolytica/Entamoeba dispar, and Cryptosporidium parvum antigens in human fecal specimens using the triage parasite panel enzyme immunoassay.

    abstract::The Triage parasite panel (BIOSITE Diagnostics, San Diego, Calif.) is a new qualitative enzyme immunoassay (EIA) panel for the detection of Giardia lamblia, Entamoeba histolytica/E. dispar, and Cryptosporidium parvum in fresh or fresh, frozen, unfixed human fecal specimens. By using specific antibodies, antigens speci...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.38.9.3337-3340.2000

    authors: Garcia LS,Shimizu RY,Bernard CN

    更新日期:2000-09-01 00:00:00

  • Use of the BacT/alert system for rapid detection of microbial contamination in a pilot study using pancreatic islet cell products.

    abstract::At the Islet Isolation Laboratory of the Scottish National Blood Transfusion Service, manual sterility testing data show that contamination rates are 57.7% for pancreas transport fluid, 4.3% for postpurification islet samples, and 0% for pretransplant islet samples. This pilot study presents the BacT/Alert System as a...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00447-14

    authors: Murray L,McGowan N,Fleming J,Bailey L

    更新日期:2014-10-01 00:00:00

  • Molecular identification of Gemella species from three patients with endocarditis.

    abstract::Gemella morbillorum and Gemella haemolysans are opportunistic pathogens which cause endocarditis and other severe infections. We report on three patients with endocarditis, one with endocarditis caused by G. haemolysans and two with endocarditis caused by G. morbillorum. The paucity of reports concerning these bacteri...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章,评审

    doi:10.1128/JCM.36.4.866-871.1998

    authors: La Scola B,Raoult D

    更新日期:1998-04-01 00:00:00

  • Comparison of the yields of blood cultures using serum or plasma from patients with early Lyme disease.

    abstract::In an initial experiment, culture-grown Borrelia burgdorferi was added to freshly collected uninfected human blood. This in vitro study demonstrated that more spirochetes were distributed into the plasma than into the serum fraction. In a subsequent clinical study, B. burgdorferi was recovered from plasma cultures of ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.38.4.1648-1650.2000

    authors: Wormser GP,Bittker S,Cooper D,Nowakowski J,Nadelman RB,Pavia C

    更新日期:2000-04-01 00:00:00

  • Differentiation of Peptococcus and Peptostreptococcus by gas-liquid chromatography of cellular fatty acids and metabolic products.

    abstract::Gas-liquid chromatographic (GLC) profiles of cellular fatty acids and metabolic products were useful in identifying strains of Peptococcus saccharolyticus, Peptococcus asaccharolyticus, Peptostreptococcus anaerobius, Peptostreptococcus micros, and Streptococcus intermedius. The GLC results supported the recent taxonom...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.10.4.464-476.1979

    authors: Lambert MA,Armfield AY

    更新日期:1979-10-01 00:00:00

  • Toward molecular parasitologic diagnosis: enhanced diagnostic sensitivity for filarial infections in mobile populations.

    abstract::The diagnosis of filarial infections among individuals residing in areas where the disease is not endemic requires both strong clinical suspicion and expert training in infrequently practiced parasitological methods. Recently developed filarial molecular diagnostic assays are highly sensitive and specific but have lim...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01697-10

    authors: Fink DL,Fahle GA,Fischer S,Fedorko DF,Nutman TB

    更新日期:2011-01-01 00:00:00

  • Comparison of methods for cultivation and isolation of Chlamydia trachomatis.

    abstract::McCoy cells treated with cycloheximide, iododeoxyuridine, and DEAE-dextran and untreated McCoy cells were inoculated with two stock strains of Chlamydia trachomatis and with 231 urethral specimens from men, 53 (23%) of which contained C. trachomatis. Isolation rates, number and quality of inclusions, and quality of th...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.16.5.847-850.1982

    authors: Benes S,McCormack WM

    更新日期:1982-11-01 00:00:00

  • Evaluation of a quantitative fluorescence immunoassay (FIAX) for detection of serum antibody to Borrelia burgdorferi.

    abstract::A quantitative, indirect, fluorescence immunoassay (FIAX; Whittaker Bioproducts, Inc.) was compared with the conventional indirect fluorescent-antibody test for detection of serum antibody to Borrelia burgdorferi. FIAX correlated well with the indirect fluorescent-antibody test (r = 0.72). FIAX is a convenient and dep...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.25.11.2218-2220.1987

    authors: Pennell DR,Wand PJ,Schell RF

    更新日期:1987-11-01 00:00:00

  • Molecular typing of Treponema pallidum in the Czech Republic during 2011 to 2013: increased prevalence of identified genotypes and of isolates with macrolide resistance.

    abstract::From January 2011 to December 2013, a total of 262 samples, from 188 patients suspected of having syphilis were tested for the presence of treponemal DNA by PCR amplification of five chromosomal loci, including the polA (TP0105), tmpC (TP0319), TP0136, TP0548, and 23S rRNA genes. Altogether, 146 samples from 103 patie...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01292-14

    authors: Grillová L,Pĕtrošová H,Mikalová L,Strnadel R,Dastychová E,Kuklová I,Kojanová M,Kreidlová M,Vaňousová D,Hercogová J,Procházka P,Zákoucká H,Krchňáková A,Vašků V,Šmajs D

    更新日期:2014-10-01 00:00:00

  • Detection of Campylobacter jejuni by culture and real-time PCR in a French cohort of patients with Guillain-Barre syndrome.

    abstract::Bacteriological culture and real-time PCR (RT-PCR) were used to detect Campylobacter jejuni in fecal samples from a French cohort of 237 patients with Guillain-Barré syndrome (GBS). We provide evidence that diverse serotypes and genotypes of C. jejuni are a major trigger of GBS in France. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.00381-10

    authors: Sivadon-Tardy V,Orlikowski D,Porcher R,Ronco E,Caudie C,Roussi J,Fauchère JL,Mégraud F,Tabor H,Sharshar T,Annane D,Raphaël JC,Gaillard JL

    更新日期:2010-06-01 00:00:00

  • Replicate Aptima Assay for Quantifying Residual Plasma Viremia in Individuals on Antiretroviral Therapy.

    abstract::Detection of residual plasma viremia in antiretroviral therapy (ART)-suppressed HIV-infected individuals is critical for characterizing the latent reservoir and evaluating the impact of cure interventions. Ultracentrifugation-based single-copy assays are sensitive but labor intensive. Fully automated replicate testing...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.01400-20

    authors: Bakkour S,Deng X,Bacchetti P,Grebe E,Montalvo L,Worlock A,Stone M,Deeks SG,Richman DD,Busch MP

    更新日期:2020-11-18 00:00:00

  • Quantitative PCR for human herpesviruses 6 and 7.

    abstract::A quantitative PCR assay for the detection of human herpesvirus 6 (HHV-6) (variants A and B) and HHV-7 DNAs in clinical samples was developed. The assay uses a nonhomologous internal standard (IS) for each virus that is coamplified with the wild-type target sequence in the same vial and with the same pair of primers. ...

    journal_title:Journal of clinical microbiology

    pub_type: 杂志文章

    doi:10.1128/JCM.33.8.2124-2130.1995

    authors: Secchiero P,Zella D,Crowley RW,Gallo RC,Lusso P

    更新日期:1995-08-01 00:00:00